RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 CTCFLQ8NI51 663 aaPredicted RBP5.53□□□□□ -1.52
SCN8A-213ENST00000637540 SPATA20Q8TB22 786 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 CCDC17Q96LX7 622 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 LZTS2Q9BRK4 669 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 ZMYND12Q9H0C1 365 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 HSD3B7Q9H2F3 369 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 CPVLQ9H3G5 476 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 KAT14Q9H8E8 782 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 ZNF287Q9HBT7 754 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 CABP5Q9NP86 173 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 BARHL2Q9NY43 387 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 SERPINB13Q9UIV8 391 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 PCDHA4Q9UN74 947 aa5.53□□□□□ -1.52
SCN8A-213ENST00000637540 GOLGB1Q14789 3259 aaKnown RBP5.52□□□□□ -1.53
SCN8A-213ENST00000637540 RBBP6Q7Z6E9 1792 aaKnown RBP5.52□□□□□ -1.53
SCN8A-213ENST00000637540 A0A087WWV3 80 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 ESYT2A0FGR8 921 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 SPDYE2BA6NHP3 402 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 TRIM75PA6NK02 468 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 KLRF2D3W0D1 207 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 NFKBIEO00221 500 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 PSMD14O00487 310 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 ACTN4O43707 911 aaKnown RBP5.52□□□□□ -1.53
SCN8A-213ENST00000637540 KINO60870 393 aaKnown RBP5.52□□□□□ -1.53
SCN8A-213ENST00000637540 PPP1R11O60927 126 aaPredicted RBP5.52□□□□□ -1.53
SCN8A-213ENST00000637540 SPDYE6P0CI01 402 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 CACNB3P54284 484 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 ZNF543Q08ER8 600 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 PICALMQ13492 652 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 NCAPHQ15003 741 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 E2F4Q16254 413 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 CFAP100Q494V2 611 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 TPRNQ4KMQ1 711 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 GALNT17Q6IS24 598 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 SARM1Q6SZW1 724 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 KRBA2Q6ZNG9 492 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 CCDC73Q6ZRK6 1079 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 PLA2G4DQ86XP0 818 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 CCDC125Q86Z20 511 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 CLEC10AQ8IUN9 316 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 DHX40Q8IX18 779 aaKnown RBP5.52□□□□□ -1.53
SCN8A-213ENST00000637540 AMOTL1Q8IY63 956 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 RTKN2Q8IZC4 609 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 BLIDQ8IZY5 108 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 JMYQ8N9B5 988 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 KRI1Q8N9T8 703 aaKnown RBP5.52□□□□□ -1.53
SCN8A-213ENST00000637540 MED15Q96RN5 788 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 BPIFA3Q9BQP9 254 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 DNAJC25Q9H1X3 360 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 DHX36Q9H2U1 1008 aaKnown RBP5.52□□□□□ -1.53
SCN8A-213ENST00000637540 NYAP2Q9P242 653 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 ZNF219Q9P2Y4 722 aaPredicted RBP5.52□□□□□ -1.53
SCN8A-213ENST00000637540 USP25Q9UHP3 1055 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 NOL7Q9UMY1 257 aaKnown RBP5.52□□□□□ -1.53
SCN8A-213ENST00000637540 PCDHA6Q9UN73 950 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 PCDHA8Q9Y5H6 950 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 PAPPA2Q9BXP8 1791 aa5.52□□□□□ -1.53
SCN8A-213ENST00000637540 PTPRFP10586 1907 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 ESPNB1AK53 854 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 FOXN1O15353 648 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 PPIP5K2O43314 1243 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 ADCY5O95622 1261 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 CAVIN2O95810 425 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 TTLL1O95922 423 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 BMP15O95972 392 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 PARP1P09874 1014 aaKnown RBP5.51□□□□□ -1.53
SCN8A-213ENST00000637540 GOLGA8HP0CJ92 632 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 XBP1P17861 261 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 CALML3P27482 149 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 CLCN1P35523 988 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 PTGER2P43116 358 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 SYKP43405 635 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 CLK2P49760 499 aaKnown RBP5.51□□□□□ -1.53
SCN8A-213ENST00000637540 ZNF165P49910 485 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 NLRP12P59046 1061 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 AKAP17AQ02040 695 aaKnown RBP5.51□□□□□ -1.53
SCN8A-213ENST00000637540 CXCL9Q07325 125 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 PTGDRQ13258 359 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 SPDYE2Q495Y8 402 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 ASPRV1Q53RT3 343 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 SPECC1Q5M775 1068 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 TTC38Q5R3I4 469 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 FKBP1CQ5VVH2 108 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 TTBK2Q6IQ55 1244 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 LUZP1Q86V48 1076 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 ERCC4Q92889 916 aaPredicted RBP5.51□□□□□ -1.53
SCN8A-213ENST00000637540 GPKOWQ92917 476 aaPredicted RBP eCLIP5.51□□□□□ -1.53
SCN8A-213ENST00000637540 PIGSQ96S52 555 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 CSRNP2Q9H175 543 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 TMX4Q9H1E5 349 aaPredicted RBP5.51□□□□□ -1.53
SCN8A-213ENST00000637540 TDRD3Q9H7E2 651 aaKnown RBP5.51□□□□□ -1.53
SCN8A-213ENST00000637540 JMJD4Q9H9V9 463 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 ZNF277Q9NRM2 450 aaPredicted RBP5.51□□□□□ -1.53
SCN8A-213ENST00000637540 ANO10Q9NW15 660 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 PI4KBQ9UBF8 816 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 KCNH3Q9ULD8 1083 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 STX8Q9UNK0 236 aa5.51□□□□□ -1.53
SCN8A-213ENST00000637540 LTBP3Q9NS15 1303 aa5.5□□□□□ -1.53
SCN8A-213ENST00000637540 DOCK1Q14185 1865 aa5.5□□□□□ -1.53
SCN8A-213ENST00000637540 FAM196BA6NMK8 535 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms