RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 FCER1AP12319 257 aa22.11■■□□□ 1.13
CLN6-220ENST00000637450 MKNK2Q9HBH9 465 aa22.11■■□□□ 1.13
CLN6-220ENST00000637450 PPP1R9AQ9ULJ8 1098 aa22.11■■□□□ 1.13
CLN6-220ENST00000637450 MINDY4BA8MYZ0 360 aa22.1■■□□□ 1.13
CLN6-220ENST00000637450 DNM1LO00429 736 aa22.1■■□□□ 1.13
CLN6-220ENST00000637450 VWA5AO00534 786 aa22.1■■□□□ 1.13
CLN6-220ENST00000637450 GPAA1O43292 621 aa22.1■■□□□ 1.13
CLN6-220ENST00000637450 RIOX2Q8IUF8 465 aa22.1■■□□□ 1.13
CLN6-220ENST00000637450 LRCH3Q96II8 777 aa22.1■■□□□ 1.13
CLN6-220ENST00000637450 MAML3Q96JK9 1138 aa22.1■■□□□ 1.13
CLN6-220ENST00000637450 NYAP2Q9P242 653 aa22.1■■□□□ 1.13
CLN6-220ENST00000637450 PCDHB15Q9Y5E8 787 aa22.1■■□□□ 1.13
CLN6-220ENST00000637450 A0A0G2JMZ2 1700 aa22.09■■□□□ 1.13
CLN6-220ENST00000637450 SEPT4O43236 478 aa22.09■■□□□ 1.13
CLN6-220ENST00000637450 RAD21O60216 631 aa22.09■■□□□ 1.13
CLN6-220ENST00000637450 GNAT2P19087 354 aa22.09■■□□□ 1.13
CLN6-220ENST00000637450 STAT3P40763 770 aa22.09■■□□□ 1.13
CLN6-220ENST00000637450 FAM83BQ5T0W9 1011 aa22.09■■□□□ 1.13
CLN6-220ENST00000637450 STK11IPQ8N1F8 1099 aa22.09■■□□□ 1.13
CLN6-220ENST00000637450 ARRDC4Q8NCT1 418 aa22.09■■□□□ 1.13
CLN6-220ENST00000637450 EPB41L4AQ9HCS5 686 aaPredicted RBP22.09■■□□□ 1.13
CLN6-220ENST00000637450 ROBO3Q96MS0 1386 aa22.09■■□□□ 1.13
CLN6-220ENST00000637450 TTC41PQ6P2S7 1318 aa22.08■■□□□ 1.13
CLN6-220ENST00000637450 PATL2C9JE40 543 aaKnown RBP22.08■■□□□ 1.13
CLN6-220ENST00000637450 M0R2C6 588 aa22.08■■□□□ 1.13
CLN6-220ENST00000637450 PRAMEF19Q5SWL8 479 aa22.08■■□□□ 1.13
CLN6-220ENST00000637450 REPS2Q8NFH8 660 aa22.08■■□□□ 1.13
CLN6-220ENST00000637450 ZNF214Q9UL59 606 aaPredicted RBP22.08■■□□□ 1.13
CLN6-220ENST00000637450 ZNF236Q9UL36 1845 aa22.08■■□□□ 1.12
CLN6-220ENST00000637450 LRRFIP1Q32MZ4 808 aaKnown RBP22.07■■□□□ 1.12
CLN6-220ENST00000637450 LRIT3Q3SXY7 679 aa22.07■■□□□ 1.12
CLN6-220ENST00000637450 GJC2Q5T442 439 aaPredicted RBP22.07■■□□□ 1.12
CLN6-220ENST00000637450 TDHQ8IZJ6 230 aa22.07■■□□□ 1.12
CLN6-220ENST00000637450 MMP19Q99542 508 aa22.07■■□□□ 1.12
CLN6-220ENST00000637450 UBE2OQ9C0C9 1292 aaKnown RBP22.07■■□□□ 1.12
CLN6-220ENST00000637450 MYH7P12883 1935 aa22.07■■□□□ 1.12
CLN6-220ENST00000637450 IGKV6D-41A0A0C4DH26 115 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 F5H6K3 240 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 ERC2O15083 957 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 APPP05067 770 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 TDO2P48775 406 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 ATN1P54259 1190 aaPredicted RBP22.06■■□□□ 1.12
CLN6-220ENST00000637450 KLRC3Q07444 240 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 ANO1Q5XXA6 986 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 IFNL3Q8IZI9 196 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 PI4K2BQ8TCG2 481 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 ZNF287Q9HBT7 754 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 CLIP2Q9UDT6 1046 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 MYH8P13535 1937 aa22.06■■□□□ 1.12
CLN6-220ENST00000637450 PGK2P07205 417 aa22.05■■□□□ 1.12
CLN6-220ENST00000637450 COPB2P35606 906 aa22.05■■□□□ 1.12
CLN6-220ENST00000637450 KCTD2Q14681 263 aa22.05■■□□□ 1.12
CLN6-220ENST00000637450 ZNF792Q3KQV3 632 aa22.05■■□□□ 1.12
CLN6-220ENST00000637450 GPR153Q6NV75 609 aa22.05■■□□□ 1.12
CLN6-220ENST00000637450 ZNF444Q8N0Y2 327 aaPredicted RBP22.05■■□□□ 1.12
CLN6-220ENST00000637450 OTUD7AQ8TE49 926 aaPredicted RBP22.05■■□□□ 1.12
CLN6-220ENST00000637450 MKL1Q969V6 931 aa22.05■■□□□ 1.12
CLN6-220ENST00000637450 NUP88Q99567 741 aaPredicted RBP22.05■■□□□ 1.12
CLN6-220ENST00000637450 SLF1Q9BQI6 1058 aa22.05■■□□□ 1.12
CLN6-220ENST00000637450 NRBP1Q9UHY1 535 aa22.05■■□□□ 1.12
CLN6-220ENST00000637450 DIS3Q9Y2L1 958 aaKnown RBP22.05■■□□□ 1.12
CLN6-220ENST00000637450 PRDM1O75626 825 aa22.04■■□□□ 1.12
CLN6-220ENST00000637450 NDUFB10O96000 172 aa22.04■■□□□ 1.12
CLN6-220ENST00000637450 SEC62Q99442 399 aaKnown RBP22.04■■□□□ 1.12
CLN6-220ENST00000637450 KBTBD13C9JR72 458 aa22.03■■□□□ 1.12
CLN6-220ENST00000637450 MDM2Q00987 491 aaPredicted RBP22.03■■□□□ 1.12
CLN6-220ENST00000637450 PRPF38AQ8NAV1 312 aaKnown RBP22.03■■□□□ 1.12
CLN6-220ENST00000637450 TINF2Q9BSI4 451 aa22.03■■□□□ 1.12
CLN6-220ENST00000637450 NACAP1Q9BZK3 213 aa22.03■■□□□ 1.12
CLN6-220ENST00000637450 MTMR4Q9NYA4 1195 aa22.03■■□□□ 1.12
CLN6-220ENST00000637450 RTP1P59025 263 aa22.02■■□□□ 1.12
CLN6-220ENST00000637450 LRRC41Q15345 812 aa22.02■■□□□ 1.12
CLN6-220ENST00000637450 ZMYM1Q5SVZ6 1142 aa22.02■■□□□ 1.12
CLN6-220ENST00000637450 SLC39A5Q6ZMH5 540 aa22.02■■□□□ 1.12
CLN6-220ENST00000637450 CEP95Q96GE4 821 aa22.02■■□□□ 1.12
CLN6-220ENST00000637450 TEX13BQ9BXU2 312 aa22.02■■□□□ 1.12
CLN6-220ENST00000637450 SYNPO2Q9UMS6 1093 aa22.02■■□□□ 1.12
CLN6-220ENST00000637450 FAM47AQ5JRC9 791 aa22.01■■□□□ 1.11
CLN6-220ENST00000637450 SNRNP48Q6IEG0 339 aaKnown RBP22.01■■□□□ 1.11
CLN6-220ENST00000637450 FSD1Q9BTV5 496 aa22.01■■□□□ 1.11
CLN6-220ENST00000637450 RIPK3Q9Y572 518 aa22.01■■□□□ 1.11
CLN6-220ENST00000637450 GREB1LQ9C091 1923 aaPredicted RBP22.01■■□□□ 1.11
CLN6-220ENST00000637450 PARP14Q460N5 1801 aa22.01■■□□□ 1.11
CLN6-220ENST00000637450 FRMPD3Q5JV73 1810 aa22.01■■□□□ 1.11
CLN6-220ENST00000637450 ATP2A1O14983 1001 aa22■■□□□ 1.11
CLN6-220ENST00000637450 ZBED4O75132 1171 aa22■■□□□ 1.11
CLN6-220ENST00000637450 TTLL1O95922 423 aa22■■□□□ 1.11
CLN6-220ENST00000637450 MYCNP04198 464 aaPredicted RBP22■■□□□ 1.11
CLN6-220ENST00000637450 TAL1P17542 331 aaPredicted RBP22■■□□□ 1.11
CLN6-220ENST00000637450 MX1P20591 662 aa22■■□□□ 1.11
CLN6-220ENST00000637450 NEDD1Q8NHV4 660 aa22■■□□□ 1.11
CLN6-220ENST00000637450 ATP11BQ9Y2G3 1177 aa22■■□□□ 1.11
CLN6-220ENST00000637450 COL6A3P12111 3177 aa21.99■■□□□ 1.11
CLN6-220ENST00000637450 ZNF865P0CJ78 1059 aaPredicted RBP21.99■■□□□ 1.11
CLN6-220ENST00000637450 RARBP10826 455 aa21.99■■□□□ 1.11
CLN6-220ENST00000637450 ADCYAP1R1P41586 468 aa21.99■■□□□ 1.11
CLN6-220ENST00000637450 RRP1P56182 461 aaKnown RBP21.99■■□□□ 1.11
CLN6-220ENST00000637450 PDE4BQ07343 736 aa21.99■■□□□ 1.11
CLN6-220ENST00000637450 SNX17Q15036 470 aa21.99■■□□□ 1.11
CLN6-220ENST00000637450 GMCL1P1Q8NEA9 526 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms