RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SH3GLB2Q9NR46 395 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 hCG_1984214I3L0E3 225 aa17.73■□□□□ 0.43
CLN6-219ENST00000637329 FOSBP53539 338 aa17.73■□□□□ 0.43
CLN6-219ENST00000637329 GUCY1B3Q02153 619 aa17.73■□□□□ 0.43
CLN6-219ENST00000637329 RRP1BQ14684 758 aaKnown RBP17.73■□□□□ 0.43
CLN6-219ENST00000637329 USP50Q70EL3 339 aaPredicted RBP17.73■□□□□ 0.43
CLN6-219ENST00000637329 CCDC82Q8N4S0 544 aa17.73■□□□□ 0.43
CLN6-219ENST00000637329 ZNF713Q8N859 430 aaPredicted RBP17.73■□□□□ 0.43
CLN6-219ENST00000637329 GMCL1Q96IK5 515 aa17.73■□□□□ 0.43
CLN6-219ENST00000637329 ANP32EQ9BTT0 268 aa17.73■□□□□ 0.43
CLN6-219ENST00000637329 ELP1O95163 1332 aa17.72■□□□□ 0.43
CLN6-219ENST00000637329 USP17L5A8MUK1 530 aa17.72■□□□□ 0.43
CLN6-219ENST00000637329 U2AF2P26368 475 aaKnown RBP eCLIP17.72■□□□□ 0.43
CLN6-219ENST00000637329 HIRAP54198 1017 aaPredicted RBP17.72■□□□□ 0.43
CLN6-219ENST00000637329 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
CLN6-219ENST00000637329 DNM1Q05193 864 aaKnown RBP17.72■□□□□ 0.43
CLN6-219ENST00000637329 USP17L2Q6R6M4 530 aa17.72■□□□□ 0.43
CLN6-219ENST00000637329 ZNF396Q96N95 335 aaPredicted RBP17.72■□□□□ 0.43
CLN6-219ENST00000637329 ZNF341Q9BYN7 854 aa17.72■□□□□ 0.43
CLN6-219ENST00000637329 SCAND2PQ9GZW5 306 aaPredicted RBP17.72■□□□□ 0.43
CLN6-219ENST00000637329 BRMS1Q9HCU9 246 aa17.72■□□□□ 0.43
CLN6-219ENST00000637329 CFAP45Q9UL16 551 aa17.72■□□□□ 0.43
CLN6-219ENST00000637329 V9GY48 417 aaPredicted RBP17.72■□□□□ 0.43
CLN6-219ENST00000637329 SSC5DA1L4H1 1573 aa17.71■□□□□ 0.43
CLN6-219ENST00000637329 IQCA1LA6NCM1 817 aa17.71■□□□□ 0.43
CLN6-219ENST00000637329 PHF20L1A8MW92 1017 aa17.71■□□□□ 0.43
CLN6-219ENST00000637329 CTNND1O60716 968 aaKnown RBP17.71■□□□□ 0.43
CLN6-219ENST00000637329 SHROOM1Q2M3G4 852 aaPredicted RBP17.71■□□□□ 0.43
CLN6-219ENST00000637329 SIAH1Q8IUQ4 282 aa17.71■□□□□ 0.43
CLN6-219ENST00000637329 CCDC148Q8NFR7 591 aa17.71■□□□□ 0.43
CLN6-219ENST00000637329 ZC3H15Q8WU90 426 aaKnown RBP17.71■□□□□ 0.43
CLN6-219ENST00000637329 RRP36Q96EU6 259 aaKnown RBP17.71■□□□□ 0.43
CLN6-219ENST00000637329 PHF20Q9BVI0 1012 aa17.71■□□□□ 0.43
CLN6-219ENST00000637329 FOXP1Q9H334 677 aaPredicted RBP17.71■□□□□ 0.43
CLN6-219ENST00000637329 RIOX1Q9H6W3 641 aa17.71■□□□□ 0.43
CLN6-219ENST00000637329 LMBRD1Q9NUN5 540 aa17.71■□□□□ 0.43
CLN6-219ENST00000637329 SEC63Q9UGP8 760 aaKnown RBP17.71■□□□□ 0.43
CLN6-219ENST00000637329 TMX2Q9Y320 296 aa17.71■□□□□ 0.43
CLN6-219ENST00000637329 PAPPA2Q9BXP8 1791 aa17.71■□□□□ 0.43
CLN6-219ENST00000637329 UBE2Q2LH0YL09 131 aa17.7■□□□□ 0.42
CLN6-219ENST00000637329 CYTH3O43739 400 aa17.7■□□□□ 0.42
CLN6-219ENST00000637329 NCLP19338 710 aaKnown RBP17.7■□□□□ 0.42
CLN6-219ENST00000637329 JAG1P78504 1218 aa17.7■□□□□ 0.42
CLN6-219ENST00000637329 GNL2Q13823 731 aaKnown RBP17.7■□□□□ 0.42
CLN6-219ENST00000637329 CCDC96Q2M329 555 aa17.7■□□□□ 0.42
CLN6-219ENST00000637329 OTUD7BQ6GQQ9 843 aa17.7■□□□□ 0.42
CLN6-219ENST00000637329 MIGA2Q7L4E1 593 aa17.7■□□□□ 0.42
CLN6-219ENST00000637329 CCDC12Q8WUD4 166 aaPredicted RBP17.7■□□□□ 0.42
CLN6-219ENST00000637329 GOPCQ9HD26 462 aa17.7■□□□□ 0.42
CLN6-219ENST00000637329 ZNF112Q9UJU3 913 aa17.7■□□□□ 0.42
CLN6-219ENST00000637329 MTMR7Q9Y216 660 aa17.7■□□□□ 0.42
CLN6-219ENST00000637329 CNPY2Q9Y2B0 182 aa17.7■□□□□ 0.42
CLN6-219ENST00000637329 MBD3O95983 291 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 GOLGA8HP0CJ92 632 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 CALML3P27482 149 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 SLC1A4P43007 532 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 SLC35G1Q2M3R5 365 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 SUPT20HL1Q3ZLR7 823 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 NBPF12Q5TAG4 269 aaPredicted RBP17.69■□□□□ 0.42
CLN6-219ENST00000637329 MYSM1Q5VVJ2 828 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 SLFN13Q68D06 897 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 GALNT17Q6IS24 598 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 RASGRP2Q7LDG7 609 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 NOSTRINQ8IVI9 506 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 DIS3L2Q8IYB7 885 aaKnown RBP17.69■□□□□ 0.42
CLN6-219ENST00000637329 DCPSQ96C86 337 aaKnown RBP17.69■□□□□ 0.42
CLN6-219ENST00000637329 ABHD8Q96I13 439 aa17.69■□□□□ 0.42
CLN6-219ENST00000637329 KIF28PB7ZC32 967 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 F5H6K3 240 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 FIBPO43427 364 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 KRT2P35908 639 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 KLRC3Q07444 240 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 KLHL40Q2TBA0 621 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 FOXD4L6Q3SYB3 417 aaPredicted RBP17.68■□□□□ 0.42
CLN6-219ENST00000637329 CHADLQ6NUI6 762 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 PPP1R18Q6NYC8 613 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 FOXD4L3Q6VB84 417 aaPredicted RBP17.68■□□□□ 0.42
CLN6-219ENST00000637329 USP48Q86UV5 1035 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 SULF1Q8IWU6 871 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 DAGLBQ8NCG7 672 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 GJB4Q9NTQ9 266 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 BARHL2Q9NY43 387 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 VPS54Q9P1Q0 977 aa17.68■□□□□ 0.42
CLN6-219ENST00000637329 FRMPD2Q68DX3 1309 aaPredicted RBP17.68■□□□□ 0.42
CLN6-219ENST00000637329 TRAK2O60296 914 aa17.67■□□□□ 0.42
CLN6-219ENST00000637329 PRPF40AO75400 957 aaKnown RBP17.67■□□□□ 0.42
CLN6-219ENST00000637329 NDUFB10O96000 172 aa17.67■□□□□ 0.42
CLN6-219ENST00000637329 EPHX2P34913 555 aa17.67■□□□□ 0.42
CLN6-219ENST00000637329 MTMR8Q96EF0 704 aa17.67■□□□□ 0.42
CLN6-219ENST00000637329 CHAMP1Q96JM3 812 aa17.67■□□□□ 0.42
CLN6-219ENST00000637329 VCPKMTQ9H867 229 aa17.67■□□□□ 0.42
CLN6-219ENST00000637329 POLR3EQ9NVU0 708 aa17.67■□□□□ 0.42
CLN6-219ENST00000637329 hCG_1642624A0A1W2PR95 340 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 A0A1W2PRG0 241 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 ESYT2A0FGR8 921 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 STXBP3O00186 592 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 LBX1P52954 281 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 UBE2HP62256 183 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 NOL9Q5SY16 702 aaKnown RBP17.66■□□□□ 0.42
CLN6-219ENST00000637329 WWC2Q6AWC2 1192 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms