RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.2
CLN8-212ENST00000637083 LAD1O00515 517 aa13.77□□□□□ -0.21
CLN8-212ENST00000637083 ZNF18P17022 549 aa13.77□□□□□ -0.21
CLN8-212ENST00000637083 C16orf86Q6ZW13 317 aa13.77□□□□□ -0.21
CLN8-212ENST00000637083 USP49Q70CQ1 688 aa13.77□□□□□ -0.21
CLN8-212ENST00000637083 MAPKAPK5Q8IW41 473 aa13.77□□□□□ -0.21
CLN8-212ENST00000637083 RMND1Q9NWS8 449 aa13.77□□□□□ -0.21
CLN8-212ENST00000637083 MAD2L2Q9UI95 211 aa13.77□□□□□ -0.21
CLN8-212ENST00000637083 SUGT1Q9Y2Z0 365 aa13.77□□□□□ -0.21
CLN8-212ENST00000637083 PALM3A6NDB9 673 aaPredicted RBP13.76□□□□□ -0.21
CLN8-212ENST00000637083 ZSCAN12O43309 604 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 AFMP43652 599 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 DPYDQ12882 1025 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 SEMA3FQ13275 785 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 KRT27Q7Z3Y8 459 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 PROM2Q8N271 834 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 NEDD1Q8NHV4 660 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 ZNF592Q92610 1267 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 STX8Q9UNK0 236 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 RASA1P20936 1047 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 MCM7P33993 719 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 FILIP1LQ4L180 1135 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 MFSD14BQ5SR56 506 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 SPECC1LQ69YQ0 1117 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 DPF2Q92785 391 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 EYA3Q99504 573 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 TMEM47Q9BQJ4 181 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 TRMT1Q9NXH9 659 aaKnown RBP13.76□□□□□ -0.21
CLN8-212ENST00000637083 BARHL2Q9NY43 387 aa13.76□□□□□ -0.21
CLN8-212ENST00000637083 FAM205AQ6ZU69 1335 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 KLRG2A4D1S0 409 aaPredicted RBP13.75□□□□□ -0.21
CLN8-212ENST00000637083 USP27XA6NNY8 438 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 ARHGAP6O43182 974 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 GTPBP6O43824 516 aaPredicted RBP13.75□□□□□ -0.21
CLN8-212ENST00000637083 CDK8P49336 464 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 DDR1Q08345 913 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 SP8Q8IXZ3 490 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 GRAMD1CQ8IYS0 662 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 TBC1D16Q8TBP0 767 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 TMX1Q9H3N1 280 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 UBR3Q6ZT12 1888 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 GAKO14976 1311 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 SYNRGQ9UMZ2 1314 aa13.75□□□□□ -0.21
CLN8-212ENST00000637083 USP17L3A6NCW0 530 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 USP17L4A6NCW7 530 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 GOLGA6L9A6NEM1 432 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 C6orf229H3BNL8 230 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 hCG_1984214I3L0E3 225 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 MYL1P05976 194 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 PARP1P09874 1014 aaKnown RBP13.74□□□□□ -0.21
CLN8-212ENST00000637083 GNA11P29992 359 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 FMR1Q06787 632 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLN8-212ENST00000637083 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 E4F1Q66K89 784 aaPredicted RBP13.74□□□□□ -0.21
CLN8-212ENST00000637083 DTHD1Q6ZMT9 781 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 USP17L1Q7RTZ2 530 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 STAG2Q8N3U4 1231 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 ZNF713Q8N859 430 aaPredicted RBP13.74□□□□□ -0.21
CLN8-212ENST00000637083 PPP1R13BQ96KQ4 1090 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 FLT1P17948 1338 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 A0A087X0B3 334 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
CLN8-212ENST00000637083 SPAG1Q07617 926 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 ORC2Q13416 577 aaPredicted RBP13.74□□□□□ -0.21
CLN8-212ENST00000637083 E2F4Q16254 413 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 ZNF827Q17R98 1081 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 KRT25Q7Z3Z0 450 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 HEATR3Q7Z4Q2 680 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 ANKRD20A12PQ8NF67 263 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 COA1Q9GZY4 146 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 C6orf50Q9HD87 102 aa13.74□□□□□ -0.21
CLN8-212ENST00000637083 SEC63Q9UGP8 760 aaKnown RBP13.74□□□□□ -0.21
CLN8-212ENST00000637083 SAP30BPQ9UHR5 308 aaKnown RBP13.74□□□□□ -0.21
CLN8-212ENST00000637083 KLRF2D3W0D1 207 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 STX10O60499 249 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 PRPHP41219 470 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 TBX2Q13207 712 aaPredicted RBP13.73□□□□□ -0.21
CLN8-212ENST00000637083 TXNRD1Q16881 649 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 SOGA3Q5TF21 947 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 WWC2Q6AWC2 1192 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 GPKOWQ92917 476 aaPredicted RBP eCLIP13.73□□□□□ -0.21
CLN8-212ENST00000637083 RRP36Q96EU6 259 aaKnown RBP13.73□□□□□ -0.21
CLN8-212ENST00000637083 TMX4Q9H1E5 349 aaPredicted RBP13.73□□□□□ -0.21
CLN8-212ENST00000637083 POLLQ9UGP5 575 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 PCDHA6Q9UN73 950 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 PCDHA8Q9Y5H6 950 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 A0A1B0GTH6 734 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 M0R2N6 131 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 STXBP3O00186 592 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 WNT7AO00755 349 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 PPEF1O14829 653 aaPredicted RBP13.73□□□□□ -0.21
CLN8-212ENST00000637083 CUL4BQ13620 913 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 NR1I3Q14994 352 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 NOM1Q5C9Z4 860 aaKnown RBP13.73□□□□□ -0.21
CLN8-212ENST00000637083 C4orf32Q8N8J7 132 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 ANKRD7Q92527 254 aa13.73□□□□□ -0.21
CLN8-212ENST00000637083 GTPBP4Q9BZE4 634 aaKnown RBP13.73□□□□□ -0.21
CLN8-212ENST00000637083 ZMYND12Q9H0C1 365 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms