RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 ENOX1Q8TC92 643 aaKnown RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 ZNF622Q969S3 477 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 SHISA4Q96DD7 197 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 ACSBG1Q96GR2 724 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 IQSEC3Q9UPP2 1182 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 SH3BP1Q9Y3L3 701 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 LRRC37AA6NMS7 1700 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 DUOX1Q9NRD9 1551 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 NBPF26B4DH59 902 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 AKR1B15C9JRZ8 316 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 ADD2P35612 726 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 PPP2R3AQ06190 1150 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 BRD3Q15059 726 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 PUM3Q15397 648 aaKnown RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 FBXO38Q6PIJ6 1188 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 APOA5Q6Q788 366 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 LEKR1Q6ZMV7 388 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 ZNF579Q8NAF0 562 aaKnown RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 EYA3Q99504 573 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 ISCA1Q9BUE6 129 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 UTP14AQ9BVJ6 771 aaKnown RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 FOXP1Q9H334 677 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 RAI14Q9P0K7 980 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 PRKAG2Q9UGJ0 569 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 TTF2Q9UNY4 1162 aaKnown RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 HPS5Q9UPZ3 1129 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 MROH5Q6ZUA9 1318 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 CYP27B1O15528 508 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 FMNL1O95466 1100 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 TERF2Q15554 542 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 MAP9Q49MG5 647 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 KMT5BQ4FZB7 885 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 RRP12Q5JTH9 1297 aaKnown RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 TTLL7Q6ZT98 887 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 EHBP1Q8NDI1 1231 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 CCDC12Q8WUD4 166 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 LPIN2Q92539 896 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 RABGGTAQ92696 567 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 FERMT2Q96AC1 680 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 MASTLQ96GX5 879 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 ZNF594Q96JF6 807 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 BRIP1Q9BX63 1249 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 RBM28Q9NW13 759 aaKnown RBP4.51□□□□□ -1.69
SCN1A-214ENST00000637038 PPP2R2CQ9Y2T4 447 aa4.51□□□□□ -1.69
SCN1A-214ENST00000637038 SIPA1L1O43166 1804 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 SCN4AP35499 1836 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 FAM237AA0A1B0GTK4 181 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 USP27XA6NNY8 438 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 DCDC2CA8MYV0 355 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 IRF6O14896 467 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 SEMA3EO15041 775 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 IFNAR1P17181 557 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 IGHMBP2P38935 993 aaKnown RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 PLCD1P51178 756 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 IRX3P78415 501 aaPredicted RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 ARID5BQ14865 1188 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 ERCC6LQ2NKX8 1250 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 E4F1Q66K89 784 aaPredicted RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 ARMCX5Q6P1M9 558 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 CATIPQ7Z7H3 387 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 SGMS1Q86VZ5 419 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 SULF1Q8IWU6 871 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 CCDC148Q8NFR7 591 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 RASSF8Q8NHQ8 419 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 ESR2Q92731 530 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 CFHR5Q9BXR6 569 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 MAGEC2Q9UBF1 373 aaPredicted RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 TRMT112Q9UI30 125 aaKnown RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 B4E1Z4 1266 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 A1BGP04217 495 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 BMP8BP34820 402 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 SOX10P56693 466 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 SETQ01105 290 aaPredicted RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 PNOCQ13519 176 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 AXDND1Q5T1B0 1012 aaPredicted RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 IQCA1Q86XH1 822 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 DIS3L2Q8IYB7 885 aaKnown RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 ZCCHC17Q9NP64 241 aaKnown RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 ZNHIT6Q9NWK9 470 aaKnown RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 NFE2L3Q9Y4A8 694 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 CCDC88AQ3V6T2 1871 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 CTAGE9A4FU28 777 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 PDE8AO60658 829 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 PCP11498 1178 aaKnown RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 PDE6AP16499 860 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 ITGA6P23229 1130 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 KRT2P35908 639 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 CTSWP56202 376 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 KIF4BQ2VIQ3 1234 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 AKNAD1Q5T1N1 836 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 RAB11FIP4Q86YS3 637 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 AMOTL1Q8IY63 956 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 FAM177A1Q8N128 213 aaPredicted RBP4.5□□□□□ -1.69
SCN1A-214ENST00000637038 NUP133Q8WUM0 1156 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 DPF3Q92784 378 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 PANX2Q96RD6 677 aa4.5□□□□□ -1.69
SCN1A-214ENST00000637038 LBHD1Q9BQE6 289 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms