RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	C8orf74	Q6P047	294 aa		6	□□□□□ -1.45
RYR3-223	ENST00000636845	UBE3B	Q7Z3V4	1068 aa		6	□□□□□ -1.45
RYR3-223	ENST00000636845	SMYD4	Q8IYR2	804 aa	Predicted RBP	6	□□□□□ -1.45
RYR3-223	ENST00000636845	TSEN2	Q8NCE0	465 aa	Known RBP	6	□□□□□ -1.45
RYR3-223	ENST00000636845	MAGEC3	Q8TD91	643 aa		6	□□□□□ -1.45
RYR3-223	ENST00000636845	HDAC7	Q8WUI4	952 aa		6	□□□□□ -1.45
RYR3-223	ENST00000636845	NSMCE1	Q8WV22	266 aa		6	□□□□□ -1.45
RYR3-223	ENST00000636845	RBM33	Q96EV2	1170 aa	Known RBP	6	□□□□□ -1.45
RYR3-223	ENST00000636845	CYFIP2	Q96F07	1278 aa		6	□□□□□ -1.45
RYR3-223	ENST00000636845	CCDC97	Q96F63	343 aa	Predicted RBP	6	□□□□□ -1.45
RYR3-223	ENST00000636845	PAGR1	Q9BTK6	254 aa		6	□□□□□ -1.45
RYR3-223	ENST00000636845	IRAK4	Q9NWZ3	460 aa		6	□□□□□ -1.45
RYR3-223	ENST00000636845	TAB2	Q9NYJ8	693 aa		6	□□□□□ -1.45
RYR3-223	ENST00000636845	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	6	□□□□□ -1.45
RYR3-223	ENST00000636845	CRYBG1	Q9Y4K1	1723 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	SH3TC1	Q8TE82	1336 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	ANO9	A1A5B4	782 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	HOXB7	P09629	217 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	RXRA	P19793	462 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	SARS	P49591	514 aa	Known RBP	5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	NEXN	Q0ZGT2	675 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	KCNB1	Q14721	858 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	KRT31	Q15323	416 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	PPP1R7	Q15435	360 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	WASHC4	Q2M389	1173 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	NT5DC1	Q5TFE4	455 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	HIBCH	Q6NVY1	386 aa	Predicted RBP	5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	PNMA8A	Q86V59	439 aa	Predicted RBP	5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	CACNA2D3	Q8IZS8	1091 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	FNBP4	Q8N3X1	1017 aa	Predicted RBP	5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	RASSF8	Q8NHQ8	419 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	NCOA7	Q8NI08	942 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	CCDC26	Q8TAB7	109 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	LMBR1	Q8WVP7	490 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	IFT81	Q8WYA0	676 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	PHKB	Q93100	1093 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	PSMB7	Q99436	277 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	MAP3K14	Q99558	947 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	HAUS7	Q99871	368 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	ESF1	Q9H501	851 aa	Known RBP	5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	STIM2	Q9P246	746 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	GGA2	Q9UJY4	613 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	CTNND2	Q9UQB3	1225 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	DLC1	Q96QB1	1528 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	FLT4	P35916	1363 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	IGSF1	Q8N6C5	1336 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	COBL	O75128	1261 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	AP1G2	O75843	785 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	IARS	P41252	1262 aa	Known RBP	5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	ICA1	Q05084	483 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	APTX	Q7Z2E3	356 aa	Known RBP	5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	RIC3	Q7Z5B4	369 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	MICU3	Q86XE3	530 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	MMGT1	Q8N4V1	131 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	SPATA4	Q8NEY3	305 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	PARD3B	Q8TEW8	1205 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	CCDC47	Q96A33	483 aa	Known RBP	5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	SPAG5	Q96R06	1193 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	NUCKS1	Q9H1E3	243 aa	Known RBP	5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	PAG1	Q9NWQ8	432 aa		5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
RYR3-223	ENST00000636845	KDR	P35968	1356 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	ACE	P12821	1306 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	EME2	A4GXA9	379 aa	Predicted RBP	5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	GMNC	A6NCL1	334 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	TACC1	O75410	805 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	SNUPN	O95149	360 aa	Known RBP	5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	FECH	P22830	423 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	COPB1	P53618	953 aa	Known RBP	5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	PPARA	Q07869	468 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	TTF1	Q15361	905 aa	Predicted RBP	5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	SPA17	Q15506	151 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	CCDC96	Q2M329	555 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	CDKAL1	Q5VV42	579 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	NFXL1	Q6ZNB6	911 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	CPLX4	Q7Z7G2	160 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	FAM228A	Q86W67	206 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	IFT20	Q8IY31	132 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	MAB21L3	Q8N8X9	362 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	RUBCN	Q92622	972 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	VTI1A	Q96AJ9	217 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	ATP6V1G3	Q96LB4	118 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	PCMTD1	Q96MG8	357 aa	Predicted RBP	5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	YIPF3	Q9GZM5	350 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	NOD2	Q9HC29	1040 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	HPS5	Q9UPZ3	1129 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	REXO2	Q9Y3B8	237 aa	Known RBP	5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	KDM6A	O15550	1401 aa	Predicted RBP	5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	RFX7	Q2KHR2	1363 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845		A6NJR5	290 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	BTBD11	A6QL63	1104 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	HMGB1P1	B2RPK0	211 aa	Predicted RBP	5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	RNF225	M0QZC1	329 aa	Predicted RBP	5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	DNM1L	O00429	736 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	OPLAH	O14841	1288 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	USO1	O60763	962 aa	Known RBP	5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	CLTA	P09496	248 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	SCTR	P47872	440 aa		5.98	□□□□□ -1.45
RYR3-223	ENST00000636845	GUCY2F	P51841	1108 aa		5.98	□□□□□ -1.45

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