RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 CDH23Q9H251 3354 aa19.23■□□□□ 0.67
CACNA1A-229ENST00000636670 MPHOSPH10O00566 681 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-229ENST00000636670 AKR1B1P15121 316 aa19.22■□□□□ 0.67
CACNA1A-229ENST00000636670 RASA1P20936 1047 aa19.22■□□□□ 0.67
CACNA1A-229ENST00000636670 GUCY1A2P33402 732 aa19.22■□□□□ 0.67
CACNA1A-229ENST00000636670 BACE1P56817 501 aa19.22■□□□□ 0.67
CACNA1A-229ENST00000636670 SMAD3P84022 425 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-229ENST00000636670 PDE4BQ07343 736 aa19.22■□□□□ 0.67
CACNA1A-229ENST00000636670 MTMR2Q13614 643 aa19.22■□□□□ 0.67
CACNA1A-229ENST00000636670 RAB3GAP1Q15042 981 aa19.22■□□□□ 0.67
CACNA1A-229ENST00000636670 C19orf81C9J6K1 198 aa19.21■□□□□ 0.67
CACNA1A-229ENST00000636670 USP17L10C9JJH3 530 aa19.21■□□□□ 0.67
CACNA1A-229ENST00000636670 FGAP02671 866 aa19.21■□□□□ 0.67
CACNA1A-229ENST00000636670 HMGCS2P54868 508 aa19.21■□□□□ 0.67
CACNA1A-229ENST00000636670 SEPT2Q15019 361 aa19.21■□□□□ 0.67
CACNA1A-229ENST00000636670 SHHQ15465 462 aa19.21■□□□□ 0.67
CACNA1A-229ENST00000636670 IL25Q9H293 177 aa19.21■□□□□ 0.67
CACNA1A-229ENST00000636670 MKNK2Q9HBH9 465 aa19.21■□□□□ 0.67
CACNA1A-229ENST00000636670 RLFQ13129 1914 aa19.2■□□□□ 0.66
CACNA1A-229ENST00000636670 SGSM2O43147 1006 aa19.2■□□□□ 0.66
CACNA1A-229ENST00000636670 CYP2B6P20813 491 aa19.2■□□□□ 0.66
CACNA1A-229ENST00000636670 ICA1Q05084 483 aa19.2■□□□□ 0.66
CACNA1A-229ENST00000636670 LHX8Q68G74 356 aa19.2■□□□□ 0.66
CACNA1A-229ENST00000636670 C12orf42Q96LP6 360 aa19.2■□□□□ 0.66
CACNA1A-229ENST00000636670 FEZ1Q99689 392 aa19.2■□□□□ 0.66
CACNA1A-229ENST00000636670 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.2■□□□□ 0.66
CACNA1A-229ENST00000636670 PCP11498 1178 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-229ENST00000636670 XRCC5P13010 732 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-229ENST00000636670 USP14P54578 494 aa19.19■□□□□ 0.66
CACNA1A-229ENST00000636670 TREML2Q5T2D2 321 aa19.19■□□□□ 0.66
CACNA1A-229ENST00000636670 TRMT44Q8IYL2 757 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-229ENST00000636670 KIAA1683Q9H0B3 1180 aa19.19■□□□□ 0.66
CACNA1A-229ENST00000636670 SH2D4AQ9H788 454 aa19.19■□□□□ 0.66
CACNA1A-229ENST00000636670 ARHGEF10LQ9HCE6 1279 aa19.19■□□□□ 0.66
CACNA1A-229ENST00000636670 TMOD4Q9NZQ9 345 aa19.19■□□□□ 0.66
CACNA1A-229ENST00000636670 PABPC4Q13310 644 aaKnown RBP eCLIP19.18■□□□□ 0.66
CACNA1A-229ENST00000636670 USP17L2Q6R6M4 530 aa19.18■□□□□ 0.66
CACNA1A-229ENST00000636670 STK11IPQ8N1F8 1099 aa19.18■□□□□ 0.66
CACNA1A-229ENST00000636670 SENP6Q9GZR1 1112 aaPredicted RBP19.18■□□□□ 0.66
CACNA1A-229ENST00000636670 ORC4O43929 436 aa19.17■□□□□ 0.66
CACNA1A-229ENST00000636670 PRDM1O75626 825 aa19.17■□□□□ 0.66
CACNA1A-229ENST00000636670 FGRP09769 529 aa19.17■□□□□ 0.66
CACNA1A-229ENST00000636670 CTDSPL2Q05D32 466 aa19.17■□□□□ 0.66
CACNA1A-229ENST00000636670 CACNB2Q08289 660 aaPredicted RBP19.17■□□□□ 0.66
CACNA1A-229ENST00000636670 ZNF444Q8N0Y2 327 aaPredicted RBP19.17■□□□□ 0.66
CACNA1A-229ENST00000636670 NUDT12Q9BQG2 462 aa19.17■□□□□ 0.66
CACNA1A-229ENST00000636670 KANSL2Q9H9L4 492 aa19.17■□□□□ 0.66
CACNA1A-229ENST00000636670 CTNNA3Q9UI47 895 aa19.17■□□□□ 0.66
CACNA1A-229ENST00000636670 COL11A1P12107 1806 aaPredicted RBP19.16■□□□□ 0.66
CACNA1A-229ENST00000636670 IGKV6D-41A0A0C4DH26 115 aa19.16■□□□□ 0.66
CACNA1A-229ENST00000636670 CDC45O75419 566 aa19.16■□□□□ 0.66
CACNA1A-229ENST00000636670 NT5C2P49902 561 aa19.16■□□□□ 0.66
CACNA1A-229ENST00000636670 C9orf50Q5SZB4 431 aa19.16■□□□□ 0.66
CACNA1A-229ENST00000636670 CLEC10AQ8IUN9 316 aa19.16■□□□□ 0.66
CACNA1A-229ENST00000636670 ACER1Q8TDN7 264 aa19.16■□□□□ 0.66
CACNA1A-229ENST00000636670 STAG1Q8WVM7 1258 aa19.16■□□□□ 0.66
CACNA1A-229ENST00000636670 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.16■□□□□ 0.66
CACNA1A-229ENST00000636670 RNF41Q9H4P4 317 aaPredicted RBP19.16■□□□□ 0.66
CACNA1A-229ENST00000636670 TSPY3P0CV98 308 aa19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 TSPY8P0CW00 308 aa19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 CCND3P30281 292 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 HAND2P61296 217 aa19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 IMMTQ16891 758 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 CASC1Q6TDU7 716 aa19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 TBC1D10CQ8IV04 446 aa19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 USP38Q8NB14 1042 aa19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 NEDD1Q8NHV4 660 aa19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 ATXN2LQ8WWM7 1075 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 SOCS4Q8WXH5 440 aa19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 ESYT1Q9BSJ8 1104 aa19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 TMX2Q9Y320 296 aa19.15■□□□□ 0.66
CACNA1A-229ENST00000636670 PLXNB2O15031 1838 aa19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 A0A1W2PRG0 241 aa19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 ZNF213O14771 459 aa19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 ZKSCAN1P17029 563 aaPredicted RBP19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 VCAM1P19320 739 aa19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 HOXA7P31268 230 aaPredicted RBP19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 ZYXQ15942 572 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 PPP4R3BQ5MIZ7 849 aa19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 AKNAD1Q5T1N1 836 aa19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 EMILIN3Q9NT22 766 aa19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 NYAP2Q9P242 653 aa19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 MORF4L1Q9UBU8 362 aa19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 SYNPO2Q9UMS6 1093 aa19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 ARIH1Q9Y4X5 557 aaPredicted RBP19.14■□□□□ 0.65
CACNA1A-229ENST00000636670 TSPY2A6NKD2 308 aa19.13■□□□□ 0.65
CACNA1A-229ENST00000636670 EEF2P13639 858 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-229ENST00000636670 LPAR1Q92633 364 aa19.13■□□□□ 0.65
CACNA1A-229ENST00000636670 ASCC2Q9H1I8 757 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-229ENST00000636670 TACC3Q9Y6A5 838 aa19.13■□□□□ 0.65
CACNA1A-229ENST00000636670 U3KPZ7 1027 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-229ENST00000636670 SYNGAP1Q96PV0 1343 aa19.13■□□□□ 0.65
CACNA1A-229ENST00000636670 NCOR1O75376 2440 aa19.12■□□□□ 0.65
CACNA1A-229ENST00000636670 NEDD4P46934 1319 aa19.12■□□□□ 0.65
CACNA1A-229ENST00000636670 ATN1P54259 1190 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-229ENST00000636670 IRX3P78415 501 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-229ENST00000636670 TFAP4Q01664 338 aa19.12■□□□□ 0.65
CACNA1A-229ENST00000636670 MFSD6Q6ZSS7 791 aa19.12■□□□□ 0.65
CACNA1A-229ENST00000636670 SIAH1Q8IUQ4 282 aa19.12■□□□□ 0.65
CACNA1A-229ENST00000636670 CEP95Q96GE4 821 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms