RNA–Protein interactions for RNA: ENST00000636629.1

CACNA1D-215, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2

Gene CACNA1D, Length 1,749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-215ENST00000636629 ALG1Q9BT22 464 aa16.5■□□□□ 0.23
CACNA1D-215ENST00000636629 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
CACNA1D-215ENST00000636629 MTMR6Q9Y217 621 aa16.5■□□□□ 0.23
CACNA1D-215ENST00000636629 TMX2Q9Y320 296 aa16.5■□□□□ 0.23
CACNA1D-215ENST00000636629 POLR2AP24928 1970 aaKnown RBP16.5■□□□□ 0.23
CACNA1D-215ENST00000636629 CNTNAP5Q8WYK1 1306 aa16.49■□□□□ 0.23
CACNA1D-215ENST00000636629 CYTH3O43739 400 aa16.49■□□□□ 0.23
CACNA1D-215ENST00000636629 NUCB2P80303 420 aa16.49■□□□□ 0.23
CACNA1D-215ENST00000636629 ZNF543Q08ER8 600 aa16.49■□□□□ 0.23
CACNA1D-215ENST00000636629 FOXD4L6Q3SYB3 417 aaPredicted RBP16.49■□□□□ 0.23
CACNA1D-215ENST00000636629 FOXD4L3Q6VB84 417 aaPredicted RBP16.49■□□□□ 0.23
CACNA1D-215ENST00000636629 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.49■□□□□ 0.23
CACNA1D-215ENST00000636629 TRIM22Q8IYM9 498 aa16.49■□□□□ 0.23
CACNA1D-215ENST00000636629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.49■□□□□ 0.23
CACNA1D-215ENST00000636629 PPP1R12BO60237 982 aaPredicted RBP16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 BRD1O95696 1058 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 PTPRAP18433 802 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 NF2P35240 595 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 SLC1A4P43007 532 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 MAP3K9P80192 1104 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 PKN1Q16512 942 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 FERMT3Q86UX7 667 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 FEZ1Q99689 392 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 H3BQV1 296 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 PRPF3O43395 683 aaKnown RBP16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 ZSCAN22P10073 491 aaPredicted RBP16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 PDCP20941 246 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 GNAQP50148 359 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 AKAP17AQ02040 695 aaKnown RBP16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 VGLL4Q14135 290 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 IFFO2Q5TF58 517 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 LDHDQ86WU2 507 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 GMCL1P1Q8NEA9 526 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 TNPO1Q92973 898 aaKnown RBP16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 CLMNQ96JQ2 1002 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 C8orf76Q96K31 380 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 ZHX2Q9Y6X8 837 aa16.48■□□□□ 0.23
CACNA1D-215ENST00000636629 SPP2Q13103 211 aa16.47■□□□□ 0.23
CACNA1D-215ENST00000636629 ASPRV1Q53RT3 343 aa16.47■□□□□ 0.23
CACNA1D-215ENST00000636629 DCAF4Q8WV16 495 aa16.47■□□□□ 0.23
CACNA1D-215ENST00000636629 RNF26Q9BY78 433 aaPredicted RBP16.47■□□□□ 0.23
CACNA1D-215ENST00000636629 KIF3AQ9Y496 699 aa16.47■□□□□ 0.23
CACNA1D-215ENST00000636629 SNCAIPQ9Y6H5 919 aa16.47■□□□□ 0.23
CACNA1D-215ENST00000636629 WDR33Q9C0J8 1336 aaKnown RBP16.47■□□□□ 0.23
CACNA1D-215ENST00000636629 STK36Q9NRP7 1315 aa16.47■□□□□ 0.23
CACNA1D-215ENST00000636629 TRIM75PA6NK02 468 aa16.46■□□□□ 0.23
CACNA1D-215ENST00000636629 DEXIO95424 95 aa16.46■□□□□ 0.23
CACNA1D-215ENST00000636629 SNAP25P60880 206 aa16.46■□□□□ 0.23
CACNA1D-215ENST00000636629 MTMR2Q13614 643 aa16.46■□□□□ 0.23
CACNA1D-215ENST00000636629 FAM83BQ5T0W9 1011 aa16.46■□□□□ 0.23
CACNA1D-215ENST00000636629 HOMER1Q86YM7 354 aa16.46■□□□□ 0.23
CACNA1D-215ENST00000636629 SHISA4Q96DD7 197 aa16.46■□□□□ 0.23
CACNA1D-215ENST00000636629 VCPKMTQ9H867 229 aa16.46■□□□□ 0.23
CACNA1D-215ENST00000636629 ELP3Q9H9T3 547 aa16.46■□□□□ 0.23
CACNA1D-215ENST00000636629 GOPCQ9HD26 462 aa16.46■□□□□ 0.23
CACNA1D-215ENST00000636629 TMEM232C9JQI7 657 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 BMP3P12645 472 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 NOL9Q5SY16 702 aaKnown RBP16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 ADGRF4Q8IZF3 695 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 GPKOWQ92917 476 aaPredicted RBP eCLIP16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 GMCL1Q96IK5 515 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 PIGSQ96S52 555 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 LZTS2Q9BRK4 669 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 GINM1Q9NU53 330 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 VPS54Q9P1Q0 977 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 KCNJ14Q9UNX9 436 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 USP17L10C9JJH3 530 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 IKQ13123 557 aaPredicted RBP16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 KRT40Q6A162 431 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 MCTP1Q6DN14 999 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 SH2D4AQ9H788 454 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 CSADQ9Y600 493 aa16.45■□□□□ 0.22
CACNA1D-215ENST00000636629 F13A1P00488 732 aa16.44■□□□□ 0.22
CACNA1D-215ENST00000636629 GPATCH4Q5T3I0 446 aaKnown RBP16.44■□□□□ 0.22
CACNA1D-215ENST00000636629 FAM173BQ6P4H8 233 aa16.44■□□□□ 0.22
CACNA1D-215ENST00000636629 ZNF280CQ8ND82 737 aa16.44■□□□□ 0.22
CACNA1D-215ENST00000636629 FBXO18Q8NFZ0 1043 aa16.44■□□□□ 0.22
CACNA1D-215ENST00000636629 WASF1Q92558 559 aa16.44■□□□□ 0.22
CACNA1D-215ENST00000636629 SPZ1Q9BXG8 430 aa16.44■□□□□ 0.22
CACNA1D-215ENST00000636629 KIAA1683Q9H0B3 1180 aa16.44■□□□□ 0.22
CACNA1D-215ENST00000636629 RIOX1Q9H6W3 641 aa16.44■□□□□ 0.22
CACNA1D-215ENST00000636629 JMJD4Q9H9V9 463 aa16.44■□□□□ 0.22
CACNA1D-215ENST00000636629 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
CACNA1D-215ENST00000636629 SCG2P13521 617 aa16.43■□□□□ 0.22
CACNA1D-215ENST00000636629 ARMC9Q7Z3E5 817 aa16.43■□□□□ 0.22
CACNA1D-215ENST00000636629 RRP36Q96EU6 259 aaKnown RBP16.43■□□□□ 0.22
CACNA1D-215ENST00000636629 WDR18Q9BV38 432 aa16.43■□□□□ 0.22
CACNA1D-215ENST00000636629 HMGCS2P54868 508 aa16.42■□□□□ 0.22
CACNA1D-215ENST00000636629 TRIM29Q14134 588 aa16.42■□□□□ 0.22
CACNA1D-215ENST00000636629 PFKFB3Q16875 520 aaPredicted RBP16.42■□□□□ 0.22
CACNA1D-215ENST00000636629 HEATR3Q7Z4Q2 680 aa16.42■□□□□ 0.22
CACNA1D-215ENST00000636629 ANKRD13AQ8IZ07 590 aa16.42■□□□□ 0.22
CACNA1D-215ENST00000636629 AS3MTQ9HBK9 375 aa16.42■□□□□ 0.22
CACNA1D-215ENST00000636629 FBXO28Q9NVF7 368 aa16.42■□□□□ 0.22
CACNA1D-215ENST00000636629 SYNPO2Q9UMS6 1093 aa16.42■□□□□ 0.22
CACNA1D-215ENST00000636629 AFG3L2Q9Y4W6 797 aa16.42■□□□□ 0.22
CACNA1D-215ENST00000636629 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
CACNA1D-215ENST00000636629 KIF28PB7ZC32 967 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms