RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 DIXDC1Q155Q3 683 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 INF2Q27J81 1249 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 HEATR3Q7Z4Q2 680 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 TRIML1Q8N9V2 468 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 HPS3Q969F9 1004 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 DCP1AQ9NPI6 582 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 N4BP1O75113 896 aaKnown RBP15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 STAT6P42226 847 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 TFAP4Q01664 338 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 TYW1BQ6NUM6 668 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 FCHSD1Q86WN1 690 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 MARCH10Q8NA82 808 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 CAPZA3Q96KX2 299 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 CNTNAP5Q8WYK1 1306 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 ECM29Q5VYK3 1845 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 KCNJ18B7U540 433 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 SRGAP2O75044 1071 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 ZMYND10O75800 440 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 KCNJ12Q14500 433 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 LONRF2Q1L5Z9 754 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 NUP98P52948 1817 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 TPM1P09493 284 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 PAK1Q13153 545 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 GPR161Q8N6U8 529 aaKnown RBP15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 GSDMAQ96QA5 445 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 TMEM60Q9H2L4 133 aa15.85■□□□□ 0.13
CACNA1A-228ENST00000636610 KLK7P49862 253 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 MRPS25P82663 173 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 CDKAL1Q5VV42 579 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 RGS22Q8NE09 1264 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 NSUN4Q96CB9 384 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 PCMTD1Q96MG8 357 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 PLEKHG2Q9H7P9 1386 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 H3BQF6 201 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 NKRFO15226 690 aaKnown RBP eCLIP15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 COPB1P53618 953 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 HNRNPH2P55795 449 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 RSRC2Q7L4I2 434 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 SH3RF1Q7Z6J0 888 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 FERMT2Q96AC1 680 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 PDE11AQ9HCR9 933 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 GOLGA6L9A6NEM1 432 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 ATP2C1P98194 919 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 PARP10Q53GL7 1025 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 NOA1Q8NC60 698 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 PANX2Q96RD6 677 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 SHANK3Q9BYB0 1731 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 PODXL2Q9NZ53 605 aa15.84■□□□□ 0.13
CACNA1A-228ENST00000636610 CTAGE9A4FU28 777 aa15.83■□□□□ 0.12
CACNA1A-228ENST00000636610 TUBB4AP04350 444 aa15.83■□□□□ 0.12
CACNA1A-228ENST00000636610 RPN1P04843 607 aaKnown RBP15.83■□□□□ 0.12
CACNA1A-228ENST00000636610 LMAN1P49257 510 aa15.83■□□□□ 0.12
CACNA1A-228ENST00000636610 TBC1D9BQ66K14 1250 aa15.83■□□□□ 0.12
CACNA1A-228ENST00000636610 KAT14Q9H8E8 782 aa15.83■□□□□ 0.12
CACNA1A-228ENST00000636610 ABHD10Q9NUJ1 306 aa15.83■□□□□ 0.12
CACNA1A-228ENST00000636610 TXLNAP40222 546 aa15.83■□□□□ 0.12
CACNA1A-228ENST00000636610 USP5P45974 858 aa15.83■□□□□ 0.12
CACNA1A-228ENST00000636610 DZIP1Q86YF9 867 aaKnown RBP15.83■□□□□ 0.12
CACNA1A-228ENST00000636610 TNFRSF25Q93038 417 aa15.83■□□□□ 0.12
CACNA1A-228ENST00000636610 MYH3P11055 1940 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 TTC26A0AVF1 554 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 GRIK5Q16478 980 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 TRIM47Q96LD4 638 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 FUT8Q9BYC5 575 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 ANKZF1Q9H8Y5 726 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 MKNK2Q9HBH9 465 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 ABCB6Q9NP58 842 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 CCDC194A0A1B0GVG4 234 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 E2F4Q16254 413 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 TCP11X2Q5H9J9 407 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 FKBP15Q5T1M5 1219 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 JAKMIP3Q5VZ66 844 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 SRGAP1Q7Z6B7 1085 aa15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 CRNKL1Q9BZJ0 848 aaKnown RBP15.82■□□□□ 0.12
CACNA1A-228ENST00000636610 MYO1BO43795 1136 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 HIBADHP31937 336 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 PBX1P40424 430 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 CNGA4Q8IV77 575 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 PNMA1Q8ND90 353 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 RABGGTAQ92696 567 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 DRC1Q96MC2 740 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 CTAGE1Q96RT6 745 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 RBM28Q9NW13 759 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 VPS18Q9P253 973 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 CDC23Q9UJX2 597 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 B4DLN1 442 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 UBA7P41226 1012 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 VSNL1P62760 191 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 CYP27A1Q02318 531 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 CCDC178Q5BJE1 867 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 RCSD1Q6JBY9 416 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 BLIDQ8IZY5 108 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 DUSP10Q9Y6W6 482 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 PAPPAQ13219 1627 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 LETM2Q2VYF4 491 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 MAPKAPK5Q8IW41 473 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 PSMB7Q99436 277 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 IL17RBQ9NRM6 502 aa15.81■□□□□ 0.12
CACNA1A-228ENST00000636610 ANAPC4Q9UJX5 808 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms