RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 NCOR1O75376 2440 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 ELP1O95163 1332 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 SYNGAP1Q96PV0 1343 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 LTBP2Q14767 1821 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 COBLO75128 1261 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 SURF6O75683 361 aaKnown RBP8.9□□□□□ -0.98
CIITA-214ENST00000636238 TIMP1P01033 207 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 CYP2E1P05181 493 aaPredicted RBP8.9□□□□□ -0.98
CIITA-214ENST00000636238 AKR1A1P14550 325 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 USP5P45974 858 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 AAK1Q2M2I8 961 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 PSRC1Q6PGN9 363 aaPredicted RBP8.9□□□□□ -0.98
CIITA-214ENST00000636238 SH3RF1Q7Z6J0 888 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 SLC44A5Q8NCS7 719 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 IL27Q8NEV9 243 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 TANGO6Q9C0B7 1094 aa8.9□□□□□ -0.98
CIITA-214ENST00000636238 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
CIITA-214ENST00000636238 CDH23Q9H251 3354 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 A0A1W2PQ45 241 aaPredicted RBP8.89□□□□□ -0.99
CIITA-214ENST00000636238 A0A1W2PQY0 241 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 CYP7A1P22680 504 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 CST5P28325 142 aaPredicted RBP8.89□□□□□ -0.99
CIITA-214ENST00000636238 DSG3P32926 999 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 SHMT1P34896 483 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 GABPAQ06546 454 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 MAP3K12Q12852 859 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 TNNI3KQ59H18 835 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 FAM47AQ5JRC9 791 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 MFSD5Q6N075 450 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 TMEM179Q6ZVK1 233 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 ADGRA1Q86SQ6 560 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 ACER1Q8TDN7 264 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 OTUD7AQ8TE49 926 aaPredicted RBP8.89□□□□□ -0.99
CIITA-214ENST00000636238 ADAMTS19Q8TE59 1207 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 UHRF1Q96T88 793 aaPredicted RBP8.89□□□□□ -0.99
CIITA-214ENST00000636238 TINF2Q9BSI4 451 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 CXXC1Q9P0U4 656 aaPredicted RBP8.89□□□□□ -0.99
CIITA-214ENST00000636238 SWAP70Q9UH65 585 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 SAP30BPQ9UHR5 308 aaKnown RBP8.89□□□□□ -0.99
CIITA-214ENST00000636238 TBX21Q9UL17 535 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 ADAMTS5Q9UNA0 930 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 CNPY2Q9Y2B0 182 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 NDUFB9Q9Y6M9 179 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 FPGT-TNNI3KV9GXZ4 949 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 PRUNE2Q8WUY3 3088 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 DNAH12Q6ZR08 3092 aa8.89□□□□□ -0.99
CIITA-214ENST00000636238 WDR46O15213 610 aaKnown RBP8.88□□□□□ -0.99
CIITA-214ENST00000636238 ADAMTS4O75173 837 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 ITGB8P26012 769 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 HOXD11P31277 338 aaPredicted RBP8.88□□□□□ -0.99
CIITA-214ENST00000636238 EPHB4P54760 987 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 FAAP100Q0VG06 881 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 OS9Q13438 667 aaPredicted RBP8.88□□□□□ -0.99
CIITA-214ENST00000636238 KCTD2Q14681 263 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 ZYXQ15942 572 aaKnown RBP8.88□□□□□ -0.99
CIITA-214ENST00000636238 SHROOM1Q2M3G4 852 aaPredicted RBP8.88□□□□□ -0.99
CIITA-214ENST00000636238 ZNF467Q7Z7K2 595 aaPredicted RBP8.88□□□□□ -0.99
CIITA-214ENST00000636238 NCAPG2Q86XI2 1143 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 RIOX2Q8IUF8 465 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 TMEM199Q8N511 208 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 USP38Q8NB14 1042 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 PCSK9Q8NBP7 692 aaKnown RBP8.88□□□□□ -0.99
CIITA-214ENST00000636238 FERMT2Q96AC1 680 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 CCDC17Q96LX7 622 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 LRRCC1Q9C099 1032 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 IL1RAPL2Q9NP60 686 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 STARD7Q9NQZ5 370 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 MSRAQ9UJ68 235 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 TMX2Q9Y320 296 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 EYSQ5T1H1 3165 aa8.88□□□□□ -0.99
CIITA-214ENST00000636238 PQBP1O60828 265 aaKnown RBP8.87□□□□□ -0.99
CIITA-214ENST00000636238 RAB11FIP3O75154 756 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 FLOT1O75955 427 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 ZNF865P0CJ78 1059 aaPredicted RBP8.87□□□□□ -0.99
CIITA-214ENST00000636238 GUCY1A2P33402 732 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 ACLYP53396 1101 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 NKX3-2P78367 333 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 TTF1Q15361 905 aaPredicted RBP8.87□□□□□ -0.99
CIITA-214ENST00000636238 ZNF792Q3KQV3 632 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 MAMDC4Q6UXC1 1216 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.87□□□□□ -0.99
CIITA-214ENST00000636238 PLEKHM2Q8IWE5 1019 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 KLHDC9Q8NEP7 349 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 GLT1D1Q96MS3 346 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 CRNKL1Q9BZJ0 848 aaKnown RBP8.87□□□□□ -0.99
CIITA-214ENST00000636238 VCPKMTQ9H867 229 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 SPC25Q9HBM1 224 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 ARHGEF10LQ9HCE6 1279 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 PIH1D3Q9NQM4 214 aaKnown RBP8.87□□□□□ -0.99
CIITA-214ENST00000636238 SNRKQ9NRH2 765 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 FAM184BQ9ULE4 1060 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 NOP58Q9Y2X3 529 aaKnown RBP8.87□□□□□ -0.99
CIITA-214ENST00000636238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.87□□□□□ -0.99
CIITA-214ENST00000636238 SIPA1L1O43166 1804 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 ATAD5Q96QE3 1844 aa8.87□□□□□ -0.99
CIITA-214ENST00000636238 TLR3O15455 904 aaKnown RBP8.86□□□□□ -0.99
CIITA-214ENST00000636238 DUSP11O75319 330 aaKnown RBP8.86□□□□□ -0.99
CIITA-214ENST00000636238 IDH1O75874 414 aaKnown RBP8.86□□□□□ -0.99
CIITA-214ENST00000636238 MYCNP04198 464 aaPredicted RBP8.86□□□□□ -0.99
CIITA-214ENST00000636238 POLR3DP05423 398 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms