RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 VRK3Q8IV63 474 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 TRMT44Q8IYL2 757 aaKnown RBP-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 FGFRL1Q8N441 504 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 SH2D3CQ8N5H7 860 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 IL22RA1Q8N6P7 574 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 DTX3Q8N9I9 347 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 C12orf50Q8NA57 414 aaPredicted RBP-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 SEMA6DQ8NFY4 1073 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 FNIP1Q8TF40 1166 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 UBASH3BQ8TF42 649 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 DDX12PQ92771 950 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 JARID2Q92833 1246 aaPredicted RBP-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 THOC3Q96J01 351 aaKnown RBP-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 ZFP91Q96JP5 570 aaPredicted RBP-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 LYZL4Q96KX0 146 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 SLITRK1Q96PX8 696 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 UHRF1Q96T88 793 aaPredicted RBP-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 LPIN3Q9BQK8 851 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 KRTAP2-1Q9BYU5 128 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 RBSNQ9H1K0 784 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 MEGF9Q9H1U4 602 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 TNKS2Q9H2K2 1166 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 CHRDQ9H2X0 955 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 HIPK2Q9H2X6 1198 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 C19orf44Q9H6X5 657 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 CWC22Q9HCG8 908 aaKnown RBP-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 JADE2Q9NQC1 790 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 PRDM10Q9NQV6 1147 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 ANLNQ9NQW6 1124 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 TMPRSS4Q9NRS4 437 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 DNAJB12Q9NXW2 375 aaKnown RBP-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 FRRS1LQ9P0K9 344 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 SLAMF8Q9P0V8 285 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 TNFRSF10DQ9UBN6 386 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 ATP1B4Q9UN42 357 aaPredicted RBP-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 FNDC3AQ9Y2H6 1198 aaKnown RBP-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 TBC1D30Q9Y2I9 924 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 RTCBQ9Y3I0 505 aaKnown RBP-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 GJA3Q9Y6H8 435 aa-0.49□□□□□ -2.49
CDKL5-210ENST00000636046 SETD1BQ9UPS6 1966 aaKnown RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 A0A1B0GUV1 79 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 C4orf47A7E2U8 309 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 FAM155AB1AL88 458 aaPredicted RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 EREGO14944 169 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 EPHB6O15197 1021 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 DDX3YO15523 660 aaKnown RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 EXTL3O43909 919 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 MOSPD3O75425 235 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 ITGB1P05556 798 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 NFICP08651 508 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 DUX4L4P0CJ87 422 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 ZBTB48P10074 688 aaPredicted RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 HNRNPA2B1P22626 353 aaKnown RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 GTF2E1P29083 439 aaPredicted RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 RBMXP38159 391 aaKnown RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 BCL6P41182 706 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 SARSP49591 514 aaKnown RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 NCKAP1LP55160 1127 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 DSCR10P59022 87 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 NANOS2P60321 138 aaKnown RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 YBX1P67809 324 aaKnown RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 TUBA4AP68366 448 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 NHLH1Q02575 133 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 OCA2Q04671 838 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 TLE4Q04727 773 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 DPYDQ12882 1025 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 COASYQ13057 564 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 CLN3Q13286 438 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 DSC3Q14574 896 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 KRTAP20-2Q3LI61 65 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 RGL3Q3MIN7 710 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 KRTAP19-7Q3SYF9 63 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 C4orf17Q53FE4 359 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 ARSJQ5FYB0 599 aaPredicted RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 PERM1Q5SV97 790 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 ADGRF1Q5T601 910 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 SAMD5Q5TGI4 173 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 HECTD2Q5U5R9 776 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 ICE2Q659A1 982 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 OLFML2BQ68BL8 750 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 ASPHD2Q6ICH7 369 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 ADAMTSL4Q6UY14 1074 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 TBC1D9Q6ZT07 1266 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 PLEKHH3Q7Z736 793 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 LDHDQ86WU2 507 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 NPAS4Q8IUM7 802 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 LILRA2Q8N149 483 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 RDH13Q8NBN7 331 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 ZNF384Q8TF68 577 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 NSMCE1Q8WV22 266 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 TTC9Q92623 222 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 BHMTQ93088 406 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 RPL36ALQ969Q0 106 aaKnown RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 ZNF668Q96K58 619 aaPredicted RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 KCTD15Q96SI1 283 aaPredicted RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 G6PC3Q9BUM1 346 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 FHDC1Q9C0D6 1143 aaPredicted RBP-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 GFRA4Q9GZZ7 299 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 CRISPLD2Q9H0B8 497 aa-0.5□□□□□ -2.49
CDKL5-210ENST00000636046 RNF38Q9H0F5 515 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms