RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SMC4Q9NTJ3 1288 aa22.2■■□□□ 1.14
CLN6-212ENST00000636020 MOXD2PA6NHM9 499 aa22.19■■□□□ 1.14
CLN6-212ENST00000636020 AKR1A1P14550 325 aa22.19■■□□□ 1.14
CLN6-212ENST00000636020 CDK7P50613 346 aa22.19■■□□□ 1.14
CLN6-212ENST00000636020 AAK1Q2M2I8 961 aa22.19■■□□□ 1.14
CLN6-212ENST00000636020 CCSAPQ6IQ19 270 aaPredicted RBP22.19■■□□□ 1.14
CLN6-212ENST00000636020 PSRC1Q6PGN9 363 aaPredicted RBP22.19■■□□□ 1.14
CLN6-212ENST00000636020 TTC6Q86TZ1 520 aa22.19■■□□□ 1.14
CLN6-212ENST00000636020 TMEM199Q8N511 208 aa22.19■■□□□ 1.14
CLN6-212ENST00000636020 KLHDC9Q8NEP7 349 aa22.19■■□□□ 1.14
CLN6-212ENST00000636020 SLC28A3Q9HAS3 691 aa22.19■■□□□ 1.14
CLN6-212ENST00000636020 TRANK1O15050 2925 aa22.18■■□□□ 1.14
CLN6-212ENST00000636020 MYO5AQ9Y4I1 1855 aaKnown RBP22.18■■□□□ 1.14
CLN6-212ENST00000636020 CYP7A1P22680 504 aa22.18■■□□□ 1.14
CLN6-212ENST00000636020 USP5P45974 858 aa22.18■■□□□ 1.14
CLN6-212ENST00000636020 KCNQ1P51787 676 aa22.18■■□□□ 1.14
CLN6-212ENST00000636020 ZNF792Q3KQV3 632 aa22.18■■□□□ 1.14
CLN6-212ENST00000636020 KIAA1755Q5JYT7 1200 aa22.18■■□□□ 1.14
CLN6-212ENST00000636020 HERVK_113Q902F9 699 aa22.18■■□□□ 1.14
CLN6-212ENST00000636020 ATG4CQ96DT6 458 aa22.18■■□□□ 1.14
CLN6-212ENST00000636020 PIH1D3Q9NQM4 214 aaKnown RBP22.18■■□□□ 1.14
CLN6-212ENST00000636020 DIS3Q9Y2L1 958 aaKnown RBP22.18■■□□□ 1.14
CLN6-212ENST00000636020 YBX2Q9Y2T7 364 aaKnown RBP22.18■■□□□ 1.14
CLN6-212ENST00000636020 MROH7Q68CQ1 1323 aa22.17■■□□□ 1.14
CLN6-212ENST00000636020 PGK2P07205 417 aa22.17■■□□□ 1.14
CLN6-212ENST00000636020 KCNA10Q16322 511 aa22.17■■□□□ 1.14
CLN6-212ENST00000636020 TMEM31Q5JXX7 168 aa22.17■■□□□ 1.14
CLN6-212ENST00000636020 TTC39AQ5SRH9 613 aa22.17■■□□□ 1.14
CLN6-212ENST00000636020 MUC6Q6W4X9 2439 aa22.17■■□□□ 1.14
CLN6-212ENST00000636020 ELP1O95163 1332 aa22.16■■□□□ 1.14
CLN6-212ENST00000636020 SYNRGQ9UMZ2 1314 aa22.16■■□□□ 1.14
CLN6-212ENST00000636020 SLC25A27O95847 323 aa22.16■■□□□ 1.14
CLN6-212ENST00000636020 PLCD1P51178 756 aa22.16■■□□□ 1.14
CLN6-212ENST00000636020 MIGA1Q8NAN2 632 aa22.16■■□□□ 1.14
CLN6-212ENST00000636020 CDCA7LQ96GN5 454 aa22.16■■□□□ 1.14
CLN6-212ENST00000636020 MMP19Q99542 508 aa22.16■■□□□ 1.14
CLN6-212ENST00000636020 NOB1Q9ULX3 412 aaKnown RBP22.16■■□□□ 1.14
CLN6-212ENST00000636020 ERC2O15083 957 aa22.15■■□□□ 1.14
CLN6-212ENST00000636020 FLOT1O75955 427 aa22.15■■□□□ 1.14
CLN6-212ENST00000636020 ZAP70P43403 619 aa22.15■■□□□ 1.14
CLN6-212ENST00000636020 G3BP1Q13283 466 aaKnown RBP eCLIP22.15■■□□□ 1.14
CLN6-212ENST00000636020 TMEM132BQ14DG7 1078 aa22.15■■□□□ 1.14
CLN6-212ENST00000636020 CERS3Q8IU89 383 aa22.15■■□□□ 1.14
CLN6-212ENST00000636020 MICALL1Q8N3F8 863 aa22.15■■□□□ 1.14
CLN6-212ENST00000636020 IL23AQ9NPF7 189 aa22.15■■□□□ 1.14
CLN6-212ENST00000636020 E9PSI1 815 aa22.14■■□□□ 1.13
CLN6-212ENST00000636020 GABPAQ06546 454 aa22.14■■□□□ 1.13
CLN6-212ENST00000636020 CCDC158Q5M9N0 1113 aa22.14■■□□□ 1.13
CLN6-212ENST00000636020 GLT1D1Q96MS3 346 aa22.14■■□□□ 1.13
CLN6-212ENST00000636020 DBNDD2Q9BQY9 259 aa22.14■■□□□ 1.13
CLN6-212ENST00000636020 PPP1R12CQ9BZL4 782 aa22.14■■□□□ 1.13
CLN6-212ENST00000636020 API5Q9BZZ5 524 aaKnown RBP22.14■■□□□ 1.13
CLN6-212ENST00000636020 CNPY2Q9Y2B0 182 aa22.14■■□□□ 1.13
CLN6-212ENST00000636020 MYADML2A6NDP7 307 aa22.13■■□□□ 1.13
CLN6-212ENST00000636020 GNAI3P08754 354 aa22.13■■□□□ 1.13
CLN6-212ENST00000636020 ZNF512BQ96KM6 892 aaPredicted RBP22.13■■□□□ 1.13
CLN6-212ENST00000636020 MTIF3Q9H2K0 278 aaKnown RBP22.13■■□□□ 1.13
CLN6-212ENST00000636020 GPR108Q9NPR9 543 aa22.13■■□□□ 1.13
CLN6-212ENST00000636020 FAM184BQ9ULE4 1060 aa22.13■■□□□ 1.13
CLN6-212ENST00000636020 GBF1Q92538 1859 aa22.13■■□□□ 1.13
CLN6-212ENST00000636020 ARVCFO00192 962 aa22.12■■□□□ 1.13
CLN6-212ENST00000636020 APBB1O00213 710 aa22.12■■□□□ 1.13
CLN6-212ENST00000636020 FGBP02675 491 aa22.12■■□□□ 1.13
CLN6-212ENST00000636020 CST5P28325 142 aaPredicted RBP22.12■■□□□ 1.13
CLN6-212ENST00000636020 KCTD2Q14681 263 aa22.12■■□□□ 1.13
CLN6-212ENST00000636020 RIOX2Q8IUF8 465 aa22.12■■□□□ 1.13
CLN6-212ENST00000636020 FAM126BQ8IXS8 530 aa22.12■■□□□ 1.13
CLN6-212ENST00000636020 C11orf16Q9NQ32 467 aa22.12■■□□□ 1.13
CLN6-212ENST00000636020 ADAMTS5Q9UNA0 930 aa22.12■■□□□ 1.13
CLN6-212ENST00000636020 PRRC2BQ5JSZ5 2229 aaKnown RBP22.12■■□□□ 1.13
CLN6-212ENST00000636020 MPHOSPH10O00566 681 aaKnown RBP22.11■■□□□ 1.13
CLN6-212ENST00000636020 GPR37L1O60883 481 aa22.11■■□□□ 1.13
CLN6-212ENST00000636020 DUSP11O75319 330 aaKnown RBP22.11■■□□□ 1.13
CLN6-212ENST00000636020 CYP2C18P33260 490 aa22.11■■□□□ 1.13
CLN6-212ENST00000636020 IRX5P78411 483 aaPredicted RBP22.11■■□□□ 1.13
CLN6-212ENST00000636020 SKIV2LQ15477 1246 aaKnown RBP22.11■■□□□ 1.13
CLN6-212ENST00000636020 TNNI3KQ59H18 835 aa22.11■■□□□ 1.13
CLN6-212ENST00000636020 FAM9BQ8IZU0 186 aa22.11■■□□□ 1.13
CLN6-212ENST00000636020 FPGT-TNNI3KV9GXZ4 949 aa22.11■■□□□ 1.13
CLN6-212ENST00000636020 TLL1O43897 1013 aa22.1■■□□□ 1.13
CLN6-212ENST00000636020 SNAI1O95863 264 aaPredicted RBP22.1■■□□□ 1.13
CLN6-212ENST00000636020 ASGR1P07306 291 aa22.1■■□□□ 1.13
CLN6-212ENST00000636020 SAMD1Q6SPF0 538 aaPredicted RBP22.1■■□□□ 1.13
CLN6-212ENST00000636020 ALYREFQ86V81 257 aaKnown RBP22.1■■□□□ 1.13
CLN6-212ENST00000636020 SIAH1Q8IUQ4 282 aa22.1■■□□□ 1.13
CLN6-212ENST00000636020 SPICE1Q8N0Z3 855 aa22.1■■□□□ 1.13
CLN6-212ENST00000636020 VTI1AQ96AJ9 217 aa22.1■■□□□ 1.13
CLN6-212ENST00000636020 PNMA6EA0A0J9YXQ4 647 aa22.09■■□□□ 1.13
CLN6-212ENST00000636020 A0A0U1RQG5 324 aaPredicted RBP22.09■■□□□ 1.13
CLN6-212ENST00000636020 IDH1O75874 414 aaKnown RBP22.09■■□□□ 1.13
CLN6-212ENST00000636020 POLR3DP05423 398 aaPredicted RBP22.09■■□□□ 1.13
CLN6-212ENST00000636020 POU3F3P20264 500 aaPredicted RBP22.09■■□□□ 1.13
CLN6-212ENST00000636020 RABGGTBP53611 331 aa22.09■■□□□ 1.13
CLN6-212ENST00000636020 SLFN5Q08AF3 891 aa22.09■■□□□ 1.13
CLN6-212ENST00000636020 PPP2R2DQ66LE6 453 aa22.09■■□□□ 1.13
CLN6-212ENST00000636020 MSL3Q8N5Y2 521 aaKnown RBP22.09■■□□□ 1.13
CLN6-212ENST00000636020 MAGEB6Q8N7X4 407 aa22.09■■□□□ 1.13
CLN6-212ENST00000636020 PCSK9Q8NBP7 692 aaKnown RBP22.09■■□□□ 1.13
CLN6-212ENST00000636020 TLR3O15455 904 aaKnown RBP22.08■■□□□ 1.13
CLN6-212ENST00000636020 CD4P01730 458 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms