RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 PALM3A6NDB9 673 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 SLC35F6Q8N357 371 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 TEX9Q8N6V9 391 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 CCDC87Q9NVE4 849 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 RABGAP1Q9Y3P9 1069 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 SPOPO43791 374 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 CFAP221Q4G0U5 840 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 FBXO31Q5XUX0 539 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 MAST3O60307 1309 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 TNFAIP3P21580 790 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 GGCXP38435 758 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 ME3Q16798 604 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 NBPF10Q6P3W6 841 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 LMBR1LQ6UX01 489 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 P3H4Q92791 437 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 CCNL1Q9UK58 526 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 SCRN1Q12765 414 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 CHST3Q7LGC8 479 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 HELBQ8NG08 1087 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 SLF1Q9BQI6 1058 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 KIF9Q9HAQ2 790 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 SYNRGQ9UMZ2 1314 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 PDE6BP35913 854 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 APLFQ8IW19 511 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 NIM1KQ8IY84 436 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 DENND2AQ9ULE3 1009 aa10.83□□□□□ -0.68
SPTAN1-228ENST00000635853 ACEP12821 1306 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 TLDC2A0PJX2 215 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 SLC27A2O14975 620 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 VSIG1Q86XK7 387 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 ZNF513Q8N8E2 541 aaPredicted RBP10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 NLRP1Q9C000 1473 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 ESYT2A0FGR8 921 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 CCZ1BP86790 482 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 CCZ1P86791 482 aaPredicted RBP10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 RILPL1Q5EBL4 403 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 HIBCHQ6NVY1 386 aaPredicted RBP10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 MAEAQ7L5Y9 396 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 VSTM4Q8IW00 320 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 DDX21Q9NR30 783 aaKnown RBP eCLIP10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 GGA1Q9UJY5 639 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 CFAP74Q9C0B2 1584 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 MMP14P50281 582 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 FYB2Q5VWT5 728 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 ANO1Q5XXA6 986 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 USH1CQ9Y6N9 552 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 ADGRL1O94910 1474 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 ARHGEF35A5YM69 484 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 ENO4A6NNW6 628 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 CUTAO60888 179 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 CTNNA1P35221 906 aaKnown RBP10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 KCTD16Q68DU8 428 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 ARHGAP24Q8N264 748 aa10.82□□□□□ -0.68
SPTAN1-228ENST00000635853 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.82□□□□□ -0.683e-6■■□□□ 12.8
SPTAN1-228ENST00000635853 RNF113AO15541 343 aaKnown RBP10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 DNAJC8O75937 253 aaPredicted RBP10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 LETM2Q2VYF4 491 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 NKIRAS1Q9NYS0 192 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 LCMT1Q9UIC8 334 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 NFE2L3Q9Y4A8 694 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 ABCC4O15439 1325 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 DNMT1P26358 1616 aaKnown RBP10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 HMGB1P1B2RPK0 211 aaPredicted RBP10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 TBC1D8O95759 1140 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 NR1D1P20393 614 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 STX17P56962 302 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 NCAPH2Q6IBW4 605 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 PHLDB3Q6NSJ2 640 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 DPP8Q6V1X1 898 aaPredicted RBP10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 FNBP4Q8N3X1 1017 aaPredicted RBP10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 NUP58Q9BVL2 599 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 HAUS4Q9H6D7 363 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 UTP11Q9Y3A2 253 aaKnown RBP10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 ARHGEF2Q92974 986 aaKnown RBP10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 L2HGDHQ9H9P8 463 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 KIF11P52732 1056 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 CUL3Q13618 768 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 C4orf50Q6ZRC1 276 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 ARHGAP18Q8N392 663 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 BPIFA3Q9BQP9 254 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 CD248Q9HCU0 757 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 CSADQ9Y600 493 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 EIF3HO15372 352 aaKnown RBP eCLIP10.81□□□□□ -0.685e-9■□□□□ 9.3
SPTAN1-228ENST00000635853 PFKFB2O60825 505 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 PSMD6Q15008 389 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 GNPTABQ3T906 1256 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 LONRF3Q496Y0 759 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 C8orf58Q8NAV2 365 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 CTTNBP2NLQ9P2B4 639 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 CTNND2Q9UQB3 1225 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 PPME1Q9Y570 386 aa10.81□□□□□ -0.68
SPTAN1-228ENST00000635853 ITSN2Q9NZM3 1697 aa10.8□□□□□ -0.68
SPTAN1-228ENST00000635853 STXBP3O00186 592 aa10.8□□□□□ -0.68
SPTAN1-228ENST00000635853 DIXDC1Q155Q3 683 aa10.8□□□□□ -0.68
SPTAN1-228ENST00000635853 HAUS3Q68CZ6 603 aa10.8□□□□□ -0.68
SPTAN1-228ENST00000635853 ABTB1Q969K4 478 aaPredicted RBP10.8□□□□□ -0.68
SPTAN1-228ENST00000635853 CENPKQ9BS16 269 aa10.8□□□□□ -0.68
SPTAN1-228ENST00000635853 OSBPL1AQ9BXW6 950 aa10.8□□□□□ -0.68
SPTAN1-228ENST00000635853 HYOU1Q9Y4L1 999 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms