RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 ARHGEF6Q15052 776 aa18.19■□□□□ 0.5
CLN6-211ENST00000635754 LBX2Q6XYB7 198 aa18.19■□□□□ 0.5
CLN6-211ENST00000635754 ENAHQ8N8S7 591 aaPredicted RBP18.19■□□□□ 0.5
CLN6-211ENST00000635754 MORF4L1Q9UBU8 362 aa18.19■□□□□ 0.5
CLN6-211ENST00000635754 ISY1Q9ULR0 285 aaKnown RBP18.19■□□□□ 0.5
CLN6-211ENST00000635754 ERICH2A1L162 156 aa18.18■□□□□ 0.5
CLN6-211ENST00000635754 EIF5BO60841 1220 aaKnown RBP18.18■□□□□ 0.5
CLN6-211ENST00000635754 BMP3P12645 472 aa18.18■□□□□ 0.5
CLN6-211ENST00000635754 SLC1A4P43007 532 aa18.18■□□□□ 0.5
CLN6-211ENST00000635754 KRT32Q14532 448 aa18.18■□□□□ 0.5
CLN6-211ENST00000635754 SAMD1Q6SPF0 538 aaPredicted RBP18.18■□□□□ 0.5
CLN6-211ENST00000635754 MB21D2Q8IYB1 491 aaPredicted RBP18.18■□□□□ 0.5
CLN6-211ENST00000635754 PAGR1Q9BTK6 254 aa18.18■□□□□ 0.5
CLN6-211ENST00000635754 KAT14Q9H8E8 782 aa18.18■□□□□ 0.5
CLN6-211ENST00000635754 FOXD4L1Q9NU39 408 aa18.18■□□□□ 0.5
CLN6-211ENST00000635754 MTMR7Q9Y216 660 aa18.18■□□□□ 0.5
CLN6-211ENST00000635754 RABGAP1Q9Y3P9 1069 aa18.18■□□□□ 0.5
CLN6-211ENST00000635754 MCCP23508 829 aa18.17■□□□□ 0.5
CLN6-211ENST00000635754 DSG3P32926 999 aa18.17■□□□□ 0.5
CLN6-211ENST00000635754 HSPA4P34932 840 aa18.17■□□□□ 0.5
CLN6-211ENST00000635754 IFIT1BQ5T764 474 aaKnown RBP18.17■□□□□ 0.5
CLN6-211ENST00000635754 CTU1Q7Z7A3 348 aaKnown RBP18.17■□□□□ 0.5
CLN6-211ENST00000635754 PNMA1Q8ND90 353 aa18.17■□□□□ 0.5
CLN6-211ENST00000635754 GPRC5AQ8NFJ5 357 aa18.17■□□□□ 0.5
CLN6-211ENST00000635754 DCAF4Q8WV16 495 aa18.17■□□□□ 0.5
CLN6-211ENST00000635754 ANKS1AQ92625 1134 aa18.17■□□□□ 0.5
CLN6-211ENST00000635754 SLF1Q9BQI6 1058 aa18.17■□□□□ 0.5
CLN6-211ENST00000635754 FBXO28Q9NVF7 368 aa18.17■□□□□ 0.5
CLN6-211ENST00000635754 RBPJLQ9UBG7 517 aa18.17■□□□□ 0.5
CLN6-211ENST00000635754 PPP1R9AQ9ULJ8 1098 aa18.17■□□□□ 0.5
CLN6-211ENST00000635754 COL11A1P12107 1806 aaPredicted RBP18.17■□□□□ 0.5
CLN6-211ENST00000635754 IFIT3O14879 490 aaKnown RBP18.16■□□□□ 0.5
CLN6-211ENST00000635754 MCM5P33992 734 aa18.16■□□□□ 0.5
CLN6-211ENST00000635754 CCDC96Q2M329 555 aa18.16■□□□□ 0.5
CLN6-211ENST00000635754 TSGA10IPQ3SY00 556 aa18.16■□□□□ 0.5
CLN6-211ENST00000635754 COL13A1Q5TAT6 717 aaPredicted RBP18.16■□□□□ 0.5
CLN6-211ENST00000635754 CHST3Q7LGC8 479 aa18.16■□□□□ 0.5
CLN6-211ENST00000635754 RASEFQ8IZ41 740 aa18.16■□□□□ 0.5
CLN6-211ENST00000635754 MB21D1Q8N884 522 aa18.16■□□□□ 0.5
CLN6-211ENST00000635754 CHMP4CQ96CF2 233 aa18.16■□□□□ 0.5
CLN6-211ENST00000635754 EFCC1Q9HA90 598 aa18.16■□□□□ 0.5
CLN6-211ENST00000635754 TXNRD2Q9NNW7 524 aa18.16■□□□□ 0.5
CLN6-211ENST00000635754 FEM1BQ9UK73 627 aa18.16■□□□□ 0.5
CLN6-211ENST00000635754 PSMC4P43686 418 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 STAT2P52630 851 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 FCGRTP55899 365 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 ANTXR2P58335 489 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 ERVK-9P63128 1117 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 ERVK-24P63145 666 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 IKQ13123 557 aaPredicted RBP18.15■□□□□ 0.5
CLN6-211ENST00000635754 SEC23AQ15436 765 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 PRPF38AQ8NAV1 312 aaKnown RBP18.15■□□□□ 0.5
CLN6-211ENST00000635754 ATG4CQ96DT6 458 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 NEK1Q96PY6 1258 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 MTA3Q9BTC8 594 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 USP26Q9BXU7 913 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 ARHGAP39Q9C0H5 1083 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 TRIM17Q9Y577 477 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 TMEM232C9JQI7 657 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 PRC1O43663 620 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 ECM2O94769 699 aaPredicted RBP18.15■□□□□ 0.5
CLN6-211ENST00000635754 FMNL1O95466 1100 aaPredicted RBP18.15■□□□□ 0.5
CLN6-211ENST00000635754 GNRH1P01148 92 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 PDHBP11177 359 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 CCNA1P78396 465 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 WTAPQ15007 396 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 TMEM67Q5HYA8 995 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 POTEEQ6S8J3 1075 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 KCTD1Q719H9 257 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 RASGRP2Q7LDG7 609 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 FAM160B2Q86V87 743 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 CCAR1Q8IX12 1150 aaKnown RBP18.15■□□□□ 0.5
CLN6-211ENST00000635754 CHURC1Q8WUH1 139 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 KCNB2Q92953 911 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 TRIM47Q96LD4 638 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 BTBD7Q9P203 1132 aa18.15■□□□□ 0.5
CLN6-211ENST00000635754 VWA5AO00534 786 aa18.14■□□□□ 0.49
CLN6-211ENST00000635754 PEX10O60683 326 aa18.14■□□□□ 0.49
CLN6-211ENST00000635754 CNMDO75829 334 aa18.14■□□□□ 0.49
CLN6-211ENST00000635754 OTOP1Q7RTM1 612 aa18.14■□□□□ 0.49
CLN6-211ENST00000635754 KIFC2Q96AC6 838 aa18.14■□□□□ 0.49
CLN6-211ENST00000635754 TMEM87BQ96K49 555 aa18.14■□□□□ 0.49
CLN6-211ENST00000635754 ADAMTS5Q9UNA0 930 aa18.14■□□□□ 0.49
CLN6-211ENST00000635754 SNX14Q9Y5W7 946 aa18.14■□□□□ 0.49
CLN6-211ENST00000635754 TNPO2O14787 897 aaKnown RBP18.13■□□□□ 0.49
CLN6-211ENST00000635754 PLA2G6O60733 806 aa18.13■□□□□ 0.49
CLN6-211ENST00000635754 MYCNP04198 464 aaPredicted RBP18.13■□□□□ 0.49
CLN6-211ENST00000635754 HMGB1P09429 215 aaKnown RBP18.13■□□□□ 0.49
CLN6-211ENST00000635754 SNHG28P0DPA3 235 aa18.13■□□□□ 0.49
CLN6-211ENST00000635754 CTGFP29279 349 aa18.13■□□□□ 0.49
CLN6-211ENST00000635754 CAP1Q01518 475 aa18.13■□□□□ 0.49
CLN6-211ENST00000635754 PKN2Q16513 984 aaKnown RBP18.13■□□□□ 0.49
CLN6-211ENST00000635754 Q3C1V9 767 aa18.13■□□□□ 0.49
CLN6-211ENST00000635754 ADCK5Q3MIX3 580 aa18.13■□□□□ 0.49
CLN6-211ENST00000635754 CTDP1Q9Y5B0 961 aaPredicted RBP18.13■□□□□ 0.49
CLN6-211ENST00000635754 FRMPD2Q68DX3 1309 aaPredicted RBP18.12■□□□□ 0.49
CLN6-211ENST00000635754 HOXD10P28358 340 aa18.12■□□□□ 0.49
CLN6-211ENST00000635754 MAPK4P31152 587 aa18.12■□□□□ 0.49
CLN6-211ENST00000635754 ZNF543Q08ER8 600 aa18.12■□□□□ 0.49
CLN6-211ENST00000635754 PLS1Q14651 629 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms