RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TTC30BQ8N4P2 665 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 DDX21Q9NR30 783 aaKnown RBP eCLIP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 C1orf112Q9NSG2 853 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 IFNKQ9P0W0 207 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 SCHIP1Q9P0W5 487 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 TTF2Q9UNY4 1162 aaKnown RBP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 MRPL11Q9Y3B7 192 aaKnown RBP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 SYNRGQ9UMZ2 1314 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 MBD4O95243 580 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 NPR1P16066 1061 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 MX2P20592 715 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 APOBRQ0VD83 1088 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 ASPHQ12797 758 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 PPP2R5EQ16537 467 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 SFMBT2Q5VUG0 894 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 PIK3AP1Q6ZUJ8 805 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 SLFN12Q8IYM2 578 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 NFATC2IPQ8NCF5 419 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 IQCDQ96DY2 449 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 CCDC138Q96M89 665 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 PAK1Q13153 545 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 TMX3Q96JJ7 454 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 FGD4Q96M96 766 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 SNX25Q9H3E2 840 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 NRBP2Q9NSY0 501 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 AATFQ9NY61 560 aaKnown RBP eCLIP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 DACT1Q9NYF0 836 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 ZNF212Q9UDV6 495 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 AKT3Q9Y243 479 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 HYOU1Q9Y4L1 999 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 SNAPC4Q5SXM2 1469 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 A0A1B0GVL5 298 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 RNF40O75150 1001 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 CSPG5O95196 566 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 TMEM191BP0C7N4 346 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 ATP2B4P23634 1241 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 SLC39A6Q13433 755 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 ARMC9Q7Z3E5 817 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 ARHGEF1Q92888 912 aaKnown RBP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 ANKRD36BP1Q96IX9 119 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 RABEP2Q9H5N1 569 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 TRIM45Q9H8W5 580 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 AMFRQ9UKV5 643 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 IBTKQ9P2D0 1353 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 ARHGAP6O43182 974 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 ZNF18P17022 549 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 GNL1P36915 607 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 PIK3CAP42336 1068 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 PDE6CP51160 858 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 GOLGA8FQ08AF8 430 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 GOLGA8DPQ0D2H9 430 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 NMIQ13287 307 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 TSHZ3Q63HK5 1081 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 SLC17A8Q8NDX2 589 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 JPH2Q9BR39 696 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 TRAIPQ9BWF2 469 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 TRIM31Q9BZY9 425 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 DISC1Q9NRI5 854 aa6.09□□□□□ -1.43
SCN1A-209ENST00000635750 CDV3Q9UKY7 258 aaKnown RBP6.09□□□□□ -1.43
SCN1A-209ENST00000635750 TNRQ92752 1358 aa6.09□□□□□ -1.44
SCN1A-209ENST00000635750 IL16Q14005 1332 aa6.09□□□□□ -1.44
SCN1A-209ENST00000635750 ABCD1P33897 745 aa6.09□□□□□ -1.44
SCN1A-209ENST00000635750 RAP1GDS1P52306 607 aa6.09□□□□□ -1.44
SCN1A-209ENST00000635750 ARHGDIAP52565 204 aa6.09□□□□□ -1.44
SCN1A-209ENST00000635750 SKIV2LQ15477 1246 aaKnown RBP6.09□□□□□ -1.44
SCN1A-209ENST00000635750 IGSF22Q8N9C0 903 aa6.09□□□□□ -1.44
SCN1A-209ENST00000635750 NLRP7Q8WX94 980 aa6.09□□□□□ -1.44
SCN1A-209ENST00000635750 OPTNQ96CV9 577 aa6.09□□□□□ -1.44
SCN1A-209ENST00000635750 THEGQ9P2T0 379 aa6.09□□□□□ -1.44
SCN1A-209ENST00000635750 EVI5O60447 810 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 OPHN1O60890 802 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 TRIM27P14373 513 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 STX1BP61266 288 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 PPP2R3AQ06190 1150 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 ZBTB17Q13105 803 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 PTK2BQ14289 1009 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 PPP2R5BQ15173 497 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 RPS6KA1Q15418 735 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 PHLDB3Q6NSJ2 640 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 RSBN1LQ6PCB5 846 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 POTEDQ86YR6 584 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 MYLK4Q86YV6 388 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 CCDC13Q8IYE1 715 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 DCLK2Q8N568 766 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 CACTINQ8WUQ7 758 aaKnown RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 SECISBP2LQ93073 1101 aaKnown RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 DCAF5Q96JK2 942 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 GBP5Q96PP8 586 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 VPS16Q9H269 839 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 MBIPQ9NS73 344 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 TBC1D7Q9P0N9 293 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 ABCC5O15440 1437 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 THAP12O43422 761 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 APOEP02649 317 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 KPNA2P52292 529 aaKnown RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 TYRO3Q06418 890 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 TRIM42Q8IWZ5 723 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 TEX14Q8IWB6 1497 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 SYNJ1O43426 1573 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 A0A1B0GUL7 405 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms