RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 SPATC1LQ9H0A9 340 aa18.55■□□□□ 0.56
LINC00339-209ENST00000635450 LAMA3Q16787 3333 aa18.54■□□□□ 0.56
LINC00339-209ENST00000635450 SLC15A5A6NIM6 579 aa18.54■□□□□ 0.56
LINC00339-209ENST00000635450 PRDM1O75626 825 aa18.54■□□□□ 0.56
LINC00339-209ENST00000635450 PDE4AP27815 886 aa18.54■□□□□ 0.56
LINC00339-209ENST00000635450 DSG3P32926 999 aa18.54■□□□□ 0.56
LINC00339-209ENST00000635450 CCDC129Q6ZRS4 1044 aa18.54■□□□□ 0.56
LINC00339-209ENST00000635450 IFNL3Q8IZI9 196 aa18.54■□□□□ 0.56
LINC00339-209ENST00000635450 NUP88Q99567 741 aaPredicted RBP18.54■□□□□ 0.56
LINC00339-209ENST00000635450 NAPBQ9H115 298 aa18.54■□□□□ 0.56
LINC00339-209ENST00000635450 OGDHLQ9ULD0 1010 aa18.54■□□□□ 0.56
LINC00339-209ENST00000635450 PFASO15067 1338 aa18.53■□□□□ 0.56
LINC00339-209ENST00000635450 HIP1O00291 1037 aa18.53■□□□□ 0.56
LINC00339-209ENST00000635450 WDR46O15213 610 aaKnown RBP18.53■□□□□ 0.56
LINC00339-209ENST00000635450 ERCC3P19447 782 aa18.53■□□□□ 0.56
LINC00339-209ENST00000635450 FXR1P51114 621 aaKnown RBP eCLIP18.53■□□□□ 0.56
LINC00339-209ENST00000635450 MCMDC2Q4G0Z9 681 aa18.53■□□□□ 0.56
LINC00339-209ENST00000635450 FAM83BQ5T0W9 1011 aa18.53■□□□□ 0.56
LINC00339-209ENST00000635450 LHX8Q68G74 356 aa18.53■□□□□ 0.56
LINC00339-209ENST00000635450 SH2D4AQ9H788 454 aa18.53■□□□□ 0.56
LINC00339-209ENST00000635450 DNAH12Q6ZR08 3092 aa18.53■□□□□ 0.56
LINC00339-209ENST00000635450 RAD21O60216 631 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 IGHA2P01877 340 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 SDSP20132 328 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 ADORA2AP29274 412 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 CYP2C19P33261 490 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 NMIQ13287 307 aaPredicted RBP18.52■□□□□ 0.56
LINC00339-209ENST00000635450 PLS1Q14651 629 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 TMEM132BQ14DG7 1078 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 CENPQQ7L2Z9 268 aaPredicted RBP18.52■□□□□ 0.56
LINC00339-209ENST00000635450 TRPV1Q8NER1 839 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 FAM227BQ96M60 508 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 KANSL2Q9H9L4 492 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 MKNK2Q9HBH9 465 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 ZNF287Q9HBT7 754 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 DIAPH3Q9NSV4 1193 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 RBM27Q9P2N5 1060 aaKnown RBP18.52■□□□□ 0.56
LINC00339-209ENST00000635450 IVNS1ABPQ9Y6Y0 642 aa18.52■□□□□ 0.56
LINC00339-209ENST00000635450 SMCHD1A6NHR9 2005 aa18.51■□□□□ 0.55
LINC00339-209ENST00000635450 IGKV6D-41A0A0C4DH26 115 aa18.51■□□□□ 0.55
LINC00339-209ENST00000635450 A0A0D9SFI3 127 aa18.51■□□□□ 0.55
LINC00339-209ENST00000635450 COBLO75128 1261 aa18.51■□□□□ 0.55
LINC00339-209ENST00000635450 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
LINC00339-209ENST00000635450 HOXC6P09630 235 aa18.51■□□□□ 0.55
LINC00339-209ENST00000635450 MFAP1P55081 439 aaKnown RBP18.51■□□□□ 0.55
LINC00339-209ENST00000635450 TTC22Q5TAA0 569 aa18.51■□□□□ 0.55
LINC00339-209ENST00000635450 NECAB2Q7Z6G3 386 aa18.51■□□□□ 0.55
LINC00339-209ENST00000635450 TRMT44Q8IYL2 757 aaKnown RBP18.51■□□□□ 0.55
LINC00339-209ENST00000635450 ANKLE1Q8NAG6 615 aa18.51■□□□□ 0.55
LINC00339-209ENST00000635450 PRO3102Q9H379 93 aa18.51■□□□□ 0.55
LINC00339-209ENST00000635450 HOXC10Q9NYD6 342 aa18.51■□□□□ 0.55
LINC00339-209ENST00000635450 MCM3APO60318 1980 aa18.51■□□□□ 0.55
LINC00339-209ENST00000635450 REPS2Q8NFH8 660 aa18.5■□□□□ 0.55
LINC00339-209ENST00000635450 TACC3Q9Y6A5 838 aa18.5■□□□□ 0.55
LINC00339-209ENST00000635450 EVI5O60447 810 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 NDUFB10O96000 172 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 VPS53Q5VIR6 699 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 NCAPG2Q86XI2 1143 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 C7orf61Q8IZ16 206 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 LRRC47Q8N1G4 583 aaKnown RBP18.49■□□□□ 0.55
LINC00339-209ENST00000635450 MB21D1Q8N884 522 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 SHCBP1Q8NEM2 672 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 CEP95Q96GE4 821 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 CCDC136Q96JN2 1154 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 NBPF3Q9H094 633 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 GOPCQ9HD26 462 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 PPP1R9AQ9ULJ8 1098 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 ADAMTS5Q9UNA0 930 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 CCDC171Q6TFL3 1326 aa18.49■□□□□ 0.55
LINC00339-209ENST00000635450 PLIN4Q96Q06 1357 aa18.48■□□□□ 0.55
LINC00339-209ENST00000635450 COL6A1P12109 1028 aa18.48■□□□□ 0.55
LINC00339-209ENST00000635450 CYBAP13498 195 aa18.48■□□□□ 0.55
LINC00339-209ENST00000635450 PDE4BQ07343 736 aa18.48■□□□□ 0.55
LINC00339-209ENST00000635450 MFSD14CQ5VZR4 134 aa18.48■□□□□ 0.55
LINC00339-209ENST00000635450 CWC27Q6UX04 472 aaKnown RBP18.48■□□□□ 0.55
LINC00339-209ENST00000635450 RASGRP2Q7LDG7 609 aa18.48■□□□□ 0.55
LINC00339-209ENST00000635450 ZNF444Q8N0Y2 327 aaPredicted RBP18.48■□□□□ 0.55
LINC00339-209ENST00000635450 C11orf49Q9H6J7 331 aa18.48■□□□□ 0.55
LINC00339-209ENST00000635450 INCENPQ9NQS7 918 aa18.48■□□□□ 0.55
LINC00339-209ENST00000635450 ZNF214Q9UL59 606 aaPredicted RBP18.48■□□□□ 0.55
LINC00339-209ENST00000635450 ZMYND8Q9ULU4 1186 aaPredicted RBP18.48■□□□□ 0.55
LINC00339-209ENST00000635450 VWA5AO00534 786 aa18.47■□□□□ 0.55
LINC00339-209ENST00000635450 GSPT1P15170 499 aaKnown RBP18.47■□□□□ 0.55
LINC00339-209ENST00000635450 PPARAQ07869 468 aa18.47■□□□□ 0.55
LINC00339-209ENST00000635450 FAM47AQ5JRC9 791 aa18.47■□□□□ 0.55
LINC00339-209ENST00000635450 NYAP2Q9P242 653 aa18.47■□□□□ 0.55
LINC00339-209ENST00000635450 NR2E3Q9Y5X4 410 aa18.47■□□□□ 0.55
LINC00339-209ENST00000635450 LAMA4Q16363 1823 aa18.46■□□□□ 0.55
LINC00339-209ENST00000635450 F5H6K3 240 aa18.46■□□□□ 0.55
LINC00339-209ENST00000635450 PGK2P07205 417 aa18.46■□□□□ 0.55
LINC00339-209ENST00000635450 KLRC3Q07444 240 aa18.46■□□□□ 0.55
LINC00339-209ENST00000635450 ALX1Q15699 326 aa18.46■□□□□ 0.55
LINC00339-209ENST00000635450 ANO1Q5XXA6 986 aa18.46■□□□□ 0.55
LINC00339-209ENST00000635450 DPP9Q86TI2 863 aa18.46■□□□□ 0.55
LINC00339-209ENST00000635450 ZNF589Q86UQ0 364 aaPredicted RBP18.46■□□□□ 0.55
LINC00339-209ENST00000635450 MROH8Q9H579 483 aa18.46■□□□□ 0.55
LINC00339-209ENST00000635450 CLIP2Q9UDT6 1046 aa18.46■□□□□ 0.55
LINC00339-209ENST00000635450 DDX20Q9UHI6 824 aaKnown RBP18.46■□□□□ 0.55
LINC00339-209ENST00000635450 LTBP2Q14767 1821 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 HSPD1P10809 573 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms