RNA–Protein interactions for RNA: ENST00000630981.1

SPTAN1-224, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-224ENST00000630981 MAD2L2Q9UI95 211 aa18.31■□□□□ 0.52
SPTAN1-224ENST00000630981 NID2Q14112 1375 aa18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 TESPA1A2RU30 521 aaPredicted RBP18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 GOLGA8AA7E2F4 631 aa18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 LARGE1O95461 756 aa18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 PARP1P09874 1014 aaKnown RBP18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 VCAM1P19320 739 aa18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 KIF5BP33176 963 aa18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 GNAQP50148 359 aa18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 METAP2P50579 478 aaKnown RBP eCLIP18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 MKRN3Q13064 507 aaKnown RBP18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 ASPRV1Q53RT3 343 aa18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 FAM83BQ5T0W9 1011 aa18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 GPATCH4Q5T3I0 446 aaKnown RBP18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 RASGRP2Q7LDG7 609 aa18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 CTCFLQ8NI51 663 aaPredicted RBP18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 TMX3Q96JJ7 454 aa18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 NUP88Q99567 741 aaPredicted RBP18.3■□□□□ 0.52
SPTAN1-224ENST00000630981 CCDC196A0A1B0GTZ2 297 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 PLA2G6O60733 806 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 CDC27P30260 824 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 HOXA7P31268 230 aaPredicted RBP18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 STK3Q13188 491 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 RTN1Q16799 776 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 CCDC96Q2M329 555 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 CYP4F22Q6NT55 531 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 GPAT2Q6NUI2 795 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 GADL1Q6ZQY3 521 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 KCTD1Q719H9 257 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 CCDC144CPQ8IYA2 1237 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 STAG2Q8N3U4 1231 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 BRI3BPQ8WY22 251 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 CHMP4CQ96CF2 233 aa18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 RBM28Q9NW13 759 aaKnown RBP18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 RBM19Q9Y4C8 960 aaKnown RBP18.29■□□□□ 0.52
SPTAN1-224ENST00000630981 FRMPD2Q68DX3 1309 aaPredicted RBP18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 CCL15-CCL14A0A0B4J2E2 113 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 MANSC4A6NHS7 340 aaPredicted RBP18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 USP17L15C9J2P7 530 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 USP17L13C9JLJ4 530 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 USP17L11C9JVI0 530 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 KLRF2D3W0D1 207 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 USP17L18D6R9N7 530 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 USP17L22D6RA61 530 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 USP17L17D6RBQ6 530 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 USP17L19D6RCP7 530 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 USP17L20D6RJB6 530 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 GOLGA8HP0CJ92 632 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 SMARCA1P28370 1054 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 ADD1P35611 737 aaKnown RBP18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 INHBEP58166 350 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 CCT2P78371 535 aaKnown RBP18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 USP17L24Q0WX57 530 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 SCRN1Q12765 414 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 CCL15Q16663 113 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 TTBK2Q6IQ55 1244 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 BTNL9Q6UXG8 535 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 NECAB1Q8N987 351 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 CAPNS2Q96L46 248 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 LZTS2Q9BRK4 669 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 RPAP3Q9H6T3 665 aaPredicted RBP18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 GPCPD1Q9NPB8 672 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 FEM1BQ9UK73 627 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 AGTPBP1Q9UPW5 1226 aa18.28■□□□□ 0.52
SPTAN1-224ENST00000630981 TMEM232C9JQI7 657 aa18.27■□□□□ 0.52
SPTAN1-224ENST00000630981 K7ELQ4 463 aaPredicted RBP18.27■□□□□ 0.52
SPTAN1-224ENST00000630981 HSPA6P17066 643 aa18.27■□□□□ 0.52
SPTAN1-224ENST00000630981 TREML2Q5T2D2 321 aa18.27■□□□□ 0.52
SPTAN1-224ENST00000630981 CATSPERGQ6ZRH7 1159 aa18.27■□□□□ 0.52
SPTAN1-224ENST00000630981 PAXIP1Q6ZW49 1069 aaPredicted RBP18.27■□□□□ 0.52
SPTAN1-224ENST00000630981 HSCBQ8IWL3 235 aa18.27■□□□□ 0.52
SPTAN1-224ENST00000630981 CHURC1Q8WUH1 139 aa18.27■□□□□ 0.52
SPTAN1-224ENST00000630981 GTF3C6Q969F1 213 aa18.27■□□□□ 0.52
SPTAN1-224ENST00000630981 NCOA5Q9HCD5 579 aaKnown RBP18.27■□□□□ 0.52
SPTAN1-224ENST00000630981 MYH4Q9Y623 1939 aa18.27■□□□□ 0.51
SPTAN1-224ENST00000630981 BTBD19C9JJ37 291 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 DHX16O60231 1041 aaKnown RBP18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 HTRA3P83110 453 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 FUT2Q10981 343 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 ST3GAL1Q11201 340 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 NOGQ13253 232 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 NTRK3Q16288 839 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 TMTC3Q6ZXV5 915 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 ANKRD23Q86SG2 305 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 FAM160B2Q86V87 743 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 SRBD1Q8N5C6 995 aaKnown RBP18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 PTPN18Q99952 460 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 UBA5Q9GZZ9 404 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 SLC45A1Q9Y2W3 748 aa18.26■□□□□ 0.51
SPTAN1-224ENST00000630981 PLEKHA8P1O95397 391 aa18.25■□□□□ 0.51
SPTAN1-224ENST00000630981 IFNAR1P17181 557 aa18.25■□□□□ 0.51
SPTAN1-224ENST00000630981 TM4SF4P48230 202 aa18.25■□□□□ 0.51
SPTAN1-224ENST00000630981 KIF23Q02241 960 aaPredicted RBP18.25■□□□□ 0.51
SPTAN1-224ENST00000630981 PABPC4Q13310 644 aaKnown RBP eCLIP18.25■□□□□ 0.51
SPTAN1-224ENST00000630981 CUL4AQ13619 759 aa18.25■□□□□ 0.51
SPTAN1-224ENST00000630981 COG2Q14746 738 aa18.25■□□□□ 0.51
SPTAN1-224ENST00000630981 SLC35G1Q2M3R5 365 aa18.25■□□□□ 0.51
SPTAN1-224ENST00000630981 NBPF11Q86T75 865 aa18.25■□□□□ 0.51
SPTAN1-224ENST00000630981 ZIC5Q96T25 663 aa18.25■□□□□ 0.51
SPTAN1-224ENST00000630981 TANGO6Q9C0B7 1094 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms