RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 FOXP4Q8IVH2 680 aaPredicted RBP5.12□□□□□ -1.59
CHD2-220ENST00000630813 ZNF654Q8IZM8 581 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 C17orf53Q8N3J3 647 aaPredicted RBP5.12□□□□□ -1.59
CHD2-220ENST00000630813 CRACR2BQ8N4Y2 399 aaPredicted RBP5.12□□□□□ -1.59
CHD2-220ENST00000630813 FSIP1Q8NA03 581 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 RGS22Q8NE09 1264 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 TNFRSF25Q93038 417 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 DYNLL2Q96FJ2 89 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 ZNF396Q96N95 335 aaPredicted RBP5.12□□□□□ -1.59
CHD2-220ENST00000630813 PURBQ96QR8 312 aaKnown RBP5.12□□□□□ -1.59
CHD2-220ENST00000630813 USB1Q9BQ65 265 aaKnown RBP5.12□□□□□ -1.59
CHD2-220ENST00000630813 KRT23Q9C075 422 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 ANKRD2Q9GZV1 360 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 TNMDQ9H2S6 317 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 IL17RBQ9NRM6 502 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 GNL3LQ9NVN8 582 aaKnown RBP5.12□□□□□ -1.59
CHD2-220ENST00000630813 POLR3EQ9NVU0 708 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 AATFQ9NY61 560 aaKnown RBP eCLIP5.12□□□□□ -1.59
CHD2-220ENST00000630813 POLLQ9UGP5 575 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 CFAP45Q9UL16 551 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 KCNJ14Q9UNX9 436 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 HPSEQ9Y251 543 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.12□□□□□ -1.59
CHD2-220ENST00000630813 STK36Q9NRP7 1315 aa5.12□□□□□ -1.59
CHD2-220ENST00000630813 MAST2Q6P0Q8 1798 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 hCG_1642624A0A1W2PR95 340 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 BTBD18B2RXH4 712 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 SPTLC2O15270 562 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 ORC4O43929 436 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 ZNF500O60304 480 aaPredicted RBP5.11□□□□□ -1.59
CHD2-220ENST00000630813 YEATS4O95619 227 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 CCDC192P0DO97 292 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 GTF2E1P29083 439 aaPredicted RBP5.11□□□□□ -1.59
CHD2-220ENST00000630813 MARCKSP29966 332 aaPredicted RBP5.11□□□□□ -1.59
CHD2-220ENST00000630813 FAM160A1Q05DH4 1040 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 TRDNQ13061 729 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 NR5A1Q13285 461 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 WTAPQ15007 396 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 SLC39A14Q15043 492 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 SF3A1Q15459 793 aaKnown RBP5.11□□□□□ -1.59
CHD2-220ENST00000630813 RTN1Q16799 776 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 SBK1Q52WX2 424 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 CAVIN4Q5BKX8 364 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 FAM47AQ5JRC9 791 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 MEX3CQ5U5Q3 659 aaKnown RBP5.11□□□□□ -1.59
CHD2-220ENST00000630813 SULF1Q8IWU6 871 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 DHX40Q8IX18 779 aaKnown RBP5.11□□□□□ -1.59
CHD2-220ENST00000630813 CCDC82Q8N4S0 544 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 SRBD1Q8N5C6 995 aaKnown RBP5.11□□□□□ -1.59
CHD2-220ENST00000630813 CNBD1Q8NA66 436 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 FANCBQ8NB91 859 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 SLC44A5Q8NCS7 719 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 FAM200AQ8TCP9 573 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 BICD2Q8TD16 824 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 SH3RF3Q8TEJ3 882 aaPredicted RBP5.11□□□□□ -1.59
CHD2-220ENST00000630813 BBXQ8WY36 941 aaPredicted RBP5.11□□□□□ -1.59
CHD2-220ENST00000630813 CLIC6Q96NY7 704 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 ZSCAN10Q96SZ4 725 aaPredicted RBP5.11□□□□□ -1.59
CHD2-220ENST00000630813 MTA3Q9BTC8 594 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 SLC26A6Q9BXS9 759 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 RTFDC1Q9BY42 306 aaPredicted RBP5.11□□□□□ -1.59
CHD2-220ENST00000630813 DNAJC25Q9H1X3 360 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 CNNM2Q9H8M5 875 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 ZKSCAN5Q9Y2L8 839 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 LEMD3Q9Y2U8 911 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 SLC12A7Q9Y666 1083 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 TNKSO95271 1327 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 LRRC37AA6NMS7 1700 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 LAMB1P07942 1786 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 CDK5RAP2Q96SN8 1893 aa5.11□□□□□ -1.59
CHD2-220ENST00000630813 CCDC69A6NI79 296 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 CPLX1O14810 134 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 FOXN1O15353 648 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 DHX16O60231 1041 aaKnown RBP5.1□□□□□ -1.59
CHD2-220ENST00000630813 OFD1O75665 1012 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 MMP1P03956 469 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 IL1R1P14778 569 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 PFKFB1P16118 471 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 BMP6P22004 513 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 CMA1P23946 247 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 IRS1P35568 1242 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 IARSP41252 1262 aaKnown RBP5.1□□□□□ -1.59
CHD2-220ENST00000630813 ME1P48163 572 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 PLCD1P51178 756 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 ZNF75DP51815 510 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 RHBDL3P58872 404 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 MDM2Q00987 491 aaPredicted RBP5.1□□□□□ -1.59
CHD2-220ENST00000630813 SSRP1Q08945 709 aaKnown RBP5.1□□□□□ -1.59
CHD2-220ENST00000630813 NCAPHQ15003 741 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 STK38Q15208 465 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 TXNRD1Q16881 649 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 SLC4A8Q2Y0W8 1093 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 DDX60LQ5H9U9 1706 aaKnown RBP5.1□□□□□ -1.59
CHD2-220ENST00000630813 C12orf60Q5U649 245 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 NFXL1Q6ZNB6 911 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 TMTC3Q6ZXV5 915 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 USP49Q70CQ1 688 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 RASGRP2Q7LDG7 609 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 KRT27Q7Z3Y8 459 aa5.1□□□□□ -1.59
CHD2-220ENST00000630813 BRAPQ7Z569 592 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms