RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 BBOF1Q8ND07 529 aa14.49□□□□□ -0.09
SYNGAP1-208ENST00000629380 MRRFQ96E11 262 aaKnown RBP14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 RABEP2Q9H5N1 569 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 POLR3AO14802 1390 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 F8W8V4 182 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 RNASELQ05823 741 aaKnown RBP14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 DEUP1Q05D60 604 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 CCDC13Q8IYE1 715 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 AMFRQ9UKV5 643 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 FAM98CQ17RN3 349 aaKnown RBP14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 PUM3Q15397 648 aaKnown RBP14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 TMEM87BQ96K49 555 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 MRPL46Q9H2W6 279 aaKnown RBP14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 PRPSAP1Q14558 356 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 NLRP7Q8WX94 980 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 SCYL1Q96KG9 808 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 RAB20Q9NX57 234 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 THAP12O43422 761 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 NUB1Q9Y5A7 615 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 SPECC1L-ADORA2AF8WAN1 911 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 PDE6AP16499 860 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 SKA2Q8WVK7 121 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 NPHP4O75161 1426 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 SERPINB6P35237 376 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 TNFAIP1Q13829 316 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 LETM2Q2VYF4 491 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 OTUD6AQ7L8S5 288 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 TRIM58Q8NG06 486 aa14.48□□□□□ -0.09
SYNGAP1-208ENST00000629380 PDE4DQ08499 809 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 PRPF38AQ8NAV1 312 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 ZC4H2Q9NQZ6 224 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 ANGEL1Q9UNK9 670 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 EFHD1Q9BUP0 239 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 MED4Q9NPJ6 270 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 PKD2L1Q9P0L9 805 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 POLR2BP30876 1174 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 ASPHQ12797 758 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 SCHIP1Q9P0W5 487 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 GJA3Q9Y6H8 435 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 XRCC6P12956 609 aaKnown RBP eCLIP14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 STAG1Q8WVM7 1258 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 DMP1Q13316 513 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 CCDC51Q96ER9 411 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 EFCC1Q9HA90 598 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 ZMYM4Q5VZL5 1548 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 TARBP1Q13395 1621 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 SART1O43290 800 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 TTI1O43156 1089 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 TMCO4Q5TGY1 634 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 FNBP4Q8N3X1 1017 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 MLKLQ8NB16 471 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 SH3TC1Q8TE82 1336 aa14.47□□□□□ -0.09
SYNGAP1-208ENST00000629380 GOLGA8KD6RF30 607 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 ESRRGP62508 458 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 PPME1Q9Y570 386 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.46□□□□□ -0.099e-6■■■□□ 18.7
SYNGAP1-208ENST00000629380 HOXA7P31268 230 aaPredicted RBP14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 SPOUT1Q5T280 376 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 BSPRYQ5W0U4 402 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 TRIM42Q8IWZ5 723 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 ANO1Q5XXA6 986 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 LARGE2Q8N3Y3 721 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 ANAPC5Q9UJX4 755 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 KDM6BO15054 1643 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 XRCC5P13010 732 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 LMNB2Q03252 620 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 TMTC4Q5T4D3 741 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 REXO1Q8N1G1 1221 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 CDKL2Q92772 493 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 TRIM31Q9BZY9 425 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 TRIM68Q6AZZ1 485 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 MYCT1Q8N699 235 aa14.46□□□□□ -0.09
SYNGAP1-208ENST00000629380 CEP104O60308 925 aa14.46□□□□□ -0.1
SYNGAP1-208ENST00000629380 CTNNA1P35221 906 aaKnown RBP14.46□□□□□ -0.1
SYNGAP1-208ENST00000629380 KPNA2P52292 529 aaKnown RBP14.46□□□□□ -0.1
SYNGAP1-208ENST00000629380 SLC39A6Q13433 755 aa14.46□□□□□ -0.1
SYNGAP1-208ENST00000629380 DDX41Q9UJV9 622 aaKnown RBP14.46□□□□□ -0.1
SYNGAP1-208ENST00000629380 RXRBP28702 533 aa14.46□□□□□ -0.1
SYNGAP1-208ENST00000629380 GPR162Q16538 588 aa14.46□□□□□ -0.1
SYNGAP1-208ENST00000629380 DPP8Q6V1X1 898 aaPredicted RBP14.46□□□□□ -0.1
SYNGAP1-208ENST00000629380 TEX11Q8IYF3 940 aa14.46□□□□□ -0.1
SYNGAP1-208ENST00000629380 PASKQ96RG2 1323 aa14.46□□□□□ -0.1
SYNGAP1-208ENST00000629380 ANKRD44Q8N8A2 993 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 C1orf112Q9NSG2 853 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 A0A1W2PP64 1363 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 MYH7P12883 1935 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 EXOC3O60645 756 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 C20orf194Q5TEA3 1177 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 STK38LQ9Y2H1 464 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 ERVV-2B6SEH9 535 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 UFL1O94874 794 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 TEX12Q9BXU0 123 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 PRIM1P49642 420 aaKnown RBP14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 NELFBQ8WX92 580 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 HDAC11Q96DB2 347 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 TTC25Q96NG3 672 aa14.45□□□□□ -0.1
SYNGAP1-208ENST00000629380 TTC1Q99614 292 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms