RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 SH2D4AQ9H788 454 aa13.17□□□□□ -0.3
DDX41-219ENST00000629036 GJD2Q9UKL4 321 aa13.17□□□□□ -0.3
DDX41-219ENST00000629036 LRRC37A2A6NM11 1700 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 F5H6K3 240 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 ECM2O94769 699 aaPredicted RBP13.16□□□□□ -0.3
DDX41-219ENST00000629036 TTLL1O95922 423 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
DDX41-219ENST00000629036 SLC3A2P08195 630 aaKnown RBP13.16□□□□□ -0.3
DDX41-219ENST00000629036 TSPY3P0CV98 308 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 TSPY8P0CW00 308 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 PCP11498 1178 aaKnown RBP13.16□□□□□ -0.3
DDX41-219ENST00000629036 DSG3P32926 999 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 FCGRTP55899 365 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 KLRC3Q07444 240 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
DDX41-219ENST00000629036 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 NBPF11Q86T75 865 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 GTF3C2Q8WUA4 911 aaPredicted RBP13.16□□□□□ -0.3
DDX41-219ENST00000629036 USP6NLQ92738 828 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 DPF3Q92784 378 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 ATG4CQ96DT6 458 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 ESYT1Q9BSJ8 1104 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 LSG1Q9H089 658 aaKnown RBP13.16□□□□□ -0.3
DDX41-219ENST00000629036 TCP11L1Q9NUJ3 509 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
DDX41-219ENST00000629036 NEFLP07196 543 aa13.15□□□□□ -0.3
DDX41-219ENST00000629036 CYP21A2P08686 494 aa13.15□□□□□ -0.3
DDX41-219ENST00000629036 PRMT2P55345 433 aa13.15□□□□□ -0.3
DDX41-219ENST00000629036 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
DDX41-219ENST00000629036 STOX1Q6ZVD7 989 aa13.15□□□□□ -0.3
DDX41-219ENST00000629036 MAP4K1Q92918 833 aa13.15□□□□□ -0.3
DDX41-219ENST00000629036 TANGO6Q9C0B7 1094 aa13.15□□□□□ -0.3
DDX41-219ENST00000629036 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
DDX41-219ENST00000629036 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
DDX41-219ENST00000629036 ZNF214Q9UL59 606 aaPredicted RBP13.15□□□□□ -0.3
DDX41-219ENST00000629036 ALPK3Q96L96 1907 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 TSPY2A6NKD2 308 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
DDX41-219ENST00000629036 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
DDX41-219ENST00000629036 IGHA2P01877 340 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 FLT3LGP49771 235 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 IRF5Q13568 498 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 COG2Q14746 738 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 KIF22Q14807 665 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 MORN1Q5T089 497 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 GPRC5AQ8NFJ5 357 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 SH3TC2Q8TF17 1288 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 RUFY2Q8WXA3 655 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 GMCL1Q96IK5 515 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 PAGR1Q9BTK6 254 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 PPP1R9AQ9ULJ8 1098 aa13.14□□□□□ -0.31
DDX41-219ENST00000629036 BAZ2BQ9UIF8 2168 aaKnown RBP13.14□□□□□ -0.31
DDX41-219ENST00000629036 B4E1Z4 1266 aa13.13□□□□□ -0.31
DDX41-219ENST00000629036 ZNF213O14771 459 aa13.13□□□□□ -0.31
DDX41-219ENST00000629036 TNPO2O14787 897 aaKnown RBP13.13□□□□□ -0.31
DDX41-219ENST00000629036 FLOT1O75955 427 aa13.13□□□□□ -0.31
DDX41-219ENST00000629036 TMEM132BQ14DG7 1078 aa13.13□□□□□ -0.31
DDX41-219ENST00000629036 MFSD6Q6ZSS7 791 aa13.13□□□□□ -0.31
DDX41-219ENST00000629036 MOV10L1Q9BXT6 1211 aaKnown RBP13.13□□□□□ -0.31
DDX41-219ENST00000629036 VWA5AO00534 786 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 SNHG28P0DPA3 235 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 ARHGEF6Q15052 776 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 IMMTQ16891 758 aaKnown RBP13.12□□□□□ -0.31
DDX41-219ENST00000629036 RRP12Q5JTH9 1297 aaKnown RBP13.12□□□□□ -0.31
DDX41-219ENST00000629036 CYB5R4Q7L1T6 521 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 GPR142Q7Z601 462 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 MB21D1Q8N884 522 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 ANKS1AQ92625 1134 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 TMEM47Q9BQJ4 181 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 SPATC1LQ9H0A9 340 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 RNF41Q9H4P4 317 aaPredicted RBP13.12□□□□□ -0.31
DDX41-219ENST00000629036 HOXC10Q9NYD6 342 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 CTNNA3Q9UI47 895 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 RBM8AQ9Y5S9 174 aaKnown RBP13.12□□□□□ -0.31
DDX41-219ENST00000629036 UNC80Q8N2C7 3258 aa13.12□□□□□ -0.31
DDX41-219ENST00000629036 PLA2G6O60733 806 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 KDM4AO75164 1064 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 MAPK4P31152 587 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 NT5C2P49902 561 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 GRB14Q14449 540 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 NECTIN1Q15223 517 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 SEC23AQ15436 765 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 SLFN13Q68D06 897 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 ENAHQ8N8S7 591 aaPredicted RBP13.11□□□□□ -0.31
DDX41-219ENST00000629036 SHCBP1Q8NEM2 672 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 ZSWIM5Q9P217 1185 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 STX8Q9UNK0 236 aa13.11□□□□□ -0.31
DDX41-219ENST00000629036 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
DDX41-219ENST00000629036 ATP2A1O14983 1001 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 CDC45O75419 566 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
DDX41-219ENST00000629036 ELNP15502 786 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 GRK4P32298 578 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 ANTXR2P58335 489 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX41-219ENST00000629036 MB21D2Q8IYB1 491 aaPredicted RBP13.1□□□□□ -0.31
DDX41-219ENST00000629036 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 TRIB2Q92519 343 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms