RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TMTC3Q6ZXV5 915 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 SGMS1Q86VZ5 419 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 FOXP4Q8IVH2 680 aaPredicted RBP8.5□□□□□ -1.05
PKP4-217ENST00000628904 ZFPM1Q8IX07 1006 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 DHX40Q8IX18 779 aaKnown RBP8.5□□□□□ -1.05
PKP4-217ENST00000628904 TEKT1Q969V4 418 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 PSMB7Q99436 277 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 SH2D3AQ9BRG2 576 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 SLC39A2Q9NP94 309 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 MAN1B1Q9UKM7 699 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 LEMD3Q9Y2U8 911 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 POTEMA6NI47 508 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 ATP2B4P23634 1241 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 FMR1Q06787 632 aaKnown RBP eCLIP8.5□□□□□ -1.052e-6■■■■■ 30.9
PKP4-217ENST00000628904 TCERG1LQ5VWI1 586 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 IQUBQ8NA54 791 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 TBCKQ8TEA7 893 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 CCDC47Q96A33 483 aaKnown RBP8.5□□□□□ -1.05
PKP4-217ENST00000628904 KIFC2Q96AC6 838 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 RBM28Q9NW13 759 aaKnown RBP8.5□□□□□ -1.05
PKP4-217ENST00000628904 MRC1P22897 1456 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 MEIS1O00470 390 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 PPP4R3BQ5MIZ7 849 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 SLF2Q8IX21 1173 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 FUCA2Q9BTY2 467 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 RNF26Q9BY78 433 aaPredicted RBP8.49□□□□□ -1.05
PKP4-217ENST00000628904 C6orf50Q9HD87 102 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 FZD1Q9UP38 647 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 BCS1LQ9Y276 419 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 SAMM50Q9Y512 469 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 EPS15P42566 896 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 UBXN1Q04323 297 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 PDE4DQ08499 809 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 EZH2Q15910 746 aaKnown RBP8.49□□□□□ -1.05
PKP4-217ENST00000628904 C12orf60Q5U649 245 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 WDR78Q5VTH9 848 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 WWC2Q6AWC2 1192 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 ENGASEQ8NFI3 743 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 EPC1Q9H2F5 836 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 IL17RBQ9NRM6 502 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 SERPINB13Q9UIV8 391 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 TEX33O43247 280 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 TPM2P07951 284 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 IQCB1Q15051 598 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 ARHGAP29Q52LW3 1261 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 REXO1Q8N1G1 1221 aaKnown RBP8.49□□□□□ -1.05
PKP4-217ENST00000628904 TDRD7Q8NHU6 1098 aaKnown RBP8.49□□□□□ -1.05
PKP4-217ENST00000628904 KIAA1524Q8TCG1 905 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 CCDC43Q96MW1 224 aaKnown RBP8.49□□□□□ -1.05
PKP4-217ENST00000628904 TMEM60Q9H2L4 133 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 PUF60Q9UHX1 559 aaKnown RBP8.49□□□□□ -1.05
PKP4-217ENST00000628904 DAGLAQ9Y4D2 1042 aa8.49□□□□□ -1.05
PKP4-217ENST00000628904 USP17L10C9JJH3 530 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 MATR3P43243 847 aaKnown RBP eCLIP8.48□□□□□ -1.051e-6■■■■□ 23.3
PKP4-217ENST00000628904 SEPT2Q15019 361 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 TYW1BQ6NUM6 668 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 NLGN1Q8N2Q7 840 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 PDCL2Q8N4E4 241 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 IGSF22Q8N9C0 903 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 KIF18AQ8NI77 898 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 CSRNP1Q96S65 589 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 CRACR2AQ9BSW2 395 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 BRIP1Q9BX63 1249 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 AGXT2Q9BYV1 514 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 IRX2Q9BZI1 471 aaPredicted RBP8.48□□□□□ -1.05
PKP4-217ENST00000628904 DACH1Q9UI36 760 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 CBFA2T2O43439 604 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 TRIM21P19474 475 aaKnown RBP8.48□□□□□ -1.05
PKP4-217ENST00000628904 RXRBP28702 533 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 DEF6Q9H4E7 631 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 BBOX1O75936 387 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 IPO7O95373 1038 aaKnown RBP8.48□□□□□ -1.05
PKP4-217ENST00000628904 U2AF2P26368 475 aaKnown RBP eCLIP8.48□□□□□ -1.053e-7■■■■□ 21.5
PKP4-217ENST00000628904 CALML3P27482 149 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 CERKLQ49MI3 558 aaPredicted RBP8.48□□□□□ -1.05
PKP4-217ENST00000628904 CCDC12Q8WUD4 166 aaPredicted RBP8.48□□□□□ -1.05
PKP4-217ENST00000628904 CALML4Q96GE6 196 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 SRRTQ9BXP5 876 aaKnown RBP8.48□□□□□ -1.05
PKP4-217ENST00000628904 ALDH8A1Q9H2A2 487 aaPredicted RBP8.48□□□□□ -1.05
PKP4-217ENST00000628904 FOXP1Q9H334 677 aaPredicted RBP8.48□□□□□ -1.05
PKP4-217ENST00000628904 EXOC1Q9NV70 894 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 FAM205AQ6ZU69 1335 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 PNPLA7Q6ZV29 1317 aa8.48□□□□□ -1.05
PKP4-217ENST00000628904 KCPQ6ZWJ8 1503 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 FLT1P17948 1338 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 A0A1W2PQ27 194 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 A0A1W2PQ64 194 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 A0A1W2PQD8 194 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 TDP2O95551 362 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 STIM1Q13586 685 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 MTF1Q14872 753 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 ALX1Q15699 326 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 PRR16Q569H4 304 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 SNX29Q8TEQ0 813 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 DDX4Q9NQI0 724 aaKnown RBP8.47□□□□□ -1.05
PKP4-217ENST00000628904 LRWD1Q9UFC0 647 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 SYNRGQ9UMZ2 1314 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 A0A087X0B3 334 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 NEMFO60524 1076 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 GH2P01242 217 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms