RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 LBX2Q6XYB7 198 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 NBPF11Q86T75 865 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 FAM160B2Q86V87 743 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 SKAP1Q86WV1 359 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 CLEC10AQ8IUN9 316 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 SIAH1Q8IUQ4 282 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 LRRC47Q8N1G4 583 aaKnown RBP9.17□□□□□ -0.94
NR1I3-235ENST00000628566 PRPF38AQ8NAV1 312 aaKnown RBP9.17□□□□□ -0.94
NR1I3-235ENST00000628566 CHURC1Q8WUH1 139 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 DCAF4Q8WV16 495 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 GMCL1Q96IK5 515 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 FEM1BQ9UK73 627 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 PNMA2Q9UL42 364 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 IVNS1ABPQ9Y6Y0 642 aa9.17□□□□□ -0.94
NR1I3-235ENST00000628566 GREB1LQ9C091 1923 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-235ENST00000628566 NEDD4P46934 1319 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 CASP8AP2Q9UKL3 1982 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 ZBED4O75132 1171 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 DSG3P32926 999 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 ERVK-9P63128 1117 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 ERVK-24P63145 666 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 CCDC96Q2M329 555 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 IFIT1BQ5T764 474 aaKnown RBP9.16□□□□□ -0.94
NR1I3-235ENST00000628566 OTOP1Q7RTM1 612 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 RAET1EQ8TD07 263 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 SOCS4Q8WXH5 440 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 ZSCAN10Q96SZ4 725 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-235ENST00000628566 SLF1Q9BQI6 1058 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 MTA3Q9BTC8 594 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 MCOLN1Q9GZU1 580 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 LSG1Q9H089 658 aaKnown RBP9.16□□□□□ -0.94
NR1I3-235ENST00000628566 IL25Q9H293 177 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 INCENPQ9NQS7 918 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 PPP1R9AQ9ULJ8 1098 aa9.16□□□□□ -0.94
NR1I3-235ENST00000628566 MYH4Q9Y623 1939 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 TNKSO95271 1327 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 SPDYE16A6NNV3 312 aaPredicted RBP9.15□□□□□ -0.94
NR1I3-235ENST00000628566 E7EWF7 191 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 SLC25A27O95847 323 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 HMGB1P09429 215 aaKnown RBP9.15□□□□□ -0.94
NR1I3-235ENST00000628566 MCM5P33992 734 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 NOVP48745 357 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 PLS1Q14651 629 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 GPATCH4Q5T3I0 446 aaKnown RBP9.15□□□□□ -0.94
NR1I3-235ENST00000628566 WDR78Q5VTH9 848 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 CREB3L3Q68CJ9 461 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 TMTC2Q8N394 836 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 KIFC2Q96AC6 838 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 TRIM47Q96LD4 638 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 TMEM47Q9BQJ4 181 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 NBPF3Q9H094 633 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 IL17RBQ9NRM6 502 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 SLC5A4Q9NY91 659 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 ZSWIM5Q9P217 1185 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 SRRDQ9UH36 339 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 MTMR7Q9Y216 660 aa9.15□□□□□ -0.94
NR1I3-235ENST00000628566 TMEM232C9JQI7 657 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 VWA5AO00534 786 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 IFIT3O14879 490 aaKnown RBP9.14□□□□□ -0.95
NR1I3-235ENST00000628566 SLC27A2O14975 620 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 STRNO43815 780 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 NMT2O60551 498 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 PLA2G6O60733 806 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 OAZ1P54368 228 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 WTAPQ15007 396 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 NECTIN1Q15223 517 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 SLC9C1Q4G0N8 1177 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 PLEKHH3Q7Z736 793 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 TRMT44Q8IYL2 757 aaKnown RBP9.14□□□□□ -0.95
NR1I3-235ENST00000628566 PNMA1Q8ND90 353 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 SHCBP1Q8NEM2 672 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 TMEM87BQ96K49 555 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 NUDT12Q9BQG2 462 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 ZKSCAN3Q9BRR0 538 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 TEX13BQ9BXU2 312 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 MROH8Q9H579 483 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 RBPJLQ9UBG7 517 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 PTPN22Q9Y2R2 807 aa9.14□□□□□ -0.95
NR1I3-235ENST00000628566 ECM2O94769 699 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-235ENST00000628566 PSMA5P28066 241 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 STAT3P40763 770 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 RGS2P41220 211 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 UBXN2AP68543 259 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 FGD1P98174 961 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 TRAF1Q13077 416 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 IRF5Q13568 498 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 ASPRV1Q53RT3 343 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 TMEM67Q5HYA8 995 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 SYNE3Q6ZMZ3 975 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 NFXL1Q6ZNB6 911 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 CATIPQ7Z7H3 387 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 NCAPG2Q86XI2 1143 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 ENAHQ8N8S7 591 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-235ENST00000628566 SLAIN1Q8ND83 568 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 ANKS1AQ92625 1134 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 ATG4CQ96DT6 458 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 NEK1Q96PY6 1258 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 NUP88Q99567 741 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-235ENST00000628566 SPATC1LQ9H0A9 340 aa9.13□□□□□ -0.95
NR1I3-235ENST00000628566 BIN2Q9UBW5 565 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms