RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 PKN1Q16512 942 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 FOXD4L6Q3SYB3 417 aaPredicted RBP8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 ANGEL2Q5VTE6 544 aaKnown RBP8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 DCAF15Q66K64 600 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 FOXD4L3Q6VB84 417 aaPredicted RBP8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 TNS4Q8IZW8 715 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 LRRC47Q8N1G4 583 aaKnown RBP8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 STAG2Q8N3U4 1231 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 DCAF4Q8WV16 495 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 AIFM3Q96NN9 605 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 DEFB129Q9H1M3 183 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 ARHGEF10LQ9HCE6 1279 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 BRMS1Q9HCU9 246 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 SH3GLB2Q9NR46 395 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 ADARB2Q9NS39 739 aaKnown RBP8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 LMBRD1Q9NUN5 540 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 CNPY2Q9Y2B0 182 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 PITPNM2Q9BZ72 1349 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 CEP350Q5VT06 3117 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 GOLGB1Q14789 3259 aaKnown RBP8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 USP17L5A8MUK1 530 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 DDNO94850 711 aaPredicted RBP8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 MBD3O95983 291 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 U2AF2P26368 475 aaKnown RBP eCLIP8.7□□□□□ -1.023e-21■■■■■ 32.4
PTP4A1-206ENST00000627002 GUCY1A2P33402 732 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 CAP2P40123 477 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 EPS15P42566 896 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 ZNF543Q08ER8 600 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 PFKFB3Q16875 520 aaPredicted RBP8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 OTUD7BQ6GQQ9 843 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 USP17L2Q6R6M4 530 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 USP48Q86UV5 1035 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 GMCL1P1Q8NEA9 526 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 TRPM4Q8TD43 1214 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 RRP36Q96EU6 259 aaKnown RBP8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 KIF12Q96FN5 646 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 GMCL1Q96IK5 515 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 L3MBTL3Q96JM7 780 aaPredicted RBP8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 TEPSINQ96N21 525 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 FOXP1Q9H334 677 aaPredicted RBP8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 SH2D4AQ9H788 454 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 NMRK2Q9NPI5 230 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 SEC63Q9UGP8 760 aaKnown RBP8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 ZBTB21Q9ULJ3 1066 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 MTMR7Q9Y216 660 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 ELP1O95163 1332 aa8.7□□□□□ -1.02
PTP4A1-206ENST00000627002 SIPA1L1O43166 1804 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 hCG_1984214I3L0E3 225 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 FIBPO43427 364 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 ASNSP08243 561 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 GOLGA8HP0CJ92 632 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 SLURP2P0DP57 97 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 CALML3P27482 149 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 KRT2P35908 639 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 SLC1A4P43007 532 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 UBE2HP62256 183 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 CCDC96Q2M329 555 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 KLHL40Q2TBA0 621 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 SLFN13Q68D06 897 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 MIGA2Q7L4E1 593 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 CLEC10AQ8IUN9 316 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 SIAH1Q8IUQ4 282 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 NOSTRINQ8IVI9 506 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 DIS3L2Q8IYB7 885 aaKnown RBP8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 ZNF713Q8N859 430 aaPredicted RBP8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 JMYQ8N9B5 988 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 CCDC148Q8NFR7 591 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 CCDC12Q8WUD4 166 aaPredicted RBP8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 SPATA32Q96LK8 384 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 DCBLD2Q96PD2 775 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 PHF20Q9BVI0 1012 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 ZNF341Q9BYN7 854 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 RIOX1Q9H6W3 641 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 GOPCQ9HD26 462 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 GGA3Q9NZ52 723 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 TRPC6Q9Y210 931 aa8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 DDX49Q9Y6V7 483 aaKnown RBP8.69□□□□□ -1.02
PTP4A1-206ENST00000627002 hCG_1642624A0A1W2PR95 340 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 PHF20L1A8MW92 1017 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 KIF28PB7ZC32 967 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 UBE2Q2LH0YL09 131 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 CYTH3O43739 400 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 CTNND1O60716 968 aaKnown RBP8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 HIRAP54198 1017 aaPredicted RBP8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 NLRP5P59047 1200 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 RRP1BQ14684 758 aaKnown RBP8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 SHROOM1Q2M3G4 852 aaPredicted RBP8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 SUPT20HL1Q3ZLR7 823 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 GALNT17Q6IS24 598 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 FAM173BQ6P4H8 233 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 USP50Q70EL3 339 aaPredicted RBP8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 CDAN1Q8IWY9 1227 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 LEO1Q8WVC0 666 aaPredicted RBP8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 DCPSQ96C86 337 aaKnown RBP8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 CHAMP1Q96JM3 812 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 GDPD2Q9HCC8 539 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 GPCPD1Q9NPB8 672 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 GJB4Q9NTQ9 266 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms