RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 PRAM1Q96QH2 718 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 KRTAP4-8Q9BYQ9 185 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 EXOC1Q9NV70 894 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 SPATA7Q9P0W8 599 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 STIM2Q9P246 746 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMN2-214ENST00000626847 AKAP12Q02952 1782 aa9.52□□□□□ -0.88
SMN2-214ENST00000626847 ANKRD30BQ9BXX2 1392 aa9.52□□□□□ -0.88
SMN2-214ENST00000626847 CFAP69A5D8W1 941 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 MAP4K4O95819 1239 aaPredicted RBP9.52□□□□□ -0.89
SMN2-214ENST00000626847 CORO7P57737 925 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 CENPCQ03188 943 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 FSTL1Q12841 308 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 IQCB1Q15051 598 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 E2F5Q15329 346 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 KIAA0753Q2KHM9 967 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 KLHL40Q2TBA0 621 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 KBTBD12Q3ZCT8 623 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 COX20Q5RI15 118 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 LARP1BQ659C4 914 aaKnown RBP9.52□□□□□ -0.89
SMN2-214ENST00000626847 LRRC49Q8IUZ0 686 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 RGL4Q8IZJ4 473 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 ITPKCQ96DU7 683 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 DTNBP1Q96EV8 351 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 SIN3AQ96ST3 1273 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 CLIP2Q9UDT6 1046 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 RABL2BQ9UNT1 228 aa9.52□□□□□ -0.89
SMN2-214ENST00000626847 IQSEC3Q9UPP2 1182 aaPredicted RBP9.52□□□□□ -0.89
SMN2-214ENST00000626847 SMTNL1A8MU46 457 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 U2SURPO15042 1029 aaKnown RBP9.51□□□□□ -0.89
SMN2-214ENST00000626847 RPL17P18621 184 aaKnown RBP9.51□□□□□ -0.89
SMN2-214ENST00000626847 PTGIRP43119 386 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 RRP1P56182 461 aaKnown RBP9.51□□□□□ -0.89
SMN2-214ENST00000626847 WDR4P57081 412 aaKnown RBP9.51□□□□□ -0.89
SMN2-214ENST00000626847 RELBQ01201 579 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 DDR1Q08345 913 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 CCDC70Q6NSX1 233 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 MICALCLQ6ZW33 695 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 CCDC65Q8IXS2 484 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 GPT2Q8TD30 523 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 THOC1Q96FV9 657 aaKnown RBP9.51□□□□□ -0.89
SMN2-214ENST00000626847 FAM81BQ96LP2 452 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 UIMC1Q96RL1 719 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 MPHOSPH6Q99547 160 aaKnown RBP9.51□□□□□ -0.89
SMN2-214ENST00000626847 STK31Q9BXU1 1019 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 SEZ6LQ9BYH1 1024 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 BATF3Q9NR55 127 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 MYO6Q9UM54 1294 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 TMEM98Q9Y2Y6 226 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 CD2APQ9Y5K6 639 aa9.51□□□□□ -0.89
SMN2-214ENST00000626847 PIK3C2GO75747 1445 aa9.5□□□□□ -0.89
SMN2-214ENST00000626847 OPA1O60313 960 aa9.5□□□□□ -0.89
SMN2-214ENST00000626847 U2AF1L5P0DN76 240 aaPredicted RBP9.5□□□□□ -0.89
SMN2-214ENST00000626847 EIF1AXP47813 144 aaKnown RBP9.5□□□□□ -0.89
SMN2-214ENST00000626847 U2AF1Q01081 240 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMN2-214ENST00000626847 NCBP1Q09161 790 aaKnown RBP9.5□□□□□ -0.89
SMN2-214ENST00000626847 EIF2B5Q13144 721 aaKnown RBP9.5□□□□□ -0.89
SMN2-214ENST00000626847 SLC4A8Q2Y0W8 1093 aa9.5□□□□□ -0.89
SMN2-214ENST00000626847 EAPPQ56P03 285 aaPredicted RBP9.5□□□□□ -0.89
SMN2-214ENST00000626847 SPATA21Q7Z572 469 aa9.5□□□□□ -0.89
SMN2-214ENST00000626847 ABTB2Q8N961 1025 aa9.5□□□□□ -0.89
SMN2-214ENST00000626847 EXOC4Q96A65 974 aa9.5□□□□□ -0.89
SMN2-214ENST00000626847 HOXC10Q9NYD6 342 aa9.5□□□□□ -0.89
SMN2-214ENST00000626847 WDR37Q9Y2I8 494 aa9.5□□□□□ -0.89
SMN2-214ENST00000626847 LRRFIP2Q9Y608 721 aaKnown RBP9.5□□□□□ -0.89
SMN2-214ENST00000626847 USP3Q9Y6I4 520 aa9.5□□□□□ -0.89
SMN2-214ENST00000626847 IKBKGQ9Y6K9 419 aa9.5□□□□□ -0.89
SMN2-214ENST00000626847 NHSQ6T4R5 1651 aa9.5□□□□□ -0.89
SMN2-214ENST00000626847 RAB11FIP3O75154 756 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 NOS2P35228 1153 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 G3BP1Q13283 466 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMN2-214ENST00000626847 PARP10Q53GL7 1025 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 TMEM214Q6NUQ4 689 aaKnown RBP9.49□□□□□ -0.89
SMN2-214ENST00000626847 TOM1L2Q6ZVM7 507 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 Q6ZVU0 165 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 LMNTD2Q8IXW0 634 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 CYP4X1Q8N118 509 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 ANKRD24Q8TF21 1146 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 ACSBG1Q96GR2 724 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 ZSCAN10Q96SZ4 725 aaPredicted RBP9.49□□□□□ -0.89
SMN2-214ENST00000626847 SPOCK3Q9BQ16 436 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 IFT122Q9HBG6 1241 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 TFCP2L1Q9NZI6 479 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 HCN4Q9Y3Q4 1203 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 ATP6V0A2Q9Y487 856 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 BRD4O60885 1362 aaPredicted RBP9.49□□□□□ -0.89
SMN2-214ENST00000626847 VIRMAQ69YN4 1812 aaKnown RBP9.49□□□□□ -0.89
SMN2-214ENST00000626847 TUBGCP6Q96RT7 1819 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 WNK3Q9BYP7 1800 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 USP19O94966 1318 aa9.49□□□□□ -0.89
SMN2-214ENST00000626847 RTN3O95197 1032 aaPredicted RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 PSMD7P51665 324 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 TEAD4Q15561 434 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 PKN1Q16512 942 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 C4orf46Q504U0 113 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 CCDC92Q53HC0 331 aaPredicted RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 KCNV1Q6PIU1 500 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 SPATS2Q86XZ4 545 aaKnown RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 WDR63Q8IWG1 891 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 ERMNQ8TAM6 284 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms