RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 THAP3Q8WTV1 239 aaPredicted RBP4.11□□□□□ -1.75
SCARNA4-202ENST00000625402 BRF1Q92994 677 aa4.11□□□□□ -1.75
SCARNA4-202ENST00000625402 EXOC2Q96KP1 924 aa4.11□□□□□ -1.75
SCARNA4-202ENST00000625402 SPATA9Q9BWV2 254 aa4.11□□□□□ -1.75
SCARNA4-202ENST00000625402 GFOD1Q9NXC2 390 aa4.11□□□□□ -1.75
SCARNA4-202ENST00000625402 CGGBP1Q9UFW8 167 aaPredicted RBP4.11□□□□□ -1.75
SCARNA4-202ENST00000625402 CDC45O75419 566 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 PRAMEF1O95521 474 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 CBX7O95931 251 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 CTSKP43235 329 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 ZNF143P52747 638 aaPredicted RBP4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 PPP2R2AP63151 447 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 TNK2Q07912 1038 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 CYP4F3Q08477 520 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 ANKRD39Q53RE8 183 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 PLEKHG4Q58EX7 1191 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 SFRP5Q5T4F7 317 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 RNF43Q68DV7 783 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 OGFOD3Q6PK18 319 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 EPN3Q9H201 632 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 WHRNQ9P202 907 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 STOML1Q9UBI4 398 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 PCDHB12Q9Y5F1 795 aa4.1□□□□□ -1.75
SCARNA4-202ENST00000625402 WASH4PA8MWX3 477 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 H0Y8X5 98 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 IGF2BP3O00425 579 aaKnown RBP eCLIP4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 ITGA4P13612 1032 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 ITIH2P19823 946 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 HSD3B2P26439 372 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 OXCT1P55809 520 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 NFIAQ12857 509 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 DOC2BQ14184 412 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 SF1Q15637 639 aaKnown RBP4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 NKPD1Q17RQ9 610 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 TMEM67Q5HYA8 995 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 NKAPLQ5M9Q1 402 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 KIAA0907Q7Z7F0 614 aaPredicted RBP4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 SPACA3Q8IXA5 215 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 MFSD4AQ8N468 514 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 FIBCD1Q8N539 461 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 ZBTB38Q8NAP3 1195 aaPredicted RBP4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 LRRN4CLQ8ND94 238 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 SHKBP1Q8TBC3 707 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 BTN2A2Q8WVV5 523 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 KISS1RQ969F8 398 aaPredicted RBP4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 PPP1R14AQ96A00 147 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 SGSM3Q96HU1 749 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 MRGPRX3Q96LB0 322 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 DBNDD2Q9BQY9 259 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 MCMBPQ9BTE3 642 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 HDAC8Q9BY41 377 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 GBP3Q9H0R5 595 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 NOL6Q9H6R4 1146 aaKnown RBP4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 EMC9Q9Y3B6 208 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 FHOD1Q9Y613 1164 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 SBNO2Q9Y2G9 1366 aa4.09□□□□□ -1.75
SCARNA4-202ENST00000625402 MEIS1O00470 390 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 PPP1R12AO14974 1030 aaPredicted RBP4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 SIGLEC6O43699 453 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 NAT2P11245 290 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 FSTP19883 344 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 L1CAMP32004 1257 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 CHMP4BP1P59074 171 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 NMIQ13287 307 aaPredicted RBP4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 PPP2R5DQ14738 602 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 RSPO4Q2I0M5 234 aaPredicted RBP4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 FAM209AQ5JX71 171 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 CRTC3Q6UUV7 619 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 ADAT2Q7Z6V5 191 aaKnown RBP4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 ZDHHC13Q8IUH4 622 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 TRIM59Q8IWR1 403 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 LRRC47Q8N1G4 583 aaKnown RBP4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 ARHGEF39Q8N4T4 335 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 BVESQ8NE79 360 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 SYTL5Q8TDW5 730 aaPredicted RBP4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 APPBP2Q92624 585 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 OSBP2Q969R2 916 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 ZDHHC15Q96MV8 337 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 APBA2Q99767 749 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 SPOCK3Q9BQ16 436 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 AARSD1Q9BTE6 412 aaKnown RBP4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 FBXL21Q9UKT6 434 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 PLAGL2Q9UPG8 496 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 SUGT1Q9Y2Z0 365 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 CD2APQ9Y5K6 639 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 ST14Q9Y5Y6 855 aa4.08□□□□□ -1.76
SCARNA4-202ENST00000625402 WDR64B1ANS9 1081 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 DYRK3O43781 588 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 PPM1BO75688 479 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 KCNH1O95259 989 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 ASMTLO95671 621 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 IGLV1-40P01703 118 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 CEACAM5P06731 702 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 SRFP11831 508 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 CYP7A1P22680 504 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 KIR3DL1P43629 444 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 CBX2Q14781 532 aaPredicted RBP4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 GTF2IRD2BQ6EKJ0 949 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 C16orf86Q6ZW13 317 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms