RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 EEF2P13639 858 aaKnown RBP13.35□□□□□ -0.27
DDX41-218ENST00000625286 HSP90AB4PQ58FF6 505 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 ABRAQ8N0Z2 381 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 MB21D1Q8N884 522 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 ARRDC4Q8NCT1 418 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 REPS2Q8NFH8 660 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 BADQ92934 168 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 KIF1BPQ96EK5 621 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 LBHD1Q9BQE6 289 aaPredicted RBP13.35□□□□□ -0.27
DDX41-218ENST00000625286 COL25A1Q9BXS0 654 aaPredicted RBP13.35□□□□□ -0.27
DDX41-218ENST00000625286 MROH8Q9H579 483 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 PDLIM7Q9NR12 457 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 PAG1Q9NWQ8 432 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 SWAP70Q9UH65 585 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
DDX41-218ENST00000625286 IFIT2P09913 472 aaKnown RBP13.34□□□□□ -0.27
DDX41-218ENST00000625286 ATP5JP18859 108 aa13.34□□□□□ -0.27
DDX41-218ENST00000625286 EPHB4P54760 987 aa13.34□□□□□ -0.27
DDX41-218ENST00000625286 ICA1Q05084 483 aa13.34□□□□□ -0.27
DDX41-218ENST00000625286 CTR9Q6PD62 1173 aa13.34□□□□□ -0.27
DDX41-218ENST00000625286 SAMD1Q6SPF0 538 aaPredicted RBP13.34□□□□□ -0.27
DDX41-218ENST00000625286 C16orf86Q6ZW13 317 aa13.34□□□□□ -0.27
DDX41-218ENST00000625286 RPAP2Q8IXW5 612 aaPredicted RBP13.34□□□□□ -0.27
DDX41-218ENST00000625286 LENG1Q96BZ8 264 aaPredicted RBP13.34□□□□□ -0.27
DDX41-218ENST00000625286 HAUS7Q99871 368 aa13.34□□□□□ -0.27
DDX41-218ENST00000625286 PUS7LQ9H0K6 701 aaKnown RBP13.34□□□□□ -0.27
DDX41-218ENST00000625286 ATP8A2Q9NTI2 1148 aa13.34□□□□□ -0.27
DDX41-218ENST00000625286 COG6Q9Y2V7 657 aa13.34□□□□□ -0.27
DDX41-218ENST00000625286 ZBED9Q6R2W3 1325 aa13.34□□□□□ -0.27
DDX41-218ENST00000625286 PLXNA1Q9UIW2 1896 aa13.33□□□□□ -0.27
DDX41-218ENST00000625286 VWA5AO00534 786 aa13.33□□□□□ -0.28
DDX41-218ENST00000625286 FCER1AP12319 257 aa13.33□□□□□ -0.28
DDX41-218ENST00000625286 ZNF792Q3KQV3 632 aa13.33□□□□□ -0.28
DDX41-218ENST00000625286 C1orf53Q5VUE5 145 aa13.33□□□□□ -0.28
DDX41-218ENST00000625286 TTYH1Q9H313 450 aaPredicted RBP13.33□□□□□ -0.28
DDX41-218ENST00000625286 SEMA6BQ9H3T3 888 aa13.33□□□□□ -0.28
DDX41-218ENST00000625286 ARHGEF10LQ9HCE6 1279 aa13.33□□□□□ -0.28
DDX41-218ENST00000625286 ZNF214Q9UL59 606 aaPredicted RBP13.33□□□□□ -0.28
DDX41-218ENST00000625286 KBTBD13C9JR72 458 aa13.32□□□□□ -0.28
DDX41-218ENST00000625286 WDR46O15213 610 aaKnown RBP13.32□□□□□ -0.28
DDX41-218ENST00000625286 PGK1P00558 417 aa13.32□□□□□ -0.28
DDX41-218ENST00000625286 ZNF865P0CJ78 1059 aaPredicted RBP13.32□□□□□ -0.28
DDX41-218ENST00000625286 TLE2Q04725 743 aa13.32□□□□□ -0.28
DDX41-218ENST00000625286 RIOX2Q8IUF8 465 aa13.32□□□□□ -0.28
DDX41-218ENST00000625286 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
DDX41-218ENST00000625286 NUP88Q99567 741 aaPredicted RBP13.32□□□□□ -0.28
DDX41-218ENST00000625286 CDX2Q99626 313 aaPredicted RBP13.32□□□□□ -0.28
DDX41-218ENST00000625286 PRDM5Q9NQX1 630 aaPredicted RBP13.32□□□□□ -0.28
DDX41-218ENST00000625286 PHF24Q9UPV7 400 aa13.32□□□□□ -0.28
DDX41-218ENST00000625286 MYH7P12883 1935 aa13.32□□□□□ -0.28
DDX41-218ENST00000625286 GREB1LQ9C091 1923 aaPredicted RBP13.32□□□□□ -0.28
DDX41-218ENST00000625286 SMARCA5O60264 1052 aaPredicted RBP13.31□□□□□ -0.28
DDX41-218ENST00000625286 RAB11FIP3O75154 756 aa13.31□□□□□ -0.28
DDX41-218ENST00000625286 STAT3P40763 770 aa13.31□□□□□ -0.28
DDX41-218ENST00000625286 IRX5P78411 483 aaPredicted RBP13.31□□□□□ -0.28
DDX41-218ENST00000625286 UBE3CQ15386 1083 aa13.31□□□□□ -0.28
DDX41-218ENST00000625286 FAM83BQ5T0W9 1011 aa13.31□□□□□ -0.28
DDX41-218ENST00000625286 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
DDX41-218ENST00000625286 MMP19Q99542 508 aa13.31□□□□□ -0.28
DDX41-218ENST00000625286 TINF2Q9BSI4 451 aa13.31□□□□□ -0.28
DDX41-218ENST00000625286 KANSL2Q9H9L4 492 aa13.31□□□□□ -0.28
DDX41-218ENST00000625286 PRKAG2Q9UGJ0 569 aa13.31□□□□□ -0.28
DDX41-218ENST00000625286 PPP1R9AQ9ULJ8 1098 aa13.31□□□□□ -0.28
DDX41-218ENST00000625286 RIPK3Q9Y572 518 aa13.31□□□□□ -0.28
DDX41-218ENST00000625286 SLC4A4Q9Y6R1 1079 aa13.31□□□□□ -0.28
DDX41-218ENST00000625286 SLC25A27O95847 323 aa13.3□□□□□ -0.28
DDX41-218ENST00000625286 SNAI1O95863 264 aaPredicted RBP13.3□□□□□ -0.28
DDX41-218ENST00000625286 C20orf194Q5TEA3 1177 aa13.3□□□□□ -0.28
DDX41-218ENST00000625286 STRBPQ96SI9 672 aaKnown RBP13.3□□□□□ -0.28
DDX41-218ENST00000625286 XPNPEP3Q9NQH7 507 aa13.3□□□□□ -0.28
DDX41-218ENST00000625286 SLC5A4Q9NY91 659 aa13.3□□□□□ -0.28
DDX41-218ENST00000625286 TTC28Q96AY4 2481 aa13.3□□□□□ -0.28
DDX41-218ENST00000625286 MUC3AQ02505 3323 aa13.29□□□□□ -0.28
DDX41-218ENST00000625286 A0A1W2PQ45 241 aaPredicted RBP13.29□□□□□ -0.28
DDX41-218ENST00000625286 A0A1W2PQY0 241 aa13.29□□□□□ -0.28
DDX41-218ENST00000625286 GSG1L2A8MUP6 293 aa13.29□□□□□ -0.28
DDX41-218ENST00000625286 ADCY6O43306 1168 aa13.29□□□□□ -0.28
DDX41-218ENST00000625286 ADAMTS4O75173 837 aa13.29□□□□□ -0.28
DDX41-218ENST00000625286 RASA1P20936 1047 aa13.29□□□□□ -0.28
DDX41-218ENST00000625286 ZNF697Q5TEC3 545 aa13.29□□□□□ -0.28
DDX41-218ENST00000625286 CCSAPQ6IQ19 270 aaPredicted RBP13.29□□□□□ -0.28
DDX41-218ENST00000625286 STK11IPQ8N1F8 1099 aa13.29□□□□□ -0.28
DDX41-218ENST00000625286 SH2D4AQ9H788 454 aa13.29□□□□□ -0.28
DDX41-218ENST00000625286 DDX19BQ9UMR2 479 aa13.29□□□□□ -0.28
DDX41-218ENST00000625286 DIS3Q9Y2L1 958 aaKnown RBP13.29□□□□□ -0.28
DDX41-218ENST00000625286 MCM3APO60318 1980 aa13.29□□□□□ -0.28
DDX41-218ENST00000625286 CHD9Q3L8U1 2897 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 DNAJC25-GNG10A0A024R161 153 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 MYADML2A6NDP7 307 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 HMMRO75330 724 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 RARBP10826 455 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 FAAP100Q0VG06 881 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 KCTD2Q14681 263 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 MYLIPQ8WY64 445 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 OSBP2Q969R2 916 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 FGD4Q96M96 766 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 NRBP1Q9UHY1 535 aa13.28□□□□□ -0.28
DDX41-218ENST00000625286 IGKV6D-41A0A0C4DH26 115 aa13.27□□□□□ -0.29
DDX41-218ENST00000625286 F5H6K3 240 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms