RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 COLQQ9Y215 455 aaPredicted RBP23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 IVNS1ABPQ9Y6Y0 642 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 ROBO3Q96MS0 1386 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 SLC15A5A6NIM6 579 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 PTPREP23469 700 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 MFAP1P55081 439 aaKnown RBP23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 SBK1Q52WX2 424 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 GIMAP6Q6P9H5 292 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 DIS3LQ8TF46 1054 aaKnown RBP23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 PAWRQ96IZ0 340 aaKnown RBP23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 NR2E3Q9Y5X4 410 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 GSG1L2A8MUP6 293 aa23.67■■□□□ 1.38
R3HCC1-210ENST00000625275 CACNB2Q08289 660 aaPredicted RBP23.67■■□□□ 1.38
R3HCC1-210ENST00000625275 NECAB2Q7Z6G3 386 aa23.67■■□□□ 1.38
R3HCC1-210ENST00000625275 SPICE1Q8N0Z3 855 aa23.67■■□□□ 1.38
R3HCC1-210ENST00000625275 WDR46O15213 610 aaKnown RBP23.66■■□□□ 1.38
R3HCC1-210ENST00000625275 GRB14Q14449 540 aa23.66■■□□□ 1.38
R3HCC1-210ENST00000625275 MB21D1Q8N884 522 aa23.66■■□□□ 1.38
R3HCC1-210ENST00000625275 KANSL2Q9H9L4 492 aa23.66■■□□□ 1.38
R3HCC1-210ENST00000625275 FLOT1O75955 427 aa23.65■■□□□ 1.38
R3HCC1-210ENST00000625275 HSPD1P10809 573 aaKnown RBP23.65■■□□□ 1.38
R3HCC1-210ENST00000625275 EEF2P13639 858 aaKnown RBP23.65■■□□□ 1.38
R3HCC1-210ENST00000625275 MOV10L1Q9BXT6 1211 aaKnown RBP23.65■■□□□ 1.38
R3HCC1-210ENST00000625275 EPB41L4AQ9HCS5 686 aaPredicted RBP23.65■■□□□ 1.38
R3HCC1-210ENST00000625275 OGDHLQ9ULD0 1010 aa23.65■■□□□ 1.38
R3HCC1-210ENST00000625275 PATL2C9JE40 543 aaKnown RBP23.64■■□□□ 1.38
R3HCC1-210ENST00000625275 APPP05067 770 aa23.64■■□□□ 1.38
R3HCC1-210ENST00000625275 DSG3P32926 999 aa23.64■■□□□ 1.38
R3HCC1-210ENST00000625275 ATP2B2Q01814 1243 aa23.64■■□□□ 1.38
R3HCC1-210ENST00000625275 C8orf34Q49A92 452 aa23.64■■□□□ 1.38
R3HCC1-210ENST00000625275 SPATC1LQ9H0A9 340 aa23.64■■□□□ 1.38
R3HCC1-210ENST00000625275 EVI5O60447 810 aa23.63■■□□□ 1.37
R3HCC1-210ENST00000625275 HOXC6P09630 235 aa23.63■■□□□ 1.37
R3HCC1-210ENST00000625275 CCND3P30281 292 aaPredicted RBP23.63■■□□□ 1.37
R3HCC1-210ENST00000625275 CHRDL2Q6WN34 429 aa23.63■■□□□ 1.37
R3HCC1-210ENST00000625275 SHCBP1Q8NEM2 672 aa23.63■■□□□ 1.37
R3HCC1-210ENST00000625275 ATG4CQ96DT6 458 aa23.63■■□□□ 1.37
R3HCC1-210ENST00000625275 MINDY4BA8MYZ0 360 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 RASA1P20936 1047 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 MNX1P50219 401 aaPredicted RBP23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 MFSD14CQ5VZR4 134 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 IFNL3Q8IZI9 196 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 NBPF3Q9H094 633 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 GOPCQ9HD26 462 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 FLRT1Q9NZU1 646 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 LAMA4Q16363 1823 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 TDO2P48775 406 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 PTH1RQ03431 593 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 DSCC1Q9BVC3 393 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 NACAP1Q9BZK3 213 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 MKNK2Q9HBH9 465 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 SMCHD1A6NHR9 2005 aa23.62■■□□□ 1.37
R3HCC1-210ENST00000625275 STRNO43815 780 aa23.61■■□□□ 1.37
R3HCC1-210ENST00000625275 ERCC3P19447 782 aa23.61■■□□□ 1.37
R3HCC1-210ENST00000625275 FXR1P51114 621 aaKnown RBP eCLIP23.61■■□□□ 1.37
R3HCC1-210ENST00000625275 PLS1Q14651 629 aa23.61■■□□□ 1.37
R3HCC1-210ENST00000625275 STK11IPQ8N1F8 1099 aa23.61■■□□□ 1.37
R3HCC1-210ENST00000625275 NPLOC4Q8TAT6 608 aa23.61■■□□□ 1.37
R3HCC1-210ENST00000625275 LSG1Q9H089 658 aaKnown RBP23.61■■□□□ 1.37
R3HCC1-210ENST00000625275 ANO2Q9NQ90 1003 aa23.61■■□□□ 1.37
R3HCC1-210ENST00000625275 ADORA2AP29274 412 aa23.6■■□□□ 1.37
R3HCC1-210ENST00000625275 SAMD1Q6SPF0 538 aaPredicted RBP23.6■■□□□ 1.37
R3HCC1-210ENST00000625275 KIAA1211Q6ZU35 1233 aa23.6■■□□□ 1.37
R3HCC1-210ENST00000625275 NAPBQ9H115 298 aa23.6■■□□□ 1.37
R3HCC1-210ENST00000625275 C11orf49Q9H6J7 331 aa23.6■■□□□ 1.37
R3HCC1-210ENST00000625275 FGAP02671 866 aa23.59■■□□□ 1.37
R3HCC1-210ENST00000625275 ALX1Q15699 326 aa23.59■■□□□ 1.37
R3HCC1-210ENST00000625275 LHX8Q68G74 356 aa23.59■■□□□ 1.37
R3HCC1-210ENST00000625275 MROH8Q9H579 483 aa23.59■■□□□ 1.37
R3HCC1-210ENST00000625275 ZMYM6O95789 1325 aa23.59■■□□□ 1.37
R3HCC1-210ENST00000625275 RAD21O60216 631 aa23.58■■□□□ 1.37
R3HCC1-210ENST00000625275 DPP9Q86TI2 863 aa23.58■■□□□ 1.37
R3HCC1-210ENST00000625275 ZNF287Q9HBT7 754 aa23.58■■□□□ 1.37
R3HCC1-210ENST00000625275 FBXO28Q9NVF7 368 aa23.58■■□□□ 1.37
R3HCC1-210ENST00000625275 PCDH10Q9P2E7 1040 aa23.58■■□□□ 1.37
R3HCC1-210ENST00000625275 RANBP2P49792 3224 aaKnown RBP23.58■■□□□ 1.37
R3HCC1-210ENST00000625275 REC8O95072 547 aa23.57■■□□□ 1.36
R3HCC1-210ENST00000625275 FAM83BQ5T0W9 1011 aa23.57■■□□□ 1.36
R3HCC1-210ENST00000625275 NCAPG2Q86XI2 1143 aa23.57■■□□□ 1.36
R3HCC1-210ENST00000625275 MAP4K1Q92918 833 aa23.57■■□□□ 1.36
R3HCC1-210ENST00000625275 NYAP2Q9P242 653 aa23.57■■□□□ 1.36
R3HCC1-210ENST00000625275 RBM27Q9P2N5 1060 aaKnown RBP23.57■■□□□ 1.36
R3HCC1-210ENST00000625275 ADAMTS5Q9UNA0 930 aa23.57■■□□□ 1.36
R3HCC1-210ENST00000625275 MCM3APO60318 1980 aa23.57■■□□□ 1.36
R3HCC1-210ENST00000625275 IGHA2P01877 340 aa23.56■■□□□ 1.36
R3HCC1-210ENST00000625275 CYP2C19P33261 490 aa23.56■■□□□ 1.36
R3HCC1-210ENST00000625275 TMEM132BQ14DG7 1078 aa23.56■■□□□ 1.36
R3HCC1-210ENST00000625275 OLFML2BQ68BL8 750 aa23.56■■□□□ 1.36
R3HCC1-210ENST00000625275 ABRAQ8N0Z2 381 aa23.56■■□□□ 1.36
R3HCC1-210ENST00000625275 PRO3102Q9H379 93 aa23.56■■□□□ 1.36
R3HCC1-210ENST00000625275 PPP1R9AQ9ULJ8 1098 aa23.56■■□□□ 1.36
R3HCC1-210ENST00000625275 PFASO15067 1338 aa23.56■■□□□ 1.36
R3HCC1-210ENST00000625275 C7orf61Q8IZ16 206 aa23.56■■□□□ 1.36
R3HCC1-210ENST00000625275 PLIN4Q96Q06 1357 aa23.55■■□□□ 1.36
R3HCC1-210ENST00000625275 IGKV6D-41A0A0C4DH26 115 aa23.55■■□□□ 1.36
R3HCC1-210ENST00000625275 MSCO60682 206 aa23.55■■□□□ 1.36
R3HCC1-210ENST00000625275 PRDM1O75626 825 aa23.55■■□□□ 1.36
R3HCC1-210ENST00000625275 SEC24BO95487 1268 aa23.55■■□□□ 1.36
R3HCC1-210ENST00000625275 SLC25A27O95847 323 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms