RNA–Protein interactions for RNA: ENST00000625033.1

PCDHB2-205, Transcript of protocadherin beta 2, humanhuman

TSL 4 BASIC

Gene PCDHB2, Length 519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-205ENST00000625033 UBXN2AP68543 259 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 TFAP4Q01664 338 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 PDE4BQ07343 736 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 GRB14Q14449 540 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 TMEM132BQ14DG7 1078 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 CCL14Q16627 93 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 UBE2Q1Q7Z7E8 422 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 ZNF444Q8N0Y2 327 aaPredicted RBP13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 LRRC47Q8N1G4 583 aaKnown RBP13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 NUDT12Q9BQG2 462 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 SPATC1LQ9H0A9 340 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 RNF208Q9H0X6 261 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 GOPCQ9HD26 462 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 IL17RBQ9NRM6 502 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 CLIP2Q9UDT6 1046 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 PDE4DIPQ5VU43 2346 aa13.19□□□□□ -0.3
PCDHB2-205ENST00000625033 F5H6K3 240 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 IGHA2P01877 340 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 GJB1P08034 283 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 TSPY3P0CV98 308 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 TSPY8P0CW00 308 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 XRCC5P13010 732 aaKnown RBP13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 PTPREP23469 700 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 NOVP48745 357 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 KLRC3Q07444 240 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 MAP3K21Q5TCX8 1036 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 RASGRP2Q7LDG7 609 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 TBC1D10CQ8IV04 446 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 APBA2Q99767 749 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 HOXC10Q9NYD6 342 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 BIN2Q9UBW5 565 aaPredicted RBP13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 PPP1R9AQ9ULJ8 1098 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 SYNPO2Q9UMS6 1093 aa13.18□□□□□ -0.3
PCDHB2-205ENST00000625033 MYH6P13533 1939 aa13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 ORC4O43929 436 aa13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 TTLL1O95922 423 aa13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 SLC3A2P08195 630 aaKnown RBP13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 ERCC3P19447 782 aa13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 HAND2P61296 217 aa13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 CCNA1P78396 465 aa13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 MAP2K5Q13163 448 aa13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 MB21D1Q8N884 522 aa13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 GMCL1P1Q8NEA9 526 aa13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 NPLOC4Q8TAT6 608 aa13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 U2AF1L4Q8WU68 220 aaKnown RBP13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 ZNF214Q9UL59 606 aaPredicted RBP13.17□□□□□ -0.3
PCDHB2-205ENST00000625033 NEDD4P46934 1319 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 DNAH12Q6ZR08 3092 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 SLC15A5A6NIM6 579 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 VWA5AO00534 786 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 RAD21O60216 631 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 SGPL1O95470 568 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 RGS2P41220 211 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 WDR78Q5VTH9 848 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 SHCBP1Q8NEM2 672 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 CRISPLD2Q9H0B8 497 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 DIAPH3Q9NSV4 1193 aa13.16□□□□□ -0.3
PCDHB2-205ENST00000625033 HOXC6P09630 235 aa13.15□□□□□ -0.3
PCDHB2-205ENST00000625033 PRKAR2AP13861 404 aaKnown RBP13.15□□□□□ -0.3
PCDHB2-205ENST00000625033 ZKSCAN1P17029 563 aaPredicted RBP13.15□□□□□ -0.3
PCDHB2-205ENST00000625033 CACNB2Q08289 660 aaPredicted RBP13.15□□□□□ -0.3
PCDHB2-205ENST00000625033 SKAP1Q86WV1 359 aa13.15□□□□□ -0.3
PCDHB2-205ENST00000625033 TRMT44Q8IYL2 757 aaKnown RBP13.15□□□□□ -0.3
PCDHB2-205ENST00000625033 STAG1Q8WVM7 1258 aa13.15□□□□□ -0.3
PCDHB2-205ENST00000625033 DEFB118Q96PH6 123 aa13.15□□□□□ -0.3
PCDHB2-205ENST00000625033 SLF1Q9BQI6 1058 aa13.15□□□□□ -0.3
PCDHB2-205ENST00000625033 RPTORQ8N122 1335 aa13.14□□□□□ -0.31
PCDHB2-205ENST00000625033 HIP1O00291 1037 aa13.14□□□□□ -0.31
PCDHB2-205ENST00000625033 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
PCDHB2-205ENST00000625033 COBLO75128 1261 aa13.14□□□□□ -0.31
PCDHB2-205ENST00000625033 ADORA2AP29274 412 aa13.14□□□□□ -0.31
PCDHB2-205ENST00000625033 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
PCDHB2-205ENST00000625033 PLS1Q14651 629 aa13.14□□□□□ -0.31
PCDHB2-205ENST00000625033 SLFN13Q68D06 897 aa13.14□□□□□ -0.31
PCDHB2-205ENST00000625033 RIOX2Q8IUF8 465 aa13.14□□□□□ -0.31
PCDHB2-205ENST00000625033 CCAR1Q8IX12 1150 aaKnown RBP13.14□□□□□ -0.31
PCDHB2-205ENST00000625033 DSCC1Q9BVC3 393 aa13.14□□□□□ -0.31
PCDHB2-205ENST00000625033 CCND3P30281 292 aaPredicted RBP13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 MFAP1P55081 439 aaKnown RBP13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 RRP12Q5JTH9 1297 aaKnown RBP13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 AKNAD1Q5T1N1 836 aa13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 RCSD1Q6JBY9 416 aa13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 NCAPG2Q86XI2 1143 aa13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 CHMP4CQ96CF2 233 aa13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 GMCL1Q96IK5 515 aa13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 MROH8Q9H579 483 aa13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 CWC22Q9HCG8 908 aaKnown RBP13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 HMX1Q9NP08 348 aaPredicted RBP13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 STX8Q9UNK0 236 aa13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 RIPK3Q9Y572 518 aa13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 RAD50Q92878 1312 aa13.13□□□□□ -0.31
PCDHB2-205ENST00000625033 BMP3P12645 472 aa13.12□□□□□ -0.31
PCDHB2-205ENST00000625033 CHMLP26374 656 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms