RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 IFNKQ9P0W0 207 aa20.12■□□□□ 0.81
PCF11-207ENST00000624931 A0A1B0GVL5 298 aa20.11■□□□□ 0.81
PCF11-207ENST00000624931 CLRN2A0PK11 232 aa20.11■□□□□ 0.81
PCF11-207ENST00000624931 YBX3P16989 372 aaKnown RBP eCLIP20.11■□□□□ 0.81
PCF11-207ENST00000624931 WTAPQ15007 396 aa20.11■□□□□ 0.81
PCF11-207ENST00000624931 SEC23AQ15436 765 aa20.11■□□□□ 0.81
PCF11-207ENST00000624931 ANO1Q5XXA6 986 aa20.11■□□□□ 0.81
PCF11-207ENST00000624931 APOA5Q6Q788 366 aa20.11■□□□□ 0.81
PCF11-207ENST00000624931 TMC6Q7Z403 805 aa20.11■□□□□ 0.81
PCF11-207ENST00000624931 MICU3Q86XE3 530 aa20.11■□□□□ 0.81
PCF11-207ENST00000624931 ELOA2Q8IYF1 753 aaPredicted RBP20.11■□□□□ 0.81
PCF11-207ENST00000624931 ARGLU1Q9NWB6 273 aaPredicted RBP20.11■□□□□ 0.81
PCF11-207ENST00000624931 ORC3Q9UBD5 711 aaPredicted RBP20.11■□□□□ 0.81
PCF11-207ENST00000624931 SPDYE2BA6NHP3 402 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 PPP6R2O75170 966 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 SPDYE6P0CI01 402 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 PCP11498 1178 aaKnown RBP20.1■□□□□ 0.81
PCF11-207ENST00000624931 H2AFXP16104 143 aaPredicted RBP20.1■□□□□ 0.81
PCF11-207ENST00000624931 CDK8P49336 464 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 NAA30Q147X3 362 aaPredicted RBP20.1■□□□□ 0.81
PCF11-207ENST00000624931 C16orf86Q6ZW13 317 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 ENAHQ8N8S7 591 aaPredicted RBP20.1■□□□□ 0.81
PCF11-207ENST00000624931 AGBL3Q8NEM8 1001 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 ZSCAN10Q96SZ4 725 aaPredicted RBP20.1■□□□□ 0.81
PCF11-207ENST00000624931 GJA3Q9Y6H8 435 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 CPLX1O14810 134 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 ATP8B1O43520 1251 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 CDKL5O76039 1030 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 RASA1P20936 1047 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 FOSBP53539 338 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 GUCY1B3Q02153 619 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 ELF2Q15723 593 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 DPCR1Q3MIW9 517 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 FBXO38Q6PIJ6 1188 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 SGMS1Q86VZ5 419 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 MKNK2Q9HBH9 465 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 TUBE1Q9UJT0 475 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 HDAC9Q9UKV0 1011 aa20.1■□□□□ 0.81
PCF11-207ENST00000624931 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.1■□□□□ 0.814e-11■■□□□ 11.5
PCF11-207ENST00000624931 FAM237AA0A1B0GTK4 181 aa20.09■□□□□ 0.81
PCF11-207ENST00000624931 TSPY2A6NKD2 308 aa20.09■□□□□ 0.81
PCF11-207ENST00000624931 FZD9O00144 591 aa20.09■□□□□ 0.81
PCF11-207ENST00000624931 ETF1P62495 437 aaKnown RBP20.09■□□□□ 0.81
PCF11-207ENST00000624931 TFAP4Q01664 338 aa20.09■□□□□ 0.81
PCF11-207ENST00000624931 SART3Q15020 963 aaKnown RBP20.09■□□□□ 0.81
PCF11-207ENST00000624931 SLC39A14Q15043 492 aa20.09■□□□□ 0.81
PCF11-207ENST00000624931 DLGAP5Q15398 846 aa20.09■□□□□ 0.81
PCF11-207ENST00000624931 ARMCX5Q6P1M9 558 aa20.09■□□□□ 0.81
PCF11-207ENST00000624931 SH3BP5LQ7L8J4 393 aa20.09■□□□□ 0.81
PCF11-207ENST00000624931 IDI2Q9BXS1 227 aa20.09■□□□□ 0.81
PCF11-207ENST00000624931 CLIC4Q9Y696 253 aa20.09■□□□□ 0.81
PCF11-207ENST00000624931 SBF1O95248 1867 aa20.08■□□□□ 0.81
PCF11-207ENST00000624931 ERICH2A1L162 156 aa20.08■□□□□ 0.81
PCF11-207ENST00000624931 GOLGA6L9A6NEM1 432 aa20.08■□□□□ 0.81
PCF11-207ENST00000624931 DDTLA6NHG4 134 aaPredicted RBP20.08■□□□□ 0.81
PCF11-207ENST00000624931 LIFRP42702 1097 aa20.08■□□□□ 0.81
PCF11-207ENST00000624931 GMPSP49915 693 aaPredicted RBP20.08■□□□□ 0.81
PCF11-207ENST00000624931 FANCCQ00597 558 aa20.08■□□□□ 0.81
PCF11-207ENST00000624931 NCAPHQ15003 741 aa20.08■□□□□ 0.81
PCF11-207ENST00000624931 TNIP1Q15025 636 aa20.08■□□□□ 0.81
PCF11-207ENST00000624931 CPLX2Q6PUV4 134 aaKnown RBP20.08■□□□□ 0.81
PCF11-207ENST00000624931 OGFOD1Q8N543 542 aa20.08■□□□□ 0.81
PCF11-207ENST00000624931 DICER1Q9UPY3 1922 aaKnown RBP20.08■□□□□ 0.8
PCF11-207ENST00000624931 FAM196BA6NMK8 535 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 GOLGA8AA7E2F4 631 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 ZSCAN12O43309 604 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 EGFRP00533 1210 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 CDC27P30260 824 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 METAP2P50579 478 aaKnown RBP eCLIP20.07■□□□□ 0.86e-7■□□□□ 11
PCF11-207ENST00000624931 EIF6P56537 245 aaKnown RBP20.07■□□□□ 0.8
PCF11-207ENST00000624931 ZNF70Q9UC06 446 aaPredicted RBP20.07■□□□□ 0.8
PCF11-207ENST00000624931 MYH8P13535 1937 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 TCP10L2B9ZVM9 353 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 ZBTB43O43298 467 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 KIF23Q02241 960 aaPredicted RBP20.07■□□□□ 0.8
PCF11-207ENST00000624931 GABPAQ06546 454 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 AXDND1Q5T1B0 1012 aaPredicted RBP20.07■□□□□ 0.8
PCF11-207ENST00000624931 IQCA1Q86XH1 822 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 IL17RBQ9NRM6 502 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 SLC12A7Q9Y666 1083 aa20.07■□□□□ 0.8
PCF11-207ENST00000624931 PFKFB1P16118 471 aa20.06■□□□□ 0.8
PCF11-207ENST00000624931 MYL5Q02045 173 aa20.06■□□□□ 0.8
PCF11-207ENST00000624931 SYT10Q6XYQ8 523 aa20.06■□□□□ 0.8
PCF11-207ENST00000624931 ZNF654Q8IZM8 581 aa20.06■□□□□ 0.8
PCF11-207ENST00000624931 HOOK1Q9UJC3 728 aaKnown RBP20.06■□□□□ 0.8
PCF11-207ENST00000624931 SOCS7O14512 581 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 TSPY3P0CV98 308 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 TSPY8P0CW00 308 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 LMNB1P20700 586 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 SYKP43405 635 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 NBPF9Q3BBW0 867 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 IFIT1BQ5T764 474 aaKnown RBP20.05■□□□□ 0.8
PCF11-207ENST00000624931 RBM26Q5T8P6 1007 aaKnown RBP20.05■□□□□ 0.8
PCF11-207ENST00000624931 RCSD1Q6JBY9 416 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 HOMER1Q86YM7 354 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 ZSCAN29Q8IWY8 852 aaPredicted RBP20.05■□□□□ 0.8
PCF11-207ENST00000624931 ZNF444Q8N0Y2 327 aaPredicted RBP20.05■□□□□ 0.8
PCF11-207ENST00000624931 ZBED3Q96IU2 234 aaPredicted RBP20.05■□□□□ 0.8
PCF11-207ENST00000624931 MTA3Q9BTC8 594 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 TMX1Q9H3N1 280 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms