RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 CEP104O60308 925 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 PTGDRQ13258 359 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 KRT71Q3SY84 523 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 ZNF658Q5TYW1 1059 aaPredicted RBP13.12□□□□□ -0.31
ATRX-214ENST00000624166 SFMBT2Q5VUG0 894 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 SPATA5Q8NB90 893 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 AIFM3Q96NN9 605 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 VEZTQ9HBM0 779 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 PLCB1Q9NQ66 1216 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 FAM207AQ9NSI2 230 aaPredicted RBP13.12□□□□□ -0.31
ATRX-214ENST00000624166 ZMYND10O75800 440 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 CTNNA1P35221 906 aaKnown RBP13.12□□□□□ -0.31
ATRX-214ENST00000624166 SNCBQ16143 134 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 ASIC2Q16515 512 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 PLEKHA4Q9H4M7 779 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 ABCA9Q8IUA7 1624 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 TRIM66O15016 1216 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 IGKV5-2P06315 115 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 GUCY2FP51841 1108 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 RNASE9P60153 205 aaKnown RBP13.12□□□□□ -0.31
ATRX-214ENST00000624166 KRT31Q15323 416 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 TUBGCP2Q9BSJ2 902 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 TRIM7Q9C029 511 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 ABHD10Q9NUJ1 306 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 STK36Q9NRP7 1315 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 SHPRHQ149N8 1683 aa13.12□□□□□ -0.31
ATRX-214ENST00000624166 TBCAO75347 108 aaKnown RBP13.11□□□□□ -0.31
ATRX-214ENST00000624166 ATP5DP30049 168 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 USP14P54578 494 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 ZBED6P86452 979 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 SLC20A2Q08357 652 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 LETM2Q2VYF4 491 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 SHC4Q6S5L8 630 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 ARMC9Q7Z3E5 817 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 CCDC65Q8IXS2 484 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 RRP36Q96EU6 259 aaKnown RBP13.11□□□□□ -0.31
ATRX-214ENST00000624166 MAGEF1Q9HAY2 307 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 SAMM50Q9Y512 469 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 A1BGP04217 495 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 ATP11AP98196 1134 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 STOX1Q6ZVD7 989 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 CABP7Q86V35 215 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 PNMA8AQ86V59 439 aaPredicted RBP13.11□□□□□ -0.31
ATRX-214ENST00000624166 REXO1L1PQ8IX06 675 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 PAGE5Q96GU1 130 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 ACTR5Q9H9F9 607 aaPredicted RBP13.11□□□□□ -0.31
ATRX-214ENST00000624166 BAIAP2L1Q9UHR4 511 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 INO80Q9ULG1 1556 aaPredicted RBP13.11□□□□□ -0.31
ATRX-214ENST00000624166 USP31Q70CQ4 1352 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 PDE8AO60658 829 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 MYL1P05976 194 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 VSNL1P62760 191 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 KLHL30Q0D2K2 578 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 CLUL1Q15846 466 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 CCDC6Q16204 474 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 SMYD4Q8IYR2 804 aaPredicted RBP13.11□□□□□ -0.31
ATRX-214ENST00000624166 CTNNBL1Q8WYA6 563 aaPredicted RBP13.11□□□□□ -0.31
ATRX-214ENST00000624166 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
ATRX-214ENST00000624166 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
ATRX-214ENST00000624166 GJB4Q9NTQ9 266 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 NCAPD2Q15021 1401 aa13.11□□□□□ -0.31
ATRX-214ENST00000624166 TARSL2A2RTX5 802 aaKnown RBP13.1□□□□□ -0.31
ATRX-214ENST00000624166 PPARAQ07869 468 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 SETDB1Q15047 1291 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 SLF2Q8IX21 1173 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 SYCE1Q8N0S2 351 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 COG1Q8WTW3 980 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 FUT8Q9BYC5 575 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 TMEM51Q9NW97 253 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 MROH5Q6ZUA9 1318 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 PCDH11XQ9BZA7 1347 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 PCDH11YQ9BZA8 1340 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 NEXMIFQ5QGS0 1516 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 A0A1W2PRG0 241 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 ANKRD62A6NC57 917 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 PHKG2P15735 406 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 GSTO1P78417 241 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 KCTD16Q68DU8 428 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 MB21D2Q8IYB1 491 aaPredicted RBP13.1□□□□□ -0.31
ATRX-214ENST00000624166 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 ADD2P35612 726 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 GUCY2DQ02846 1103 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 IFT88Q13099 833 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 CALCOCO2Q13137 446 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 PPP2R5EQ16537 467 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 MTUS1Q9ULD2 1270 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 PCDHB6Q9Y5E3 794 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 TNKSO95271 1327 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 SMIM23A6NLE4 172 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 ANKRD65E5RJM6 399 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 NNTQ13423 1086 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 TCP11X2Q5H9J9 407 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 EPHA10Q5JZY3 1008 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 TAOK1Q7L7X3 1001 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 CMTR1Q8N1G2 835 aaKnown RBP13.1□□□□□ -0.31
ATRX-214ENST00000624166 TC2NQ8N9U0 490 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 FBF1Q8TES7 1133 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms