RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 PYGBP11216 843 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 IL15P40933 162 aaPredicted RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 PAPOLAP51003 745 aaKnown RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 NDUFA8P51970 172 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 ANTXR2P58335 489 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 XRCC4Q13426 336 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 KARSQ15046 597 aaKnown RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 CCDC181Q5TID7 509 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 ARHGAP22Q7Z5H3 698 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 FAM81AQ8TBF8 368 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 ZNF526Q8TF50 670 aaPredicted RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 NUP133Q8WUM0 1156 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 MRPS27Q92552 414 aaKnown RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 CCDC97Q96F63 343 aaPredicted RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 ZNF396Q96N95 335 aaPredicted RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 EPN3Q9H201 632 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 DENND2AQ9ULE3 1009 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 C15orf41Q9Y2V0 281 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 PCDHGC5Q9Y5F6 944 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 MROH7-TTC4A0A0A0MT08 1334 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 PAPPAQ13219 1627 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 C4AP0C0L4 1744 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 C4BP0C0L5 1744 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 A0A1W2PQ27 194 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 A0A1W2PQ64 194 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 A0A1W2PQD8 194 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 LUC7L3O95232 432 aaKnown RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 SERPINC1P01008 464 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 E2F5Q15329 346 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 CFAP100Q494V2 611 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 RNF187Q5TA31 235 aaPredicted RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 MTHFD1LQ6UB35 978 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 C6orf89Q6UWU4 347 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 CCDC121Q6ZUS5 278 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 MB21D2Q8IYB1 491 aaPredicted RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 MIPOL1Q8TD10 442 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 ZNF473Q8WTR7 871 aaKnown RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 PIK3R5Q8WYR1 880 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 ZNF274Q96GC6 653 aaPredicted RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 CCDC85AQ96PX6 553 aaPredicted RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 EHD4Q9H223 541 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 MRPL44Q9H9J2 332 aaKnown RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 RTEL1Q9NZ71 1219 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 SPDYE3A6NKU9 549 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 GOLGA8BA8MQT2 603 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 PPP1R12BO60237 982 aaPredicted RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 BUB1BO60566 1050 aaPredicted RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 DNAJC8O75937 253 aaPredicted RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 POLR3DP05423 398 aaPredicted RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 MYL5Q02045 173 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 FKBP4Q02790 459 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 SFSWAPQ12872 951 aaKnown RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 THEMIS2Q5TEJ8 643 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 TC2NQ8N9U0 490 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 LINC00301Q8NCQ3 95 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 RIN2Q8WYP3 895 aaPredicted RBP8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 TSPAN18Q96SJ8 248 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 SELENOOQ9BVL4 669 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 GOPCQ9HD26 462 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 RIC1Q4ADV7 1423 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 STRCP1A6NGW2 1772 aa8.38□□□□□ -1.07
TRIM49B-202ENST00000622138 KLF18A0A0U1RQI7 1052 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 PRC1O43663 620 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 RPSAP08865 295 aaKnown RBP8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 LMOD1P29536 600 aaPredicted RBP8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 SF3A1Q15459 793 aaKnown RBP8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 ZRSR2Q15696 482 aaKnown RBP8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 EMC10Q5UCC4 262 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 ECM29Q5VYK3 1845 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 TNS3Q68CZ2 1445 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 KDM7AQ6ZMT4 941 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 CADPS2Q86UW7 1296 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 KIRREL3Q8IZU9 778 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 NOA1Q8NC60 698 aaKnown RBP8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 ATL2Q8NHH9 583 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 NSMCE1Q8WV22 266 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 AIFM3Q96NN9 605 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 PUS7LQ9H0K6 701 aaKnown RBP8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 HSD3B7Q9H2F3 369 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 C19orf44Q9H6X5 657 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 TTF2Q9UNY4 1162 aaKnown RBP8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 GOLGA6L10A6NI86 522 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 ABLIM1O14639 778 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 CIAO1O76071 339 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 ATP6V1G2O95670 118 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 ZAP70P43403 619 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 MKRN4PQ13434 485 aaPredicted RBP8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 RIPK1Q13546 671 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 BLMHQ13867 455 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 WASHC4Q2M389 1173 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 CCDC57Q2TAC2 916 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 LACTB2Q53H82 288 aaPredicted RBP8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 GALNT15Q8N3T1 639 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 CUL5Q93034 780 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 ANKRD27Q96NW4 1050 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 PANX2Q96RD6 677 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 TSC22D3Q99576 134 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 EPAS1Q99814 870 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 SDF4Q9BRK5 362 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 TSGA10Q9BZW7 698 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms