RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 PKP1Q13835 747 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 WDR70Q9NW82 654 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 ADAM21Q9UKJ8 722 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 CAPN11Q9UMQ6 739 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 SLC27A2O14975 620 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 SUPT3HO75486 399 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 PPP1R2P41236 205 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 DYMQ7RTS9 669 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 PARP9Q8IXQ6 854 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 RNF34Q969K3 372 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 CHAMP1Q96JM3 812 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
CLTC-215ENST00000621829 DDX28Q9NUL7 540 aaKnown RBP12.72□□□□□ -0.37
CLTC-215ENST00000621829 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 DAAM1Q9Y4D1 1078 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 SNX14Q9Y5W7 946 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 EPHB4P54760 987 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 TYW1Q9NV66 732 aaKnown RBP12.72□□□□□ -0.37
CLTC-215ENST00000621829 KRT75O95678 551 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 PHLPP2Q6ZVD8 1323 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 RASSF10A6NK89 507 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 OCA2Q04671 838 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 KAZNQ674X7 775 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 KIAA1468Q9P260 1216 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 CEP85Q6P2H3 762 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 RINLQ6ZS11 566 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 MAEAQ7L5Y9 396 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 CCDC51Q96ER9 411 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 RIC8AQ9NPQ8 531 aa12.72□□□□□ -0.37
CLTC-215ENST00000621829 CALR3Q96L12 384 aaKnown RBP12.71□□□□□ -0.37
CLTC-215ENST00000621829 ATF2P15336 505 aa12.71□□□□□ -0.37
CLTC-215ENST00000621829 KCNA4P22459 653 aa12.71□□□□□ -0.37
CLTC-215ENST00000621829 ATP8B2P98198 1209 aa12.71□□□□□ -0.37
CLTC-215ENST00000621829 MORC3Q14149 939 aa12.71□□□□□ -0.37
CLTC-215ENST00000621829 TMED2Q15363 201 aa12.71□□□□□ -0.37
CLTC-215ENST00000621829 OLFML2BQ68BL8 750 aa12.71□□□□□ -0.37
CLTC-215ENST00000621829 MRPL50Q8N5N7 158 aaKnown RBP12.71□□□□□ -0.37
CLTC-215ENST00000621829 ENAHQ8N8S7 591 aaPredicted RBP12.71□□□□□ -0.37
CLTC-215ENST00000621829 STRIP2Q9ULQ0 834 aa12.71□□□□□ -0.37
CLTC-215ENST00000621829 NCBP1Q09161 790 aaKnown RBP12.71□□□□□ -0.37
CLTC-215ENST00000621829 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.71□□□□□ -0.37
CLTC-215ENST00000621829 USP28Q96RU2 1077 aa12.71□□□□□ -0.37
CLTC-215ENST00000621829 ABCB6Q9NP58 842 aa12.71□□□□□ -0.37
CLTC-215ENST00000621829 JAK2O60674 1132 aa12.71□□□□□ -0.37
CLTC-215ENST00000621829 TRPC5Q9UL62 973 aaPredicted RBP12.71□□□□□ -0.37
CLTC-215ENST00000621829 EMILIN1Q9Y6C2 1016 aa12.71□□□□□ -0.37
CLTC-215ENST00000621829 CHGBP05060 677 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 DDIT3P35638 169 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 MYO1EQ12965 1108 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 CCHCR1Q8TD31 782 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 ELAC2Q9BQ52 826 aaKnown RBP12.71□□□□□ -0.38
CLTC-215ENST00000621829 HLA-DOAP06340 250 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 DEUP1Q05D60 604 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 EHHADHQ08426 723 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 SMYD2Q9NRG4 433 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 PSDA5PKW4 1024 aaPredicted RBP12.71□□□□□ -0.38
CLTC-215ENST00000621829 TMTC4Q5T4D3 741 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 GABPB2Q8TAK5 448 aaPredicted RBP12.71□□□□□ -0.38
CLTC-215ENST00000621829 GRK7Q8WTQ7 553 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 FANCLQ9NW38 375 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 CHPF2Q9P2E5 772 aa12.71□□□□□ -0.38
CLTC-215ENST00000621829 ATF7P17544 494 aaPredicted RBP12.7□□□□□ -0.38
CLTC-215ENST00000621829 CCDC15Q0P6D6 951 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 NOVA2Q9UNW9 492 aaKnown RBP12.7□□□□□ -0.38
CLTC-215ENST00000621829 MAD1L1Q9Y6D9 718 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 TCP1P17987 556 aaKnown RBP12.7□□□□□ -0.38
CLTC-215ENST00000621829 SEPT2Q15019 361 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 MAML1Q92585 1016 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 RASSF7Q02833 373 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 NELFCDQ8IXH7 590 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 MAIP1Q8WWC4 291 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 DBNLQ9UJU6 430 aaKnown RBP12.7□□□□□ -0.38
CLTC-215ENST00000621829 BCRP11274 1271 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 PKD2L1Q9P0L9 805 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 COBLO75128 1261 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 ESRRAP11474 423 aaPredicted RBP12.7□□□□□ -0.38
CLTC-215ENST00000621829 SP4Q02446 784 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 PHKBQ93100 1093 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 DCTPP1Q9H773 170 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 SMYD3Q9H7B4 428 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 CACYBPQ9HB71 228 aaKnown RBP12.7□□□□□ -0.38
CLTC-215ENST00000621829 GIMAP4Q9NUV9 329 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 GNA11P29992 359 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 NCAPH2Q6IBW4 605 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 MIGA1Q8NAN2 632 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 ZNF229Q9UJW7 825 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 CFLARO15519 480 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 SPAG7O75391 227 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 NCF2P19878 526 aaPredicted RBP12.7□□□□□ -0.38
CLTC-215ENST00000621829 FOXD4Q12950 439 aaPredicted RBP12.7□□□□□ -0.38
CLTC-215ENST00000621829 PDCLQ13371 301 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 FCHSD1Q86WN1 690 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
CLTC-215ENST00000621829 LMNAP02545 664 aaKnown RBP12.69□□□□□ -0.38
CLTC-215ENST00000621829 RNASELQ05823 741 aaKnown RBP12.69□□□□□ -0.38
CLTC-215ENST00000621829 ASPHQ12797 758 aa12.69□□□□□ -0.38
CLTC-215ENST00000621829 BEND6Q5SZJ8 279 aaPredicted RBP12.69□□□□□ -0.38
CLTC-215ENST00000621829 TRIM56Q9BRZ2 755 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms