RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 SPECC1LQ69YQ0 1117 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 ANKRD18AQ8IVF6 992 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 ZNF34Q8IZ26 560 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 CCDC102AQ96A19 550 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 ZBTB10Q96DT7 871 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 FAN1Q9Y2M0 1017 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 RPS6KL1Q9Y6S9 549 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 CDHR2Q9BYE9 1310 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 TSPY2A6NKD2 308 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 IVLP07476 585 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
CDH1-214ENST00000621016 LRRC31Q6UY01 552 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 CEP57Q86XR8 500 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 SUGP1Q8IWZ8 645 aaKnown RBP12.05□□□□□ -0.48
CDH1-214ENST00000621016 CELF1Q92879 486 aaKnown RBP12.05□□□□□ -0.48
CDH1-214ENST00000621016 GPR101Q96P66 508 aaPredicted RBP12.05□□□□□ -0.48
CDH1-214ENST00000621016 MED15Q96RN5 788 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 RNF41Q9H4P4 317 aaPredicted RBP12.05□□□□□ -0.48
CDH1-214ENST00000621016 SUGCTQ9HAC7 445 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 CTNND2Q9UQB3 1225 aa12.05□□□□□ -0.48
CDH1-214ENST00000621016 KCPQ6ZWJ8 1503 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 TTC36A6NLP5 189 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 PRDX5P30044 214 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 GCKP35557 465 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 MEX3CQ5U5Q3 659 aaKnown RBP12.04□□□□□ -0.48
CDH1-214ENST00000621016 RRAGBQ5VZM2 374 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 DNAJC14Q6Y2X3 702 aaPredicted RBP12.04□□□□□ -0.48
CDH1-214ENST00000621016 IGSF22Q8N9C0 903 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 SHISA4Q96DD7 197 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 ZSCAN10Q96SZ4 725 aaPredicted RBP12.04□□□□□ -0.48
CDH1-214ENST00000621016 BPIFA3Q9BQP9 254 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 VAT1LQ9HCJ6 419 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 ZRANB2O95218 330 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDH1-214ENST00000621016 KRT2P35908 639 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 RBL2Q08999 1139 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.04□□□□□ -0.48
CDH1-214ENST00000621016 GNL3LQ9NVN8 582 aaKnown RBP12.04□□□□□ -0.48
CDH1-214ENST00000621016 USP54Q70EL1 1684 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 KIF2AO00139 706 aaPredicted RBP12.04□□□□□ -0.48
CDH1-214ENST00000621016 ZSCAN12O43309 604 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 INTS5Q6P9B9 1019 aaKnown RBP12.04□□□□□ -0.48
CDH1-214ENST00000621016 PARD3BQ8TEW8 1205 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 MCM9Q9NXL9 1143 aa12.04□□□□□ -0.48
CDH1-214ENST00000621016 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
CDH1-214ENST00000621016 N4BP3O15049 544 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 RPSAP08865 295 aaKnown RBP12.03□□□□□ -0.48
CDH1-214ENST00000621016 GOLGA8HP0CJ92 632 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 ELF1P32519 619 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 RDXP35241 583 aaKnown RBP12.03□□□□□ -0.48
CDH1-214ENST00000621016 PPARDQ03181 441 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 MFSD4BQ5TF39 518 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 KCNV1Q6PIU1 500 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 NUCKS1Q9H1E3 243 aaKnown RBP12.03□□□□□ -0.48
CDH1-214ENST00000621016 KIF9Q9HAQ2 790 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 VEZTQ9HBM0 779 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 TAB2Q9NYJ8 693 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 STX8Q9UNK0 236 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 PP2D1A8MPX8 630 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 ABL1P00519 1130 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 MYBL1P10243 752 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 CASP14P31944 242 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 NF2P35240 595 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 EIF5P55010 431 aaKnown RBP12.03□□□□□ -0.48
CDH1-214ENST00000621016 TRIM65Q6PJ69 517 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 RASGRP2Q7LDG7 609 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 TC2NQ8N9U0 490 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 DYNLL2Q96FJ2 89 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 MRPL44Q9H9J2 332 aaKnown RBP12.03□□□□□ -0.48
CDH1-214ENST00000621016 TFR2Q9UP52 801 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 ABCC12Q96J65 1359 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 SSBP05455 408 aaKnown RBP eCLIP12.03□□□□□ -0.48
CDH1-214ENST00000621016 PIP4K2BP78356 416 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 MDM2Q00987 491 aaPredicted RBP12.03□□□□□ -0.48
CDH1-214ENST00000621016 NAA25Q14CX7 972 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 PTF1AQ7RTS3 328 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 EXOC4Q96A65 974 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 NUP88Q99567 741 aaPredicted RBP12.03□□□□□ -0.48
CDH1-214ENST00000621016 FOXP1Q9H334 677 aaPredicted RBP12.03□□□□□ -0.48
CDH1-214ENST00000621016 SRP68Q9UHB9 627 aaKnown RBP12.03□□□□□ -0.48
CDH1-214ENST00000621016 CEP131Q9UPN4 1083 aa12.03□□□□□ -0.48
CDH1-214ENST00000621016 ARHGAP6O43182 974 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 USP17L8P0C7I0 530 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 TBC1D8BQ0IIM8 1120 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 ZNF569Q5MCW4 686 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 OTUD6BQ8N6M0 293 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 MLKLQ8NB16 471 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 PAGE5Q96GU1 130 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 SAP30BPQ9UHR5 308 aaKnown RBP12.02□□□□□ -0.49
CDH1-214ENST00000621016 SRPRBQ9Y5M8 271 aaKnown RBP12.02□□□□□ -0.49
CDH1-214ENST00000621016 KLHL33A6NCF5 533 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 GNAT2P19087 354 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 SETQ01105 290 aaPredicted RBP12.02□□□□□ -0.49
CDH1-214ENST00000621016 KIF4BQ2VIQ3 1234 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 TTC38Q5R3I4 469 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 ACRBPQ8NEB7 543 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 CDC5LQ99459 802 aaKnown RBP12.02□□□□□ -0.49
CDH1-214ENST00000621016 TRIM6Q9C030 488 aaPredicted RBP12.02□□□□□ -0.49
CDH1-214ENST00000621016 TMEM165Q9HC07 324 aa12.02□□□□□ -0.49
CDH1-214ENST00000621016 PHRF1Q9P1Y6 1649 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms