RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ZBTB7AO95365 584 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 MX2P20592 715 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 SERPINB6P35237 376 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 TMED1Q13445 227 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 MCTP2Q6DN12 878 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 RSBN1LQ6PCB5 846 aaPredicted RBP7.88□□□□□ -1.15
COLCA1-205ENST00000620864 SV2BQ7L1I2 683 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 ZNF804AQ7Z570 1209 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 SRRM1Q8IYB3 904 aaKnown RBP7.88□□□□□ -1.15
COLCA1-205ENST00000620864 ZNF513Q8N8E2 541 aaPredicted RBP7.88□□□□□ -1.15
COLCA1-205ENST00000620864 BCAS4Q8TDM0 211 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 EXOC4Q96A65 974 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 RRP15Q9Y3B9 282 aaKnown RBP7.88□□□□□ -1.15
COLCA1-205ENST00000620864 JRKLQ9Y4A0 524 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 IVNS1ABPQ9Y6Y0 642 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 NPHP4O75161 1426 aaPredicted RBP7.88□□□□□ -1.15
COLCA1-205ENST00000620864 TTI1O43156 1089 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 FBLN1P23142 703 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 YWHAEP62258 255 aaKnown RBP7.88□□□□□ -1.15
COLCA1-205ENST00000620864 MRPL40Q9NQ50 206 aaKnown RBP7.88□□□□□ -1.15
COLCA1-205ENST00000620864 AFG3L2Q9Y4W6 797 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 ARHGEF10O15013 1369 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 CEP19Q96LK0 163 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 IRAK4Q9NWZ3 460 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 PYGBP11216 843 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 TCP1P17987 556 aaKnown RBP7.88□□□□□ -1.15
COLCA1-205ENST00000620864 LONP1P36776 959 aaKnown RBP7.88□□□□□ -1.15
COLCA1-205ENST00000620864 GARSP41250 739 aaKnown RBP7.88□□□□□ -1.15
COLCA1-205ENST00000620864 CDR2Q01850 454 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 TBC1D8BQ0IIM8 1120 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 RABGGTAQ92696 567 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 SYNRGQ9UMZ2 1314 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 ARHGAP10A1A4S6 786 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 RMDN2Q96LZ7 410 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 DDX41Q9UJV9 622 aaKnown RBP7.88□□□□□ -1.15
COLCA1-205ENST00000620864 VPS41P49754 854 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 MCMDC2Q4G0Z9 681 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 ISM2Q6H9L7 571 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 LDHAL6AQ6ZMR3 332 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 CCDC138Q96M89 665 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 ESYT1Q9BSJ8 1104 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 PTPN23Q9H3S7 1636 aa7.88□□□□□ -1.15
COLCA1-205ENST00000620864 RASGRF2O14827 1237 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 BAG2O95816 211 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 SMTNP53814 917 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 IRX1P78414 480 aaPredicted RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PPP2R5BQ15173 497 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 SND1Q7KZF4 910 aaKnown RBP eCLIP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 SSH1Q8WYL5 1049 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PAIP2BQ9ULR5 123 aaKnown RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 YEATS2Q9ULM3 1422 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 KRT8P05787 483 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 CLTAP09496 248 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 GJC1P36383 396 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 ARID5AQ03989 594 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 DNM1Q05193 864 aaKnown RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PPP2R5DQ14738 602 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 LCA5Q86VQ0 697 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 C2orf69Q8N8R5 385 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 SPDYE3A6NKU9 549 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 RBM6P78332 1123 aaKnown RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 HAUS3Q68CZ6 603 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 C2CD5Q86YS7 1000 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 ENAHQ8N8S7 591 aaPredicted RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 LRRC8CQ8TDW0 803 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 DHX58Q96C10 678 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 CLSTN2Q9H4D0 955 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 C14orf93Q9H972 538 aaKnown RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PICK1Q9NRD5 415 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 IQSEC3Q9UPP2 1182 aaPredicted RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 THAP12O43422 761 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 APLFQ8IW19 511 aaPredicted RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 CCDC105Q8IYK2 499 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 USP19O94966 1318 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PPP1R2P3Q6NXS1 205 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PEX26Q7Z412 305 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 TTC30AQ86WT1 665 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 CDAN1Q8IWY9 1227 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 TEKT1Q969V4 418 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PANK2Q9BZ23 570 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 MRPL46Q9H2W6 279 aaKnown RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PALMDQ9NP74 551 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PPANQ9NQ55 473 aaKnown RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 HYOU1Q9Y4L1 999 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 SP4Q02446 784 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 TMTC3Q6ZXV5 915 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 NFATC2IPQ8NCF5 419 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PROCA1Q8NCQ7 364 aaPredicted RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PIP4K2CQ8TBX8 421 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 ABTB1Q969K4 478 aaPredicted RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 NACA2Q9H009 215 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 NOP53Q9NZM5 478 aaKnown RBP7.87□□□□□ -1.15
COLCA1-205ENST00000620864 TEKT2Q9UIF3 430 aa7.87□□□□□ -1.15
COLCA1-205ENST00000620864 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 KPNA2P52292 529 aaKnown RBP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 HDAC4P56524 1084 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 RAPGEF1Q13905 1077 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 RASA3Q14644 834 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 MMS22LQ6ZRQ5 1243 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 CCDC13Q8IYE1 715 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms