RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 GOLGA8HP0CJ92 632 aa17.59■□□□□ 0.41
PSMC3-213ENST00000619920 CAMK4Q16566 473 aa17.59■□□□□ 0.41
PSMC3-213ENST00000619920 FMR1NBQ8N0W7 255 aaPredicted RBP17.59■□□□□ 0.41
PSMC3-213ENST00000619920 FAM151AQ8WW52 585 aa17.59■□□□□ 0.41
PSMC3-213ENST00000619920 ANP32BQ92688 251 aaKnown RBP17.59■□□□□ 0.41
PSMC3-213ENST00000619920 RRP36Q96EU6 259 aaKnown RBP17.59■□□□□ 0.41
PSMC3-213ENST00000619920 RIOX1Q9H6W3 641 aa17.59■□□□□ 0.41
PSMC3-213ENST00000619920 BARHL2Q9NY43 387 aa17.59■□□□□ 0.41
PSMC3-213ENST00000619920 NYAP2Q9P242 653 aa17.59■□□□□ 0.41
PSMC3-213ENST00000619920 HERC5Q9UII4 1024 aaKnown RBP17.59■□□□□ 0.41
PSMC3-213ENST00000619920 MTMR7Q9Y216 660 aa17.59■□□□□ 0.41
PSMC3-213ENST00000619920 FAM237AA0A1B0GTK4 181 aa17.58■□□□□ 0.41
PSMC3-213ENST00000619920 MARCKSP29966 332 aaPredicted RBP17.58■□□□□ 0.41
PSMC3-213ENST00000619920 TRAPPC10P48553 1259 aa17.58■□□□□ 0.41
PSMC3-213ENST00000619920 TMEM179Q6ZVK1 233 aa17.58■□□□□ 0.41
PSMC3-213ENST00000619920 KRI1Q8N9T8 703 aaKnown RBP17.58■□□□□ 0.41
PSMC3-213ENST00000619920 DAGLBQ8NCG7 672 aa17.58■□□□□ 0.41
PSMC3-213ENST00000619920 CCDC12Q8WUD4 166 aaPredicted RBP17.58■□□□□ 0.41
PSMC3-213ENST00000619920 PIBF1Q8WXW3 757 aa17.58■□□□□ 0.41
PSMC3-213ENST00000619920 ZBED3Q96IU2 234 aaPredicted RBP17.58■□□□□ 0.41
PSMC3-213ENST00000619920 PCDHA4Q9UN74 947 aa17.58■□□□□ 0.41
PSMC3-213ENST00000619920 BCS1LQ9Y276 419 aa17.58■□□□□ 0.41
PSMC3-213ENST00000619920 TRIM75PA6NK02 468 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 hCG_1984214I3L0E3 225 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 STXBP3O00186 592 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 VEGFAP15692 232 aaPredicted RBP17.57■□□□□ 0.4
PSMC3-213ENST00000619920 RPS12P25398 132 aaKnown RBP17.57■□□□□ 0.4
PSMC3-213ENST00000619920 UVSSAQ2YD98 709 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 GPATCH4Q5T3I0 446 aaKnown RBP17.57■□□□□ 0.4
PSMC3-213ENST00000619920 BLIDQ8IZY5 108 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 LRRC47Q8N1G4 583 aaKnown RBP17.57■□□□□ 0.4
PSMC3-213ENST00000619920 ZNF713Q8N859 430 aaPredicted RBP17.57■□□□□ 0.4
PSMC3-213ENST00000619920 CSRNP1Q96S65 589 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 SEC63Q9UGP8 760 aaKnown RBP17.57■□□□□ 0.4
PSMC3-213ENST00000619920 PCDHB6Q9Y5E3 794 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 A0A1B0GVL5 298 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 MYO1BO43795 1136 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 NDUFA8P51970 172 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 ZNF543Q08ER8 600 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 WWC2Q6AWC2 1192 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 FAM83AQ86UY5 434 aa17.57■□□□□ 0.4
PSMC3-213ENST00000619920 ZNF579Q8NAF0 562 aaKnown RBP17.57■□□□□ 0.4
PSMC3-213ENST00000619920 TCP10L2B9ZVM9 353 aa17.56■□□□□ 0.4
PSMC3-213ENST00000619920 PTPREP23469 700 aa17.56■□□□□ 0.4
PSMC3-213ENST00000619920 EIF6P56537 245 aaKnown RBP17.56■□□□□ 0.4
PSMC3-213ENST00000619920 ABCB5Q2M3G0 1257 aa17.56■□□□□ 0.4
PSMC3-213ENST00000619920 RESP18Q5W5W9 173 aa17.56■□□□□ 0.4
PSMC3-213ENST00000619920 HEATR3Q7Z4Q2 680 aa17.56■□□□□ 0.4
PSMC3-213ENST00000619920 GPKOWQ92917 476 aaPredicted RBP eCLIP17.56■□□□□ 0.4
PSMC3-213ENST00000619920 TIGD1Q96MW7 591 aa17.56■□□□□ 0.4
PSMC3-213ENST00000619920 HPSEQ9Y251 543 aa17.56■□□□□ 0.4
PSMC3-213ENST00000619920 BAZ2BQ9UIF8 2168 aaKnown RBP17.55■□□□□ 0.4
PSMC3-213ENST00000619920 CLRN2A0PK11 232 aa17.55■□□□□ 0.4
PSMC3-213ENST00000619920 PSDA5PKW4 1024 aaPredicted RBP17.55■□□□□ 0.4
PSMC3-213ENST00000619920 FAM196BA6NMK8 535 aa17.55■□□□□ 0.4
PSMC3-213ENST00000619920 PFKFB1P16118 471 aa17.55■□□□□ 0.4
PSMC3-213ENST00000619920 ZNF280AP59817 542 aaPredicted RBP17.55■□□□□ 0.4
PSMC3-213ENST00000619920 TYRO3Q06418 890 aa17.55■□□□□ 0.4
PSMC3-213ENST00000619920 EARS2Q5JPH6 523 aaKnown RBP17.55■□□□□ 0.4
PSMC3-213ENST00000619920 RBM26Q5T8P6 1007 aaKnown RBP17.55■□□□□ 0.4
PSMC3-213ENST00000619920 SASS6Q6UVJ0 657 aa17.55■□□□□ 0.4
PSMC3-213ENST00000619920 RASGRP2Q7LDG7 609 aa17.55■□□□□ 0.4
PSMC3-213ENST00000619920 CLEC10AQ8IUN9 316 aa17.55■□□□□ 0.4
PSMC3-213ENST00000619920 CKAP2LQ8IYA6 745 aa17.55■□□□□ 0.4
PSMC3-213ENST00000619920 ZMYND12Q9H0C1 365 aa17.55■□□□□ 0.4
PSMC3-213ENST00000619920 FBXO2Q9UK22 296 aaPredicted RBP17.55■□□□□ 0.4
PSMC3-213ENST00000619920 SYNPO2Q9UMS6 1093 aa17.55■□□□□ 0.4
PSMC3-213ENST00000619920 SRPRBQ9Y5M8 271 aaKnown RBP17.55■□□□□ 0.4
PSMC3-213ENST00000619920 CNTNAP1P78357 1384 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 FAM205CA6NFA0 338 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 M0R2N6 131 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 ZNF202O95125 648 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 CAVIN2O95810 425 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 EEF2P13639 858 aaKnown RBP17.54■□□□□ 0.4
PSMC3-213ENST00000619920 ATP2B2Q01814 1243 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 TYW1BQ6NUM6 668 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 SHC4Q6S5L8 630 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 RNF214Q8ND24 703 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 DCAF4Q8WV16 495 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.54■□□□□ 0.4
PSMC3-213ENST00000619920 MYOZ2Q9NPC6 264 aa17.54■□□□□ 0.4
PSMC3-213ENST00000619920 FRMPD2Q68DX3 1309 aaPredicted RBP17.53■□□□□ 0.4
PSMC3-213ENST00000619920 ESYT2A0FGR8 921 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 TBC1D12O60347 775 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 GNA11P29992 359 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 CCDC173Q0VFZ6 552 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 SEPT2Q15019 361 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 TTC38Q5R3I4 469 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 PIGSQ96S52 555 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 SDF4Q9BRK5 362 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 UBA5Q9GZZ9 404 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 CPVLQ9H3G5 476 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 FZD9O00144 591 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 WNT10BO00744 389 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 ATP2B1P20020 1258 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 SYKP43405 635 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 NAPAP54920 295 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 ICA1Q05084 483 aa17.53■□□□□ 0.4
PSMC3-213ENST00000619920 PIK3AP1Q6ZUJ8 805 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms