RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 UBA5Q9GZZ9 404 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 CUEDC2Q9H467 287 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 PDS5AQ29RF7 1337 aaKnown RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 TMTC1Q8IUR5 882 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 NELFBQ8WX92 580 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 ARHGEF1Q92888 912 aaKnown RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 PODXL2Q9NZ53 605 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 TTF2Q9UNY4 1162 aaKnown RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 CCNT1O60563 726 aaKnown RBP11.17□□□□□ -0.62
CDH23-213ENST00000619887 MYL1P05976 194 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 CCT6AP40227 531 aaKnown RBP11.17□□□□□ -0.62
CDH23-213ENST00000619887 TNNI2P48788 182 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 CNNM4Q6P4Q7 775 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 SV2BQ7L1I2 683 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 OXER1Q8TDS5 423 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 LUC7L2Q9Y383 392 aaKnown RBP11.17□□□□□ -0.62
CDH23-213ENST00000619887 PARP3Q9Y6F1 533 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 MROH7-TTC4A0A0A0MT08 1334 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 SERPINB2P05120 415 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 IBSPP21815 317 aaPredicted RBP11.17□□□□□ -0.62
CDH23-213ENST00000619887 KCNJ6P48051 423 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 ADCY7P51828 1080 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 CABP7Q86V35 215 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 KRT222Q8N1A0 295 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 CEP112Q8N8E3 955 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 ERMNQ8TAM6 284 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 GPKOWQ92917 476 aaPredicted RBP eCLIP11.17□□□□□ -0.62
CDH23-213ENST00000619887 PPP1R13BQ96KQ4 1090 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 TRPC5Q9UL62 973 aaPredicted RBP11.17□□□□□ -0.62
CDH23-213ENST00000619887 HPSEQ9Y251 543 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 CRYBG1Q9Y4K1 1723 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 SMCO2A6NFE2 343 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 hCG_1984214I3L0E3 225 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 AP5Z1O43299 807 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 ATP1A3P13637 1013 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 MCM3P25205 808 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 KRT83P78385 493 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 CACNA2D4Q7Z3S7 1137 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 METTL16Q86W50 562 aaKnown RBP11.17□□□□□ -0.62
CDH23-213ENST00000619887 ZNF713Q8N859 430 aaPredicted RBP11.17□□□□□ -0.62
CDH23-213ENST00000619887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.17□□□□□ -0.62
CDH23-213ENST00000619887 H7C1D1 291 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 OR52Z1P0C646 297 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 PAGE5Q96GU1 130 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 AK8Q96MA6 479 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 RIOK1Q9BRS2 568 aaKnown RBP11.17□□□□□ -0.62
CDH23-213ENST00000619887 PHF20Q9BVI0 1012 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 VPS16Q9H269 839 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 BLZF1Q9H2G9 400 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 OGFRQ9NZT2 677 aa11.17□□□□□ -0.62
CDH23-213ENST00000619887 CTAGE9A4FU28 777 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 PDE4DQ08499 809 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 ENOX2Q16206 610 aaKnown RBP11.16□□□□□ -0.62
CDH23-213ENST00000619887 INF2Q27J81 1249 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 CYP26C1Q6V0L0 522 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 NEK8Q86SG6 692 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 STAMQ92783 540 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 GOLGA1Q92805 767 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 RPN1P04843 607 aaKnown RBP11.16□□□□□ -0.62
CDH23-213ENST00000619887 CYP2D6P10635 497 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 ALDH1B1P30837 517 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 GTF2F1P35269 517 aaKnown RBP eCLIP11.16□□□□□ -0.62
CDH23-213ENST00000619887 MORC3Q14149 939 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 TTLL12Q14166 644 aaPredicted RBP11.16□□□□□ -0.62
CDH23-213ENST00000619887 KARSQ15046 597 aaKnown RBP11.16□□□□□ -0.62
CDH23-213ENST00000619887 DPP8Q6V1X1 898 aaPredicted RBP11.16□□□□□ -0.62
CDH23-213ENST00000619887 EHMT1Q9H9B1 1298 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.16□□□□□ -0.62
CDH23-213ENST00000619887 PPP2R2CQ9Y2T4 447 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 V9GYY5 206 aaPredicted RBP11.16□□□□□ -0.62
CDH23-213ENST00000619887 DISP2A7MBM2 1401 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 GTF2IP78347 998 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 CCDC40Q4G0X9 1142 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 GRAMD1CQ8IYS0 662 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 EPSTI1Q96J88 318 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 MAP3K14Q99558 947 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 NUP58Q9BVL2 599 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 NBPF3Q9H094 633 aa11.16□□□□□ -0.62
CDH23-213ENST00000619887 GRM4Q14833 912 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 ARID5BQ14865 1188 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 TMX1Q9H3N1 280 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 DIXDC1Q155Q3 683 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 SKIDA1Q1XH10 827 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 C12orf60Q5U649 245 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 CNKSR2Q8WXI2 1034 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 TSC1Q92574 1164 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 PLIN2Q99541 437 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 PHLPP2Q6ZVD8 1323 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 ADKP55263 362 aaKnown RBP11.15□□□□□ -0.62
CDH23-213ENST00000619887 ATP2C1P98194 919 aaPredicted RBP11.15□□□□□ -0.62
CDH23-213ENST00000619887 SEC23AQ15436 765 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 CALCRLQ16602 461 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 ASPRV1Q53RT3 343 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
CDH23-213ENST00000619887 CSGALNACT2Q8N6G5 542 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 SH3RF3Q8TEJ3 882 aaPredicted RBP11.15□□□□□ -0.62
CDH23-213ENST00000619887 IQCDQ96DY2 449 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 DYNLL2Q96FJ2 89 aa11.15□□□□□ -0.62
CDH23-213ENST00000619887 GPCPD1Q9NPB8 672 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms