RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 PEX5LQ8IYB4 626 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 ANKRD24Q8TF21 1146 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 GPR101Q96P66 508 aaPredicted RBP4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 SELENOOQ9BVL4 669 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 CAPS2Q9BXY5 557 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 CYP4F11Q9HBI6 524 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 P4HA2O15460 535 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 KPNA6O60684 536 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 PRPF40AO75400 957 aaKnown RBP4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 USP2O75604 605 aaPredicted RBP4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 RHOBTB3O94955 611 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 PFKPQ01813 784 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 ESCO1Q5FWF5 840 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 RNF20Q5VTR2 975 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 HHATQ5VTY9 493 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 CATSPER4Q7RTX7 472 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 STK11IPQ8N1F8 1099 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 PRR7Q8TB68 274 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 SH3GL3Q99963 347 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 C2orf49Q9BVC5 232 aaPredicted RBP4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 ACBD3Q9H3P7 528 aa4.67□□□□□ -1.66
UBE2D3-233ENST00000618836 LINC00854A0A1B0GVQ3 168 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 PALM3A6NDB9 673 aaPredicted RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 H7C1W4 665 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 FOXD2O60548 495 aaPredicted RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 MASP1P48740 699 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 FANCCQ00597 558 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 NUCB1Q02818 461 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 LAMC2Q13753 1193 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 LVRNQ6Q4G3 990 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 PNMA8AQ86V59 439 aaPredicted RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 SLC7A5P1Q8MH63 180 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 SNX21Q969T3 373 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 ALPK1Q96QP1 1244 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 CCDC68Q9H2F9 335 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 HOMER2Q9NSB8 354 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 STIM2Q9P246 746 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 CDV3Q9UKY7 258 aaKnown RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 LRRFIP2Q9Y608 721 aaKnown RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 EVC2Q86UK5 1308 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 LRRC10BA6NIK2 292 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 SMTNL1A8MU46 457 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 NR1I2O75469 434 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 CYP1A2P05177 515 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 TNNI2P48788 182 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 PRSS12P56730 875 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 COG2Q14746 738 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 BOLA3Q53S33 107 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 CFAP58Q5T655 872 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 CCDC65Q8IXS2 484 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 RPAP2Q8IXW5 612 aaPredicted RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 FLCNQ8NFG4 579 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 ERMNQ8TAM6 284 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 IPCEF1Q8WWN9 437 aaPredicted RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 RSPH14Q9UHP6 348 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 SNX5Q9Y5X3 404 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 RGPD8O14715 1765 aaPredicted RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 RGPD5Q99666 1765 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 DLEC1Q9Y238 1755 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 KIF2AO00139 706 aaPredicted RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 MCF2LO15068 1137 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 ZBED4O75132 1171 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 SMC2O95347 1197 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 INPP5BP32019 993 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 RXRGP48443 463 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 FXR1P51114 621 aaKnown RBP eCLIP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 GRIK3Q13003 919 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 ELOAQ14241 798 aaKnown RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 SMC1AQ14683 1233 aaKnown RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 KRT27Q7Z3Y8 459 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 DCLK2Q8N568 766 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 OR8H1Q8NGG4 311 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 CSRNP2Q9H175 543 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 C9orf78Q9NZ63 289 aaPredicted RBP4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 LMCD1Q9NZU5 365 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 PCDHGC5Q9Y5F6 944 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 TACC3Q9Y6A5 838 aa4.66□□□□□ -1.66
UBE2D3-233ENST00000618836 CDKN1CP49918 316 aaPredicted RBP4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 RCAN1P53805 252 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 FUT2Q10981 343 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 ACAP1Q15027 740 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 SLC4A8Q2Y0W8 1093 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 TTC31Q49AM3 519 aaPredicted RBP4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 MCF2L2Q86YR7 1114 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 PGBD3Q8N328 593 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 SUN5Q8TC36 379 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 BICD2Q8TD16 824 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 STK32AQ8WU08 396 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 TBC1D5Q92609 795 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 CRACR2AQ9BSW2 395 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 SMYD2Q9NRG4 433 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 IL20Q9NYY1 176 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 C2CD2Q9Y426 696 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 DICER1Q9UPY3 1922 aaKnown RBP4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 PLEKHG2Q9H7P9 1386 aa4.65□□□□□ -1.66
UBE2D3-233ENST00000618836 SNX2O60749 519 aa4.65□□□□□ -1.67
UBE2D3-233ENST00000618836 ADAMTS4O75173 837 aa4.65□□□□□ -1.67
UBE2D3-233ENST00000618836 B3GALNT1O75752 331 aa4.65□□□□□ -1.67
UBE2D3-233ENST00000618836 APBB3O95704 486 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms