RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 PTPREP23469 700 aa20.1■□□□□ 0.81
CNOT3-209ENST00000617930 KRT2P35908 639 aa20.1■□□□□ 0.81
CNOT3-209ENST00000617930 NOVP48745 357 aa20.1■□□□□ 0.81
CNOT3-209ENST00000617930 PRMT6Q96LA8 375 aaPredicted RBP20.1■□□□□ 0.81
CNOT3-209ENST00000617930 CPVLQ9H3G5 476 aa20.1■□□□□ 0.81
CNOT3-209ENST00000617930 FAM198AQ9UFP1 575 aa20.1■□□□□ 0.81
CNOT3-209ENST00000617930 MTMR7Q9Y216 660 aa20.1■□□□□ 0.81
CNOT3-209ENST00000617930 MYH6P13533 1939 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 PALM3A6NDB9 673 aaPredicted RBP20.09■□□□□ 0.81
CNOT3-209ENST00000617930 GOLGA8HP0CJ92 632 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 NT5C2P49902 561 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 HDLBPQ00341 1268 aaKnown RBP20.09■□□□□ 0.81
CNOT3-209ENST00000617930 CFAP100Q494V2 611 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 NIM1KQ8IY84 436 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 CEP95Q96GE4 821 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 OSBPL5Q9H0X9 879 aaPredicted RBP20.09■□□□□ 0.81
CNOT3-209ENST00000617930 SPON1Q9HCB6 807 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 SERPINA10Q9UK55 444 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 SYKP43405 635 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 DNTTIP2Q5QJE6 756 aaKnown RBP20.09■□□□□ 0.81
CNOT3-209ENST00000617930 USP49Q70CQ1 688 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 SH3BP5LQ7L8J4 393 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 JMYQ8N9B5 988 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 KRI1Q8N9T8 703 aaKnown RBP20.09■□□□□ 0.81
CNOT3-209ENST00000617930 GPKOWQ92917 476 aaPredicted RBP eCLIP20.09■□□□□ 0.81
CNOT3-209ENST00000617930 FHDC1Q9C0D6 1143 aaPredicted RBP20.09■□□□□ 0.81
CNOT3-209ENST00000617930 VPS33BQ9H267 617 aa20.09■□□□□ 0.81
CNOT3-209ENST00000617930 KIF5BP33176 963 aa20.08■□□□□ 0.8
CNOT3-209ENST00000617930 RBM5P52756 815 aaKnown RBP eCLIP20.08■□□□□ 0.8
CNOT3-209ENST00000617930 STX1AQ16623 288 aa20.08■□□□□ 0.8
CNOT3-209ENST00000617930 LONRF3Q496Y0 759 aa20.08■□□□□ 0.8
CNOT3-209ENST00000617930 DHX40Q8IX18 779 aaKnown RBP20.08■□□□□ 0.8
CNOT3-209ENST00000617930 TDRD3Q9H7E2 651 aaKnown RBP20.08■□□□□ 0.8
CNOT3-209ENST00000617930 XBP1P17861 261 aa20.07■□□□□ 0.8
CNOT3-209ENST00000617930 FOXP4Q8IVH2 680 aaPredicted RBP20.07■□□□□ 0.8
CNOT3-209ENST00000617930 ZNF830Q96NB3 372 aaPredicted RBP20.07■□□□□ 0.8
CNOT3-209ENST00000617930 DPCR1Q3MIW9 517 aa20.07■□□□□ 0.8
CNOT3-209ENST00000617930 CLEC10AQ8IUN9 316 aa20.07■□□□□ 0.8
CNOT3-209ENST00000617930 DDTLA6NHG4 134 aaPredicted RBP20.06■□□□□ 0.8
CNOT3-209ENST00000617930 FOXN1O15353 648 aa20.06■□□□□ 0.8
CNOT3-209ENST00000617930 TCP10Q12799 353 aa20.06■□□□□ 0.8
CNOT3-209ENST00000617930 TIGD1Q96MW7 591 aa20.06■□□□□ 0.8
CNOT3-209ENST00000617930 DNAJC18Q9H819 358 aa20.06■□□□□ 0.8
CNOT3-209ENST00000617930 KCNH3Q9ULD8 1083 aa20.06■□□□□ 0.8
CNOT3-209ENST00000617930 SRPRBQ9Y5M8 271 aaKnown RBP20.06■□□□□ 0.8
CNOT3-209ENST00000617930 LTBP3Q9NS15 1303 aa20.05■□□□□ 0.8
CNOT3-209ENST00000617930 AKR1B1P15121 316 aa20.05■□□□□ 0.8
CNOT3-209ENST00000617930 CCDC178Q5BJE1 867 aa20.05■□□□□ 0.8
CNOT3-209ENST00000617930 USP17L2Q6R6M4 530 aa20.05■□□□□ 0.8
CNOT3-209ENST00000617930 METTL16Q86W50 562 aaKnown RBP20.05■□□□□ 0.8
CNOT3-209ENST00000617930 TTC12Q9H892 705 aaPredicted RBP20.05■□□□□ 0.8
CNOT3-209ENST00000617930 ZNF287Q9HBT7 754 aa20.05■□□□□ 0.8
CNOT3-209ENST00000617930 BIN1O00499 593 aa20.05■□□□□ 0.8
CNOT3-209ENST00000617930 IDI2Q9BXS1 227 aa20.05■□□□□ 0.8
CNOT3-209ENST00000617930 CSRNP2Q9H175 543 aa20.05■□□□□ 0.8
CNOT3-209ENST00000617930 IGKV6D-41A0A0C4DH26 115 aa20.04■□□□□ 0.8
CNOT3-209ENST00000617930 M0R2N6 131 aa20.04■□□□□ 0.8
CNOT3-209ENST00000617930 NLRP5P59047 1200 aa20.04■□□□□ 0.8
CNOT3-209ENST00000617930 RBM10P98175 930 aaKnown RBP20.04■□□□□ 0.8
CNOT3-209ENST00000617930 MDM2Q00987 491 aaPredicted RBP20.04■□□□□ 0.8
CNOT3-209ENST00000617930 PNOCQ13519 176 aa20.04■□□□□ 0.8
CNOT3-209ENST00000617930 ZNF174Q15697 407 aa20.04■□□□□ 0.8
CNOT3-209ENST00000617930 WWC2Q6AWC2 1192 aa20.04■□□□□ 0.8
CNOT3-209ENST00000617930 PDCL3Q9H2J4 239 aa20.04■□□□□ 0.8
CNOT3-209ENST00000617930 ANO10Q9NW15 660 aa20.04■□□□□ 0.8
CNOT3-209ENST00000617930 SPDYE2BA6NHP3 402 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 TRIM75PA6NK02 468 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 FAM196BA6NMK8 535 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 EGFRP00533 1210 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 SPDYE6P0CI01 402 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 SHMT1P34896 483 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 SHROOM1Q2M3G4 852 aaPredicted RBP20.03■□□□□ 0.8
CNOT3-209ENST00000617930 ISM2Q6H9L7 571 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 PIK3AP1Q6ZUJ8 805 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 PLA2G4DQ86XP0 818 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 RASGRP4Q8TDF6 673 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 TUBE1Q9UJT0 475 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 MYO3BQ8WXR4 1341 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 USP17L5A8MUK1 530 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 KLRF2D3W0D1 207 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 CAVIN2O95810 425 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 NOLC1Q14978 699 aaKnown RBP eCLIP20.03■□□□□ 0.8
CNOT3-209ENST00000617930 KRBA2Q6ZNG9 492 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 MTMR4Q9NYA4 1195 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 MYH8P13535 1937 aa20.03■□□□□ 0.8
CNOT3-209ENST00000617930 A0A087X0B3 334 aa20.02■□□□□ 0.8
CNOT3-209ENST00000617930 CLRN2A0PK11 232 aa20.02■□□□□ 0.8
CNOT3-209ENST00000617930 GOLGA6L6A8MZA4 724 aa20.02■□□□□ 0.8
CNOT3-209ENST00000617930 DYNC1I1O14576 645 aa20.02■□□□□ 0.8
CNOT3-209ENST00000617930 TPM3P06753 285 aa20.02■□□□□ 0.8
CNOT3-209ENST00000617930 CIAPIN1Q6FI81 312 aa20.02■□□□□ 0.8
CNOT3-209ENST00000617930 ZNF579Q8NAF0 562 aaKnown RBP20.02■□□□□ 0.8
CNOT3-209ENST00000617930 PLIN4Q96Q06 1357 aa20.02■□□□□ 0.8
CNOT3-209ENST00000617930 TOP1P11387 765 aaKnown RBP20.02■□□□□ 0.79
CNOT3-209ENST00000617930 EIF6P56537 245 aaKnown RBP20.02■□□□□ 0.79
CNOT3-209ENST00000617930 IL17AQ16552 155 aa20.02■□□□□ 0.79
CNOT3-209ENST00000617930 ZBED3Q96IU2 234 aaPredicted RBP20.02■□□□□ 0.79
CNOT3-209ENST00000617930 FAM13BQ9NYF5 915 aa20.02■□□□□ 0.79
CNOT3-209ENST00000617930 SERPINB13Q9UIV8 391 aa20.02■□□□□ 0.79
CNOT3-209ENST00000617930 MORC2Q9Y6X9 1032 aaPredicted RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms