RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PHKG1Q16816 387 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 USP17L2Q6R6M4 530 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 MFSD6Q6ZSS7 791 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 RSRC2Q7L4I2 434 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 TTF2Q9UNY4 1162 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 PYGMP11217 842 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 SLC32A1Q9H598 525 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 RBBP6Q7Z6E9 1792 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 ALDH1A2O94788 518 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 PARNO95453 639 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 ASNSP08243 561 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 SFPQP23246 707 aaKnown RBP eCLIP3.76□□□□□ -1.812e-6■■■■□ 26
LPP-220ENST00000617246 HNRNPH1P31943 449 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 TTLL4Q14679 1199 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 QSER1Q2KHR3 1735 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 DLG5Q8TDM6 1919 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 CCL15-CCL14A0A0B4J2E2 113 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 ASB14A6NK59 587 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 ZYXQ15942 572 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 CCL15Q16663 113 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 FKBP15Q5T1M5 1219 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 SMC3Q9UQE7 1217 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 TCP10L2B9ZVM9 353 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 FLOT1O75955 427 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 FCER1AP12319 257 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 DPP6P42658 865 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 RGS3P49796 1198 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 TESPA1A2RU30 521 aaPredicted RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 ENOX2Q16206 610 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 MED10Q9BTT4 135 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.76□□□□□ -1.81
LPP-220ENST00000617246 TRAF5O00463 557 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 FNBP1Q96RU3 617 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 USP20Q9Y2K6 914 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 ARID4AP29374 1257 aaPredicted RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 FBXO22Q8NEZ5 403 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 IP6K1Q92551 441 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 SLC12A6Q9UHW9 1150 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 SPECC1Q5M775 1068 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 STYK1Q6J9G0 422 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 KLHL41O60662 606 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 FOSP01100 380 aaPredicted RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 CCNG2Q16589 344 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 TRIM62Q9BVG3 475 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 COL5A2P05997 1499 aaPredicted RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 SPATA31A3Q5VYP0 1347 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 HSPA6P17066 643 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 ZAP70P43403 619 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 SNX17Q15036 470 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 ZNF830Q96NB3 372 aaPredicted RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 NEK1Q96PY6 1258 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 ITM2BQ9Y287 266 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 ZNF18P17022 549 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 IL15P40933 162 aaPredicted RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 FBXW4P57775 412 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 WTAPQ15007 396 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 PDXDC2PQ6P474 469 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 NSUN7Q8NE18 718 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 KIF1BPQ96EK5 621 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 TMEM169Q96HH4 297 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 DHX36Q9H2U1 1008 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 CUEDC2Q9H467 287 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 SEPT3Q9UH03 358 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 GINS2Q9Y248 185 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 GOLIM4O00461 696 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 USP17L8P0C7I0 530 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 ANO6Q4KMQ2 910 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 RNF187Q5TA31 235 aaPredicted RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 COL22A1Q8NFW1 1626 aaPredicted RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 ALPPL2P10696 532 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 THG1LQ9NWX6 298 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 DICER1Q9UPY3 1922 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 ZNF638Q14966 1978 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 HOXC9P31274 260 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 STAT2P52630 851 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 LARP1BQ659C4 914 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 PPP2R2DQ66LE6 453 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 SRGAP1Q7Z6B7 1085 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 FAM160B2Q86V87 743 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 WNK4Q96J92 1243 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 STK10O94804 968 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 BRD1O95696 1058 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 PPP2R5AQ15172 486 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 TBC1D25Q3MII6 688 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 ZNF713Q8N859 430 aaPredicted RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 FHDC1Q9C0D6 1143 aaPredicted RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 IL16Q14005 1332 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 SYNGAP1Q96PV0 1343 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 HSPA5P11021 654 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 MFSD14BQ5SR56 506 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 ZNF790Q6PG37 636 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 BRINP3Q76B58 766 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 HPS3Q969F9 1004 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 ZNF197O14709 1029 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 STX10O60499 249 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 PPIGQ13427 754 aaKnown RBP eCLIP3.75□□□□□ -1.816e-7■■■□□ 15.1
LPP-220ENST00000617246 TRPC3Q13507 836 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 SHDQ96IW2 340 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 PSMD1Q99460 953 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 ELL2O00472 640 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms