RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 GOLGA6DP0CG33 693 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 TDRD7Q8NHU6 1098 aaKnown RBP20.67■□□□□ 0.9
CDH23-212ENST00000616684 OSBP2Q969R2 916 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 GOLGA6AQ9NYA3 693 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 KDM3AQ9Y4C1 1321 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 GALNT17Q6IS24 598 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 GPBP1Q86WP2 473 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 GPR161Q8N6U8 529 aaKnown RBP20.67■□□□□ 0.9
CDH23-212ENST00000616684 SUPT20HQ8NEM7 779 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 PI4K2BQ8TCG2 481 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 SYMPKQ92797 1274 aaKnown RBP20.67■□□□□ 0.9
CDH23-212ENST00000616684 ATG3Q9NT62 314 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 POLR3EQ9NVU0 708 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 ZNF215Q9UL58 517 aaPredicted RBP20.67■□□□□ 0.9
CDH23-212ENST00000616684 ZNF804BA4D1E1 1349 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 ERCC5P28715 1186 aaPredicted RBP20.67■□□□□ 0.9
CDH23-212ENST00000616684 ERCC6LQ2NKX8 1250 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 PEX26Q7Z412 305 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 NKIRAS1Q9NYS0 192 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 PPP2R2CQ9Y2T4 447 aa20.67■□□□□ 0.9
CDH23-212ENST00000616684 NDUFAB1O14561 156 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 BTDP43251 543 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 PODXL2Q9NZ53 605 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 TSKSQ9UJT2 592 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 PREX2Q70Z35 1606 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 GOLGA6BA6NDN3 693 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 GAS7O60861 476 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 ADD2P35612 726 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 TRPC3Q13507 836 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 LIN9Q5TKA1 542 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 DAAM2Q86T65 1068 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 SMAP1Q8IYB5 467 aaPredicted RBP20.66■□□□□ 0.9
CDH23-212ENST00000616684 RNF26Q9BY78 433 aaPredicted RBP20.66■□□□□ 0.9
CDH23-212ENST00000616684 WDR17Q8IZU2 1322 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 KIF1BO60333 1816 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 ZBED4O75132 1171 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 LARGE1O95461 756 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 BCRP11274 1271 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 SND1Q7KZF4 910 aaKnown RBP eCLIP20.66■□□□□ 0.9
CDH23-212ENST00000616684 RDH13Q8NBN7 331 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 CHURC1Q8WUH1 139 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 RCOR1Q9UKL0 485 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 C10orf67Q8IYJ2 551 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 KIFC2Q96AC6 838 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 MAK16Q9BXY0 300 aaKnown RBP20.66■□□□□ 0.9
CDH23-212ENST00000616684 SEC31BQ9NQW1 1179 aa20.66■□□□□ 0.9
CDH23-212ENST00000616684 GNA14O95837 355 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 FTOQ9C0B1 505 aaKnown RBP eCLIP20.65■□□□□ 0.9
CDH23-212ENST00000616684 SERPINA10Q9UK55 444 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 PAK2Q13177 524 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 NECTIN1Q15223 517 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 KIAA1524Q8TCG1 905 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 FOXP1Q9H334 677 aaPredicted RBP20.65■□□□□ 0.9
CDH23-212ENST00000616684 AGTPBP1Q9UPW5 1226 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 PPIP5K2O43314 1243 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 ARHGAP44Q17R89 818 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 GPATCH11Q8N954 259 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 CEP63Q96MT8 703 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 XRCC5P13010 732 aaKnown RBP20.65■□□□□ 0.9
CDH23-212ENST00000616684 SCNN1DP51172 638 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 PRR16Q569H4 304 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 SMC6Q96SB8 1091 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 PYCARDQ9ULZ3 195 aa20.65■□□□□ 0.9
CDH23-212ENST00000616684 RPN1P04843 607 aaKnown RBP20.64■□□□□ 0.9
CDH23-212ENST00000616684 VIMP08670 466 aaKnown RBP20.64■□□□□ 0.9
CDH23-212ENST00000616684 KIAA0825Q8IV33 1275 aa20.64■□□□□ 0.9
CDH23-212ENST00000616684 PPP6R2O75170 966 aa20.64■□□□□ 0.89
CDH23-212ENST00000616684 DPCR1Q3MIW9 517 aa20.64■□□□□ 0.89
CDH23-212ENST00000616684 NLRP10Q86W26 655 aa20.64■□□□□ 0.89
CDH23-212ENST00000616684 PUS7LQ9H0K6 701 aaKnown RBP20.64■□□□□ 0.89
CDH23-212ENST00000616684 NRBP1Q9UHY1 535 aa20.64■□□□□ 0.89
CDH23-212ENST00000616684 CPSF1Q10570 1443 aaKnown RBP20.64■□□□□ 0.89
CDH23-212ENST00000616684 LONP1P36776 959 aaKnown RBP20.64■□□□□ 0.89
CDH23-212ENST00000616684 GRM1Q13255 1194 aa20.64■□□□□ 0.89
CDH23-212ENST00000616684 KIF23Q02241 960 aaPredicted RBP20.64■□□□□ 0.89
CDH23-212ENST00000616684 GABPB1Q06547 395 aaPredicted RBP20.64■□□□□ 0.89
CDH23-212ENST00000616684 SYCE1Q8N0S2 351 aa20.64■□□□□ 0.89
CDH23-212ENST00000616684 EEF2KMTQ96G04 330 aa20.64■□□□□ 0.89
CDH23-212ENST00000616684 RPGRIP1Q96KN7 1286 aa20.64■□□□□ 0.89
CDH23-212ENST00000616684 LSM14BQ9BX40 385 aaKnown RBP20.64■□□□□ 0.89
CDH23-212ENST00000616684 NOP56O00567 594 aaKnown RBP20.63■□□□□ 0.89
CDH23-212ENST00000616684 CEP57Q86XR8 500 aa20.63■□□□□ 0.89
CDH23-212ENST00000616684 LINC00301Q8NCQ3 95 aa20.63■□□□□ 0.89
CDH23-212ENST00000616684 ARMCX3Q9UH62 379 aaPredicted RBP20.63■□□□□ 0.89
CDH23-212ENST00000616684 ASIC3Q9UHC3 531 aa20.63■□□□□ 0.89
CDH23-212ENST00000616684 STAT1P42224 750 aa20.63■□□□□ 0.89
CDH23-212ENST00000616684 TRIM58Q8NG06 486 aa20.63■□□□□ 0.89
CDH23-212ENST00000616684 GDAP1L1Q96MZ0 367 aa20.63■□□□□ 0.89
CDH23-212ENST00000616684 GSDMAQ96QA5 445 aa20.63■□□□□ 0.89
CDH23-212ENST00000616684 GINS2Q9Y248 185 aa20.63■□□□□ 0.89
CDH23-212ENST00000616684 PDE6BP35913 854 aa20.62■□□□□ 0.89
CDH23-212ENST00000616684 SETDB1Q15047 1291 aa20.62■□□□□ 0.89
CDH23-212ENST00000616684 RUFY4Q6ZNE9 571 aa20.62■□□□□ 0.89
CDH23-212ENST00000616684 SLC39A2Q9NP94 309 aa20.62■□□□□ 0.89
CDH23-212ENST00000616684 FAM169AQ9Y6X4 670 aa20.62■□□□□ 0.89
CDH23-212ENST00000616684 HEG1Q9ULI3 1381 aa20.62■□□□□ 0.89
CDH23-212ENST00000616684 FMNL1O95466 1100 aaPredicted RBP20.62■□□□□ 0.89
CDH23-212ENST00000616684 WHAMMP3Q1A5X7 153 aa20.62■□□□□ 0.89
CDH23-212ENST00000616684 PABPN1LA6NDY0 278 aaKnown RBP20.62■□□□□ 0.89
CDH23-212ENST00000616684 SEMA3EO15041 775 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms