RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 F13A1P00488 732 aa27.16■■□□□ 1.94
CCND3-223ENST00000616010 SLC1A4P43007 532 aa27.16■■□□□ 1.94
CCND3-223ENST00000616010 SLC35G1Q2M3R5 365 aa27.16■■□□□ 1.94
CCND3-223ENST00000616010 OTUD7BQ6GQQ9 843 aa27.16■■□□□ 1.94
CCND3-223ENST00000616010 KCTD1Q719H9 257 aa27.16■■□□□ 1.94
CCND3-223ENST00000616010 ZNF526Q8TF50 670 aaPredicted RBP27.16■■□□□ 1.94
CCND3-223ENST00000616010 GPCPD1Q9NPB8 672 aa27.16■■□□□ 1.94
CCND3-223ENST00000616010 OTOFQ9HC10 1997 aa27.16■■□□□ 1.94
CCND3-223ENST00000616010 CYTH3O43739 400 aa27.16■■□□□ 1.94
CCND3-223ENST00000616010 NDUFB10O96000 172 aa27.16■■□□□ 1.94
CCND3-223ENST00000616010 DCAF4Q8WV16 495 aa27.16■■□□□ 1.94
CCND3-223ENST00000616010 PAPPA2Q9BXP8 1791 aa27.15■■□□□ 1.94
CCND3-223ENST00000616010 GPATCH4Q5T3I0 446 aaKnown RBP27.15■■□□□ 1.94
CCND3-223ENST00000616010 FERMT3Q86UX7 667 aa27.15■■□□□ 1.94
CCND3-223ENST00000616010 SPZ1Q9BXG8 430 aa27.15■■□□□ 1.94
CCND3-223ENST00000616010 SH2D4AQ9H788 454 aa27.15■■□□□ 1.94
CCND3-223ENST00000616010 GOPCQ9HD26 462 aa27.15■■□□□ 1.94
CCND3-223ENST00000616010 USP2O75604 605 aaPredicted RBP27.14■■□□□ 1.94
CCND3-223ENST00000616010 NF2P35240 595 aa27.14■■□□□ 1.94
CCND3-223ENST00000616010 PKN1Q16512 942 aa27.14■■□□□ 1.94
CCND3-223ENST00000616010 FBXO18Q8NFZ0 1043 aa27.14■■□□□ 1.94
CCND3-223ENST00000616010 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.14■■□□□ 1.947e-9■□□□□ 9.6
CCND3-223ENST00000616010 PICK1Q9NRD5 415 aa27.14■■□□□ 1.94
CCND3-223ENST00000616010 PPP1R12BO60237 982 aaPredicted RBP27.14■■□□□ 1.93
CCND3-223ENST00000616010 ZYXQ15942 572 aaKnown RBP27.14■■□□□ 1.93
CCND3-223ENST00000616010 MAP1SQ66K74 1059 aaPredicted RBP27.14■■□□□ 1.93
CCND3-223ENST00000616010 SPICE1Q8N0Z3 855 aa27.14■■□□□ 1.93
CCND3-223ENST00000616010 GMCL1Q96IK5 515 aa27.14■■□□□ 1.93
CCND3-223ENST00000616010 FEZ1Q99689 392 aa27.14■■□□□ 1.93
CCND3-223ENST00000616010 UBA5Q9GZZ9 404 aa27.14■■□□□ 1.93
CCND3-223ENST00000616010 NMRK2Q9NPI5 230 aa27.14■■□□□ 1.93
CCND3-223ENST00000616010 NUP88Q99567 741 aaPredicted RBP27.13■■□□□ 1.93
CCND3-223ENST00000616010 RBM27Q9P2N5 1060 aaKnown RBP27.13■■□□□ 1.93
CCND3-223ENST00000616010 TRIM29Q14134 588 aa27.12■■□□□ 1.93
CCND3-223ENST00000616010 FOXD4L6Q3SYB3 417 aaPredicted RBP27.12■■□□□ 1.93
CCND3-223ENST00000616010 TTBK2Q6IQ55 1244 aa27.12■■□□□ 1.93
CCND3-223ENST00000616010 FOXD4L3Q6VB84 417 aaPredicted RBP27.12■■□□□ 1.93
CCND3-223ENST00000616010 VCPKMTQ9H867 229 aa27.12■■□□□ 1.93
CCND3-223ENST00000616010 KIAA1755Q5JYT7 1200 aa27.11■■□□□ 1.93
CCND3-223ENST00000616010 KRT40Q6A162 431 aa27.11■■□□□ 1.93
CCND3-223ENST00000616010 MCTP1Q6DN14 999 aa27.11■■□□□ 1.93
CCND3-223ENST00000616010 SCG2P13521 617 aa27.11■■□□□ 1.93
CCND3-223ENST00000616010 PTPRAP18433 802 aa27.11■■□□□ 1.93
CCND3-223ENST00000616010 SMARCA1P28370 1054 aa27.11■■□□□ 1.93
CCND3-223ENST00000616010 PFKFB3Q16875 520 aaPredicted RBP27.11■■□□□ 1.93
CCND3-223ENST00000616010 NOL9Q5SY16 702 aaKnown RBP27.11■■□□□ 1.93
CCND3-223ENST00000616010 HOMER1Q86YM7 354 aa27.11■■□□□ 1.93
CCND3-223ENST00000616010 VAT1LQ9HCJ6 419 aa27.11■■□□□ 1.93
CCND3-223ENST00000616010 PHIPQ8WWQ0 1821 aa27.1■■□□□ 1.93
CCND3-223ENST00000616010 SLC16A2P36021 539 aa27.1■■□□□ 1.93
CCND3-223ENST00000616010 CHAMP1Q96JM3 812 aa27.1■■□□□ 1.93
CCND3-223ENST00000616010 RIOX1Q9H6W3 641 aa27.1■■□□□ 1.93
CCND3-223ENST00000616010 VPS54Q9P1Q0 977 aa27.1■■□□□ 1.93
CCND3-223ENST00000616010 BMP3P12645 472 aa27.09■■□□□ 1.93
CCND3-223ENST00000616010 IREB2P48200 963 aaKnown RBP27.09■■□□□ 1.93
CCND3-223ENST00000616010 VGLL4Q14135 290 aa27.09■■□□□ 1.93
CCND3-223ENST00000616010 LDHDQ86WU2 507 aa27.09■■□□□ 1.93
CCND3-223ENST00000616010 RRP36Q96EU6 259 aaKnown RBP27.09■■□□□ 1.93
CCND3-223ENST00000616010 GBP4Q96PP9 640 aa27.09■■□□□ 1.93
CCND3-223ENST00000616010 MAP3K9P80192 1104 aa27.09■■□□□ 1.93
CCND3-223ENST00000616010 TTLL12Q14166 644 aaPredicted RBP27.09■■□□□ 1.93
CCND3-223ENST00000616010 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.09■■□□□ 1.93
CCND3-223ENST00000616010 AS3MTQ9HBK9 375 aa27.09■■□□□ 1.93
CCND3-223ENST00000616010 TRAF5O00463 557 aa27.08■■□□□ 1.93
CCND3-223ENST00000616010 XBP1P17861 261 aa27.08■■□□□ 1.93
CCND3-223ENST00000616010 RESTQ13127 1097 aa27.08■■□□□ 1.93
CCND3-223ENST00000616010 RGS22Q8NE09 1264 aa27.08■■□□□ 1.93
CCND3-223ENST00000616010 PIGSQ96S52 555 aa27.08■■□□□ 1.93
CCND3-223ENST00000616010 SEC63Q9UGP8 760 aaKnown RBP27.08■■□□□ 1.93
CCND3-223ENST00000616010 KCNJ14Q9UNX9 436 aa27.08■■□□□ 1.93
CCND3-223ENST00000616010 BAG4O95429 457 aaKnown RBP27.07■■□□□ 1.92
CCND3-223ENST00000616010 MTMR2Q13614 643 aa27.07■■□□□ 1.92
CCND3-223ENST00000616010 FAM83BQ5T0W9 1011 aa27.07■■□□□ 1.92
CCND3-223ENST00000616010 ADGRF4Q8IZF3 695 aa27.07■■□□□ 1.92
CCND3-223ENST00000616010 GPKOWQ92917 476 aaPredicted RBP eCLIP27.07■■□□□ 1.922e-6■■■■□ 20.4
CCND3-223ENST00000616010 SHISA4Q96DD7 197 aa27.07■■□□□ 1.92
CCND3-223ENST00000616010 KIAA1683Q9H0B3 1180 aa27.07■■□□□ 1.92
CCND3-223ENST00000616010 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.07■■□□□ 1.92
CCND3-223ENST00000616010 ATP6V1DQ9Y5K8 247 aa27.07■■□□□ 1.92
CCND3-223ENST00000616010 CSADQ9Y600 493 aa27.07■■□□□ 1.92
CCND3-223ENST00000616010 SNCAIPQ9Y6H5 919 aa27.07■■□□□ 1.92
CCND3-223ENST00000616010 ZHX2Q9Y6X8 837 aa27.07■■□□□ 1.92
CCND3-223ENST00000616010 IKQ13123 557 aaPredicted RBP27.07■■□□□ 1.92
CCND3-223ENST00000616010 CLEC17AQ6ZS10 378 aa27.07■■□□□ 1.92
CCND3-223ENST00000616010 MOB2Q70IA6 237 aa27.07■■□□□ 1.92
CCND3-223ENST00000616010 USP17L10C9JJH3 530 aa27.06■■□□□ 1.92
CCND3-223ENST00000616010 TMEM232C9JQI7 657 aa27.06■■□□□ 1.92
CCND3-223ENST00000616010 SPP2Q13103 211 aa27.06■■□□□ 1.92
CCND3-223ENST00000616010 ZNF280CQ8ND82 737 aa27.06■■□□□ 1.92
CCND3-223ENST00000616010 WDR18Q9BV38 432 aa27.06■■□□□ 1.92
CCND3-223ENST00000616010 JMJD4Q9H9V9 463 aa27.06■■□□□ 1.92
CCND3-223ENST00000616010 MMP1P03956 469 aa27.06■■□□□ 1.92
CCND3-223ENST00000616010 DGKZQ13574 1117 aa27.06■■□□□ 1.92
CCND3-223ENST00000616010 NFKBIBQ15653 356 aa27.06■■□□□ 1.92
CCND3-223ENST00000616010 HEATR3Q7Z4Q2 680 aa27.06■■□□□ 1.92
CCND3-223ENST00000616010 ZSCAN16Q9H4T2 348 aaPredicted RBP27.06■■□□□ 1.92
CCND3-223ENST00000616010 TRIM75PA6NK02 468 aa27.05■■□□□ 1.92
CCND3-223ENST00000616010 FMR1Q06787 632 aaKnown RBP eCLIP27.05■■□□□ 1.921e-6■■■■□ 20.4
CCND3-223ENST00000616010 WWC2Q6AWC2 1192 aa27.05■■□□□ 1.92
CCND3-223ENST00000616010 ZNF408Q9H9D4 720 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms