RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 MCTP2Q6DN12 878 aa20.8■□□□□ 0.92
SPAST-203ENST00000615843 ZNF654Q8IZM8 581 aa20.8■□□□□ 0.92
SPAST-203ENST00000615843 TMEM87AQ8NBN3 555 aa20.8■□□□□ 0.92
SPAST-203ENST00000615843 FNBP1Q96RU3 617 aa20.8■□□□□ 0.92
SPAST-203ENST00000615843 RCOR1Q9UKL0 485 aa20.8■□□□□ 0.92
SPAST-203ENST00000615843 BTBD18B2RXH4 712 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 BCRP11274 1271 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 HMGB2P26583 209 aaKnown RBP20.79■□□□□ 0.92
SPAST-203ENST00000615843 PSMD6Q15008 389 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 ICE2Q659A1 982 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 SIRT1Q96EB6 747 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 SESN3P58005 492 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 LGSNQ5TDP6 509 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 ANKRD13CQ8N6S4 541 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 SETDB2Q96T68 719 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 TRIM4Q9C037 500 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 LGR6Q9HBX8 967 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 POLR3EQ9NVU0 708 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 SLFNL1Q499Z3 407 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 RNF168Q8IYW5 571 aaPredicted RBP20.79■□□□□ 0.92
SPAST-203ENST00000615843 KRT12Q99456 494 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 ABCB6Q9NP58 842 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 SH2D4BQ5SQS7 431 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 VSTM4Q8IW00 320 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 CCDC13Q8IYE1 715 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 GBP7Q8N8V2 638 aaPredicted RBP20.79■□□□□ 0.92
SPAST-203ENST00000615843 P3H4Q92791 437 aa20.79■□□□□ 0.92
SPAST-203ENST00000615843 PTPROQ16827 1216 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 TCP11Q8WWU5 503 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 RAD51AP2Q09MP3 1159 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 UHMK1Q8TAS1 419 aaKnown RBP20.78■□□□□ 0.92
SPAST-203ENST00000615843 JAG2Q9Y219 1238 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 SUN1O94901 812 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 RILPQ96NA2 401 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 ADAM21Q9UKJ8 722 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 PPP6R2O75170 966 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 GMNNO75496 209 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 RPN1P04843 607 aaKnown RBP20.78■□□□□ 0.92
SPAST-203ENST00000615843 ABCB4P21439 1286 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 STAT1P42224 750 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 USTQ9Y2C2 406 aa20.78■□□□□ 0.92
SPAST-203ENST00000615843 GYS2P54840 703 aa20.77■□□□□ 0.92
SPAST-203ENST00000615843 RASIP1Q5U651 963 aa20.77■□□□□ 0.92
SPAST-203ENST00000615843 OPHN1O60890 802 aa20.77■□□□□ 0.92
SPAST-203ENST00000615843 SMIM24O75264 130 aa20.77■□□□□ 0.92
SPAST-203ENST00000615843 MMS22LQ6ZRQ5 1243 aa20.77■□□□□ 0.92
SPAST-203ENST00000615843 INTS9Q9NV88 658 aaKnown RBP20.77■□□□□ 0.92
SPAST-203ENST00000615843 TAF5LO75529 589 aa20.77■□□□□ 0.92
SPAST-203ENST00000615843 CHMP2AO43633 222 aa20.77■□□□□ 0.91
SPAST-203ENST00000615843 ADCY7P51828 1080 aa20.77■□□□□ 0.91
SPAST-203ENST00000615843 EHHADHQ08426 723 aa20.77■□□□□ 0.91
SPAST-203ENST00000615843 NCAPH2Q6IBW4 605 aa20.77■□□□□ 0.91
SPAST-203ENST00000615843 ZNF354CQ86Y25 554 aa20.77■□□□□ 0.91
SPAST-203ENST00000615843 NSUN7Q8NE18 718 aaKnown RBP20.77■□□□□ 0.91
SPAST-203ENST00000615843 TNRQ92752 1358 aa20.77■□□□□ 0.91
SPAST-203ENST00000615843 ARID5BQ14865 1188 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 CMTR1Q8N1G2 835 aaKnown RBP20.76■□□□□ 0.91
SPAST-203ENST00000615843 FTOQ9C0B1 505 aaKnown RBP eCLIP20.76■□□□□ 0.91
SPAST-203ENST00000615843 SAP30BPQ9UHR5 308 aaKnown RBP20.76■□□□□ 0.91
SPAST-203ENST00000615843 DNM3Q9UQ16 869 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 SOWAHDA6NJG2 315 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 EXOC3O60645 756 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 HEXIM1O94992 359 aaKnown RBP20.76■□□□□ 0.91
SPAST-203ENST00000615843 EIF4A1P60842 406 aaKnown RBP20.76■□□□□ 0.91
SPAST-203ENST00000615843 ARHGAP44Q17R89 818 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 GSDMAQ96QA5 445 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 UHRF1BP1LA0JNW5 1464 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 MYOCDQ8IZQ8 938 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 ACRBPQ8NEB7 543 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 EPB41L5Q9HCM4 733 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 RFC4P35249 363 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 SYMPKQ92797 1274 aaKnown RBP20.76■□□□□ 0.91
SPAST-203ENST00000615843 N4BP2L2Q92802 583 aaPredicted RBP20.76■□□□□ 0.91
SPAST-203ENST00000615843 ANKRD2Q9GZV1 360 aa20.76■□□□□ 0.91
SPAST-203ENST00000615843 IRX4P78413 519 aa20.75■□□□□ 0.91
SPAST-203ENST00000615843 MAGI2Q86UL8 1455 aa20.75■□□□□ 0.91
SPAST-203ENST00000615843 CARMIL3Q8ND23 1372 aa20.75■□□□□ 0.91
SPAST-203ENST00000615843 GCNT3O95395 438 aa20.75■□□□□ 0.91
SPAST-203ENST00000615843 IFNAR2P48551 515 aa20.75■□□□□ 0.91
SPAST-203ENST00000615843 NNTQ13423 1086 aa20.75■□□□□ 0.91
SPAST-203ENST00000615843 HAUS7Q99871 368 aa20.75■□□□□ 0.91
SPAST-203ENST00000615843 C19orf44Q9H6X5 657 aa20.75■□□□□ 0.91
SPAST-203ENST00000615843 ACTR5Q9H9F9 607 aaPredicted RBP20.75■□□□□ 0.91
SPAST-203ENST00000615843 BAG2O95816 211 aa20.75■□□□□ 0.91
SPAST-203ENST00000615843 WDR62O43379 1518 aa20.75■□□□□ 0.91
SPAST-203ENST00000615843 POLR2FP61218 127 aaKnown RBP20.75■□□□□ 0.91
SPAST-203ENST00000615843 SARM1Q6SZW1 724 aa20.75■□□□□ 0.91
SPAST-203ENST00000615843 RASSF7Q02833 373 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 C2orf54Q08AI8 447 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 PDE1CQ14123 709 aaPredicted RBP20.74■□□□□ 0.91
SPAST-203ENST00000615843 KMT5BQ4FZB7 885 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 TADA2BQ86TJ2 420 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 LINC00301Q8NCQ3 95 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 LPIN2Q92539 896 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 GLT8D2Q9H1C3 349 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 MRPL44Q9H9J2 332 aaKnown RBP20.74■□□□□ 0.91
SPAST-203ENST00000615843 TRPM2O94759 1503 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 ARHGAP42A6NI28 874 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 XRCC5P13010 732 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms