RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 UBXN6Q9BZV1 441 aa14.91□□□□□ -0.02
FOXN3-219ENST00000615335 OSBPL5Q9H0X9 879 aaPredicted RBP14.91□□□□□ -0.02
FOXN3-219ENST00000615335 RNF41Q9H4P4 317 aaPredicted RBP14.91□□□□□ -0.02
FOXN3-219ENST00000615335 VEZTQ9HBM0 779 aa14.91□□□□□ -0.02
FOXN3-219ENST00000615335 KCND1Q9NSA2 647 aa14.91□□□□□ -0.02
FOXN3-219ENST00000615335 GPRC5DQ9NZD1 345 aa14.91□□□□□ -0.02
FOXN3-219ENST00000615335 ZNF70Q9UC06 446 aaPredicted RBP14.91□□□□□ -0.02
FOXN3-219ENST00000615335 CDC25BP30305 580 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 RRP12Q5JTH9 1297 aaKnown RBP14.9□□□□□ -0.02
FOXN3-219ENST00000615335 NSUN7Q8NE18 718 aaKnown RBP14.9□□□□□ -0.02
FOXN3-219ENST00000615335 STAG1Q8WVM7 1258 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 LAMB1P07942 1786 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 TCP10L2B9ZVM9 353 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 ZNF165P49910 485 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 APOBRQ0VD83 1088 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 NBPF20Q3BBV1 942 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 CHST3Q7LGC8 479 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 PLA2G4DQ86XP0 818 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 TRIM5Q9C035 493 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 CNNM2Q9H8M5 875 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 FAM198AQ9UFP1 575 aa14.9□□□□□ -0.02
FOXN3-219ENST00000615335 NEDD4P46934 1319 aa14.89□□□□□ -0.03
FOXN3-219ENST00000615335 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
FOXN3-219ENST00000615335 TUBB4AP04350 444 aa14.89□□□□□ -0.03
FOXN3-219ENST00000615335 LMOD1P29536 600 aaPredicted RBP14.89□□□□□ -0.03
FOXN3-219ENST00000615335 EPS15P42566 896 aa14.89□□□□□ -0.03
FOXN3-219ENST00000615335 ZNF75DP51815 510 aa14.89□□□□□ -0.03
FOXN3-219ENST00000615335 EXOSC10Q01780 885 aaKnown RBP14.89□□□□□ -0.03
FOXN3-219ENST00000615335 KIF4BQ2VIQ3 1234 aa14.89□□□□□ -0.03
FOXN3-219ENST00000615335 SPDYE2Q495Y8 402 aa14.89□□□□□ -0.03
FOXN3-219ENST00000615335 ZSCAN29Q8IWY8 852 aaPredicted RBP14.89□□□□□ -0.03
FOXN3-219ENST00000615335 ZFPM1Q8IX07 1006 aa14.89□□□□□ -0.03
FOXN3-219ENST00000615335 HOMEZQ8IX15 550 aa14.89□□□□□ -0.03
FOXN3-219ENST00000615335 ZBED3Q96IU2 234 aaPredicted RBP14.89□□□□□ -0.03
FOXN3-219ENST00000615335 DNAJC25Q9H1X3 360 aa14.89□□□□□ -0.03
FOXN3-219ENST00000615335 TACC3Q9Y6A5 838 aa14.89□□□□□ -0.03
FOXN3-219ENST00000615335 PTPDC1A2A3K4 754 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 B4E1Z4 1266 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 POLR3GO15318 223 aaPredicted RBP14.88□□□□□ -0.03
FOXN3-219ENST00000615335 PRDM1O75626 825 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 CAVIN2O95810 425 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 FOSBP53539 338 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 CEBPZQ03701 1054 aaKnown RBP14.88□□□□□ -0.03
FOXN3-219ENST00000615335 PDE4BQ07343 736 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 MCTP2Q6DN12 878 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 DYNLL2Q96FJ2 89 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 CEP89Q96ST8 783 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 KRT23Q9C075 422 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 L2HGDHQ9H9P8 463 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 CTDNEP1O95476 244 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 ADD1P35611 737 aaKnown RBP14.88□□□□□ -0.03
FOXN3-219ENST00000615335 AGXT2Q9BYV1 514 aa14.88□□□□□ -0.03
FOXN3-219ENST00000615335 ZC3H4Q9UPT8 1303 aaKnown RBP14.87□□□□□ -0.03
FOXN3-219ENST00000615335 NPM3O75607 178 aaKnown RBP14.87□□□□□ -0.03
FOXN3-219ENST00000615335 TPM1P09493 284 aa14.87□□□□□ -0.03
FOXN3-219ENST00000615335 ACTN2P35609 894 aa14.87□□□□□ -0.03
FOXN3-219ENST00000615335 EP400NLQ6ZTU2 488 aa14.87□□□□□ -0.03
FOXN3-219ENST00000615335 PACS2Q86VP3 889 aa14.87□□□□□ -0.03
FOXN3-219ENST00000615335 RCOR1Q9UKL0 485 aa14.87□□□□□ -0.03
FOXN3-219ENST00000615335 MYH15Q9Y2K3 1946 aa14.87□□□□□ -0.03
FOXN3-219ENST00000615335 DDX60LQ5H9U9 1706 aaKnown RBP14.87□□□□□ -0.03
FOXN3-219ENST00000615335 CTAGE5O15320 804 aa14.87□□□□□ -0.03
FOXN3-219ENST00000615335 ENTPD3O75355 529 aa14.87□□□□□ -0.03
FOXN3-219ENST00000615335 HLA-DOAP06340 250 aa14.87□□□□□ -0.03
FOXN3-219ENST00000615335 CCT2P78371 535 aaKnown RBP14.87□□□□□ -0.03
FOXN3-219ENST00000615335 CCAR1Q8IX12 1150 aaKnown RBP14.87□□□□□ -0.03
FOXN3-219ENST00000615335 MB21D2Q8IYB1 491 aaPredicted RBP14.87□□□□□ -0.03
FOXN3-219ENST00000615335 NKX2-3Q8TAU0 364 aa14.87□□□□□ -0.03
FOXN3-219ENST00000615335 ZNF396Q96N95 335 aaPredicted RBP14.87□□□□□ -0.03
FOXN3-219ENST00000615335 DHX36Q9H2U1 1008 aaKnown RBP14.87□□□□□ -0.03
FOXN3-219ENST00000615335 MKNK2Q9HBH9 465 aa14.87□□□□□ -0.03
FOXN3-219ENST00000615335 RANBP6O60518 1105 aaKnown RBP14.86□□□□□ -0.03
FOXN3-219ENST00000615335 PCP11498 1178 aaKnown RBP14.86□□□□□ -0.03
FOXN3-219ENST00000615335 ATL3Q6DD88 541 aa14.86□□□□□ -0.03
FOXN3-219ENST00000615335 LEKR1Q6ZMV7 388 aa14.86□□□□□ -0.03
FOXN3-219ENST00000615335 TRPM4Q8TD43 1214 aa14.86□□□□□ -0.03
FOXN3-219ENST00000615335 ESR2Q92731 530 aa14.86□□□□□ -0.03
FOXN3-219ENST00000615335 ZSWIM5Q9P217 1185 aa14.86□□□□□ -0.03
FOXN3-219ENST00000615335 SUFUQ9UMX1 484 aa14.86□□□□□ -0.03
FOXN3-219ENST00000615335 CCDC196A0A1B0GTZ2 297 aa14.86□□□□□ -0.03
FOXN3-219ENST00000615335 GLTPD2A6NH11 291 aa14.86□□□□□ -0.03
FOXN3-219ENST00000615335 DDTLA6NHG4 134 aaPredicted RBP14.86□□□□□ -0.03
FOXN3-219ENST00000615335 PRC1O43663 620 aa14.86□□□□□ -0.03
FOXN3-219ENST00000615335 CACTINQ8WUQ7 758 aaKnown RBP14.86□□□□□ -0.03
FOXN3-219ENST00000615335 ZNF287Q9HBT7 754 aa14.86□□□□□ -0.03
FOXN3-219ENST00000615335 SCAF8Q9UPN6 1271 aaKnown RBP14.86□□□□□ -0.03
FOXN3-219ENST00000615335 ASTN2O75129 1339 aaPredicted RBP14.85□□□□□ -0.03
FOXN3-219ENST00000615335 FGRP09769 529 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 FKBP1CQ5VVH2 108 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 CCDC73Q6ZRK6 1079 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 CYB5R4Q7L1T6 521 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 SLC44A5Q8NCS7 719 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 FAM151AQ8WW52 585 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 ZNF274Q96GC6 653 aaPredicted RBP14.85□□□□□ -0.03
FOXN3-219ENST00000615335 NCOA5Q9HCD5 579 aaKnown RBP14.85□□□□□ -0.03
FOXN3-219ENST00000615335 PI4KBQ9UBF8 816 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 CLIP2Q9UDT6 1046 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 NRBP1Q9UHY1 535 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 SERPINB13Q9UIV8 391 aa14.85□□□□□ -0.03
FOXN3-219ENST00000615335 HACL1Q9UJ83 578 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms