RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 LONRF3Q496Y0 759 aa21.89■■□□□ 1.09
MMP28-204ENST00000615136 AOPEPQ8N6M6 819 aa21.89■■□□□ 1.09
MMP28-204ENST00000615136 ZDHHC15Q96MV8 337 aa21.89■■□□□ 1.09
MMP28-204ENST00000615136 TRIM75PA6NK02 468 aa21.88■■□□□ 1.09
MMP28-204ENST00000615136 KLRF2D3W0D1 207 aa21.88■■□□□ 1.09
MMP28-204ENST00000615136 BIN1O00499 593 aa21.88■■□□□ 1.09
MMP28-204ENST00000615136 SHMT1P34896 483 aa21.88■■□□□ 1.09
MMP28-204ENST00000615136 LRMPQ12912 555 aa21.88■■□□□ 1.09
MMP28-204ENST00000615136 HSP90AA2PQ14568 343 aaPredicted RBP21.88■■□□□ 1.09
MMP28-204ENST00000615136 CCDC144BQ3MJ40 725 aa21.88■■□□□ 1.09
MMP28-204ENST00000615136 WWC2Q6AWC2 1192 aa21.88■■□□□ 1.09
MMP28-204ENST00000615136 SERPINB13Q9UIV8 391 aa21.88■■□□□ 1.09
MMP28-204ENST00000615136 KCNH3Q9ULD8 1083 aa21.88■■□□□ 1.09
MMP28-204ENST00000615136 C10orf71Q711Q0 1435 aa21.88■■□□□ 1.09
MMP28-204ENST00000615136 ZNF174Q15697 407 aa21.87■■□□□ 1.09
MMP28-204ENST00000615136 DPCR1Q3MIW9 517 aa21.87■■□□□ 1.09
MMP28-204ENST00000615136 PIK3AP1Q6ZUJ8 805 aa21.87■■□□□ 1.09
MMP28-204ENST00000615136 RASGRP4Q8TDF6 673 aa21.87■■□□□ 1.09
MMP28-204ENST00000615136 BRMS1Q9HCU9 246 aa21.87■■□□□ 1.09
MMP28-204ENST00000615136 SRPRBQ9Y5M8 271 aaKnown RBP21.87■■□□□ 1.09
MMP28-204ENST00000615136 SIPA1L1O43166 1804 aa21.87■■□□□ 1.09
MMP28-204ENST00000615136 USP17L5A8MUK1 530 aa21.87■■□□□ 1.09
MMP28-204ENST00000615136 FOXN1O15353 648 aa21.87■■□□□ 1.09
MMP28-204ENST00000615136 TOP1P11387 765 aaKnown RBP21.87■■□□□ 1.09
MMP28-204ENST00000615136 GTF2F1P35269 517 aaKnown RBP eCLIP21.87■■□□□ 1.09
MMP28-204ENST00000615136 TCP10Q12799 353 aa21.87■■□□□ 1.09
MMP28-204ENST00000615136 CSRNP2Q9H175 543 aa21.87■■□□□ 1.09
MMP28-204ENST00000615136 MTMR4Q9NYA4 1195 aa21.87■■□□□ 1.09
MMP28-204ENST00000615136 PLIN4Q96Q06 1357 aa21.86■■□□□ 1.09
MMP28-204ENST00000615136 IGKV6D-41A0A0C4DH26 115 aa21.86■■□□□ 1.09
MMP28-204ENST00000615136 FAM196BA6NMK8 535 aa21.86■■□□□ 1.09
MMP28-204ENST00000615136 GNAQP50148 359 aa21.86■■□□□ 1.09
MMP28-204ENST00000615136 RBM5P52756 815 aaKnown RBP eCLIP21.86■■□□□ 1.09
MMP28-204ENST00000615136 NLRP12P59046 1061 aa21.86■■□□□ 1.09
MMP28-204ENST00000615136 PNOCQ13519 176 aa21.86■■□□□ 1.09
MMP28-204ENST00000615136 ISM2Q6H9L7 571 aa21.86■■□□□ 1.09
MMP28-204ENST00000615136 METTL16Q86W50 562 aaKnown RBP21.86■■□□□ 1.09
MMP28-204ENST00000615136 LRRC47Q8N1G4 583 aaKnown RBP21.86■■□□□ 1.09
MMP28-204ENST00000615136 CACTINQ8WUQ7 758 aaKnown RBP21.86■■□□□ 1.09
MMP28-204ENST00000615136 DNAJC18Q9H819 358 aa21.86■■□□□ 1.09
MMP28-204ENST00000615136 BAG6P46379 1132 aa21.85■■□□□ 1.09
MMP28-204ENST00000615136 ZRSR1Q15695 479 aaKnown RBP21.85■■□□□ 1.09
MMP28-204ENST00000615136 SHROOM1Q2M3G4 852 aaPredicted RBP21.85■■□□□ 1.09
MMP28-204ENST00000615136 FAM198AQ9UFP1 575 aa21.85■■□□□ 1.09
MMP28-204ENST00000615136 PPIP5K2O43314 1243 aa21.85■■□□□ 1.09
MMP28-204ENST00000615136 PARP1P09874 1014 aaKnown RBP21.85■■□□□ 1.09
MMP28-204ENST00000615136 KCNA3P22001 575 aa21.85■■□□□ 1.09
MMP28-204ENST00000615136 FKBP1AP62942 108 aaKnown RBP21.85■■□□□ 1.09
MMP28-204ENST00000615136 TTC38Q5R3I4 469 aa21.85■■□□□ 1.09
MMP28-204ENST00000615136 KRBA2Q6ZNG9 492 aa21.85■■□□□ 1.09
MMP28-204ENST00000615136 SH3BP5LQ7L8J4 393 aa21.85■■□□□ 1.09
MMP28-204ENST00000615136 HEATR3Q7Z4Q2 680 aa21.85■■□□□ 1.09
MMP28-204ENST00000615136 DDTLA6NHG4 134 aaPredicted RBP21.84■■□□□ 1.09
MMP28-204ENST00000615136 STXBP3O00186 592 aa21.84■■□□□ 1.09
MMP28-204ENST00000615136 NEMFO60524 1076 aa21.84■■□□□ 1.09
MMP28-204ENST00000615136 FOXP4Q8IVH2 680 aaPredicted RBP21.84■■□□□ 1.09
MMP28-204ENST00000615136 BLIDQ8IZY5 108 aa21.84■■□□□ 1.09
MMP28-204ENST00000615136 UBA5Q9GZZ9 404 aa21.84■■□□□ 1.09
MMP28-204ENST00000615136 TUBE1Q9UJT0 475 aa21.84■■□□□ 1.09
MMP28-204ENST00000615136 CEP131Q9UPN4 1083 aa21.84■■□□□ 1.09
MMP28-204ENST00000615136 M0R2N6 131 aa21.84■■□□□ 1.09
MMP28-204ENST00000615136 COL4A5P29400 1685 aa21.84■■□□□ 1.09
MMP28-204ENST00000615136 FRMPD2Q68DX3 1309 aaPredicted RBP21.84■■□□□ 1.09
MMP28-204ENST00000615136 SPZ1Q9BXG8 430 aa21.84■■□□□ 1.09
MMP28-204ENST00000615136 SH3GLB2Q9NR46 395 aa21.84■■□□□ 1.09
MMP28-204ENST00000615136 PCDHA4Q9UN74 947 aa21.84■■□□□ 1.09
MMP28-204ENST00000615136 PDHBP11177 359 aa21.83■■□□□ 1.09
MMP28-204ENST00000615136 DPEP1P16444 411 aa21.83■■□□□ 1.09
MMP28-204ENST00000615136 HOMER1Q86YM7 354 aa21.83■■□□□ 1.09
MMP28-204ENST00000615136 LRRC8AQ8IWT6 810 aa21.83■■□□□ 1.09
MMP28-204ENST00000615136 PDILTQ8N807 584 aa21.83■■□□□ 1.09
MMP28-204ENST00000615136 ZNF579Q8NAF0 562 aaKnown RBP21.83■■□□□ 1.09
MMP28-204ENST00000615136 MRIQ9BWK5 157 aa21.83■■□□□ 1.09
MMP28-204ENST00000615136 VAT1LQ9HCJ6 419 aa21.83■■□□□ 1.09
MMP28-204ENST00000615136 BARHL2Q9NY43 387 aa21.83■■□□□ 1.09
MMP28-204ENST00000615136 A0A087X0B3 334 aa21.82■■□□□ 1.08
MMP28-204ENST00000615136 POLR2DO15514 142 aaKnown RBP21.82■■□□□ 1.08
MMP28-204ENST00000615136 EPSTI1Q96J88 318 aa21.82■■□□□ 1.08
MMP28-204ENST00000615136 MDM2Q00987 491 aaPredicted RBP21.82■■□□□ 1.08
MMP28-204ENST00000615136 PTGDRQ13258 359 aa21.82■■□□□ 1.08
MMP28-204ENST00000615136 TTLL6Q8N841 843 aa21.82■■□□□ 1.08
MMP28-204ENST00000615136 CNNM3Q8NE01 707 aa21.82■■□□□ 1.08
MMP28-204ENST00000615136 SWAP70Q9UH65 585 aa21.82■■□□□ 1.08
MMP28-204ENST00000615136 SERTAD1Q9UHV2 236 aa21.82■■□□□ 1.08
MMP28-204ENST00000615136 GREB1LQ9C091 1923 aaPredicted RBP21.81■■□□□ 1.08
MMP28-204ENST00000615136 HLA-DOAP06340 250 aa21.81■■□□□ 1.08
MMP28-204ENST00000615136 HDLBPQ00341 1268 aaKnown RBP21.81■■□□□ 1.08
MMP28-204ENST00000615136 GRAMD1CQ8IYS0 662 aa21.81■■□□□ 1.08
MMP28-204ENST00000615136 PIGSQ96S52 555 aa21.81■■□□□ 1.08
MMP28-204ENST00000615136 LZTS2Q9BRK4 669 aa21.81■■□□□ 1.08
MMP28-204ENST00000615136 TDRD3Q9H7E2 651 aaKnown RBP21.81■■□□□ 1.08
MMP28-204ENST00000615136 FAM13BQ9NYF5 915 aa21.81■■□□□ 1.08
MMP28-204ENST00000615136 PCDHA6Q9UN73 950 aa21.81■■□□□ 1.08
MMP28-204ENST00000615136 PCDHA8Q9Y5H6 950 aa21.81■■□□□ 1.08
MMP28-204ENST00000615136 PRR29P0C7W0 189 aa21.8■■□□□ 1.08
MMP28-204ENST00000615136 CALML3P27482 149 aa21.8■■□□□ 1.08
MMP28-204ENST00000615136 MCM7P33993 719 aa21.8■■□□□ 1.08
MMP28-204ENST00000615136 NCAPHQ15003 741 aa21.8■■□□□ 1.08
MMP28-204ENST00000615136 IL17AQ16552 155 aa21.8■■□□□ 1.08
MMP28-204ENST00000615136 CC2D2BQ6DHV5 1058 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms