RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 FAM110CQ1W6H9 321 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 SLC9C1Q4G0N8 1177 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 TMEM63BQ5T3F8 832 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 GIMAP6Q6P9H5 292 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 CENPQQ7L2Z9 268 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-208ENST00000614678 GPR142Q7Z601 462 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 NEDD1Q8NHV4 660 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 NACAP1Q9BZK3 213 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 KANSL2Q9H9L4 492 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 MCM3APO60318 1980 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 ZNFX1Q9P2E3 1918 aaKnown RBP6.76□□□□□ -1.33
CPNE3-208ENST00000614678 USP17L15C9J2P7 530 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 USP17L13C9JLJ4 530 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 USP17L11C9JVI0 530 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 USP17L18D6R9N7 530 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 USP17L22D6RA61 530 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 USP17L17D6RBQ6 530 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 USP17L19D6RCP7 530 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 USP17L20D6RJB6 530 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 COBLO75128 1261 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 PPFIA3O75145 1194 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 ERCC3P19447 782 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 USP17L24Q0WX57 530 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 SLC35G1Q2M3R5 365 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 CERS3Q8IU89 383 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 ZNF333Q96JL9 665 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 AGBL1Q96MI9 1066 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 TMEM47Q9BQJ4 181 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 MYL10Q9BUA6 226 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 UBA5Q9GZZ9 404 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 RAVER2Q9HCJ3 691 aaKnown RBP6.76□□□□□ -1.33
CPNE3-208ENST00000614678 RXRAP19793 462 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 NOM1Q5C9Z4 860 aaKnown RBP6.76□□□□□ -1.33
CPNE3-208ENST00000614678 LBX2Q6XYB7 198 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 RASEFQ8IZ41 740 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 REPS2Q8NFH8 660 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 RAET1EQ8TD07 263 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 SHISA4Q96DD7 197 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 LSG1Q9H089 658 aaKnown RBP6.76□□□□□ -1.33
CPNE3-208ENST00000614678 GPCPD1Q9NPB8 672 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 REV3LO60673 3130 aa6.76□□□□□ -1.33
CPNE3-208ENST00000614678 TMEM232C9JQI7 657 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 DSG3P32926 999 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 CYP2C19P33261 490 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 COG2Q14746 738 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 ADCK5Q3MIX3 580 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 AKNAD1Q5T1N1 836 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 CMTR1Q8N1G2 835 aaKnown RBP6.75□□□□□ -1.33
CPNE3-208ENST00000614678 GPRC5AQ8NFJ5 357 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 DIS3LQ8TF46 1054 aaKnown RBP6.75□□□□□ -1.33
CPNE3-208ENST00000614678 ZNF214Q9UL59 606 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-208ENST00000614678 VWA5AO00534 786 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 ADCY3O60266 1144 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 FGRP09769 529 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 CCND3P30281 292 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-208ENST00000614678 ANTXR2P58335 489 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 NBPF11Q86T75 865 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 AMOTL1Q8IY63 956 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 STAG2Q8N3U4 1231 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 LARP6Q9BRS8 491 aaKnown RBP6.75□□□□□ -1.33
CPNE3-208ENST00000614678 ARHGEF10LQ9HCE6 1279 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 BIN2Q9UBW5 565 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-208ENST00000614678 ANAPC4Q9UJX5 808 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 ZNF213O14771 459 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 TTLL1O95922 423 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 GRK4P32298 578 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 FCGRTP55899 365 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 PDE4BQ07343 736 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 ALX1Q15699 326 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 SLFN13Q68D06 897 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 CCDC174Q6PII3 467 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 NCAPG2Q86XI2 1143 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 PIBF1Q8WXW3 757 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 CCDC17Q96LX7 622 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 MORF4L1Q9UBU8 362 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 RBM8AQ9Y5S9 174 aaKnown RBP6.75□□□□□ -1.33
CPNE3-208ENST00000614678 TRIOBPQ9H2D6 2365 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 ZNF536O15090 1300 aa6.75□□□□□ -1.33
CPNE3-208ENST00000614678 INHAP05111 366 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 MFSD6Q6ZSS7 791 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 ENAHQ8N8S7 591 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-208ENST00000614678 ESYT1Q9BSJ8 1104 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 SPATC1LQ9H0A9 340 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 SLC45A1Q9Y2W3 748 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 MUC3AQ02505 3323 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 ASTN1O14525 1302 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 TRPV1Q8NER1 839 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 STAG1Q8WVM7 1258 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 TBC1D5Q92609 795 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 ANO2Q9NQ90 1003 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 NYAP2Q9P242 653 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 LAMA4Q16363 1823 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 IGSF3O75054 1194 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 SEC24BO95487 1268 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 USP14P54578 494 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 MUM1L1Q5H9M0 696 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 ZFP91Q96JP5 570 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-208ENST00000614678 RNF208Q9H0X6 261 aa6.74□□□□□ -1.33
CPNE3-208ENST00000614678 ZCCHC17Q9NP64 241 aaKnown RBP6.74□□□□□ -1.33
CPNE3-208ENST00000614678 PNMA3Q9UL41 463 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms