RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
SRRT-215ENST00000614484 KRT26Q7Z3Y9 468 aa13.72□□□□□ -0.21
SRRT-215ENST00000614484 KCNF1Q9H3M0 494 aa13.72□□□□□ -0.21
SRRT-215ENST00000614484 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
SRRT-215ENST00000614484 ZSWIM5Q9P217 1185 aa13.72□□□□□ -0.21
SRRT-215ENST00000614484 MKRN1Q9UHC7 482 aaKnown RBP13.72□□□□□ -0.21
SRRT-215ENST00000614484 DOCK2Q92608 1830 aa13.72□□□□□ -0.21
SRRT-215ENST00000614484 ZNF280AP59817 542 aaPredicted RBP13.72□□□□□ -0.21
SRRT-215ENST00000614484 C12orf60Q5U649 245 aa13.72□□□□□ -0.21
SRRT-215ENST00000614484 ADARB2Q9NS39 739 aaKnown RBP13.72□□□□□ -0.21
SRRT-215ENST00000614484 RFX7Q2KHR2 1363 aa13.72□□□□□ -0.21
SRRT-215ENST00000614484 TPD52L2O43399 206 aaKnown RBP13.71□□□□□ -0.21
SRRT-215ENST00000614484 ZYXQ15942 572 aaKnown RBP13.71□□□□□ -0.21
SRRT-215ENST00000614484 MFSD4BQ5TF39 518 aa13.71□□□□□ -0.21
SRRT-215ENST00000614484 BLOC1S2Q6QNY1 142 aa13.71□□□□□ -0.21
SRRT-215ENST00000614484 CCDC82Q8N4S0 544 aa13.71□□□□□ -0.21
SRRT-215ENST00000614484 MTA3Q9BTC8 594 aa13.71□□□□□ -0.21
SRRT-215ENST00000614484 TSPY2A6NKD2 308 aa13.71□□□□□ -0.21
SRRT-215ENST00000614484 FKBP1AP62942 108 aaKnown RBP13.71□□□□□ -0.21
SRRT-215ENST00000614484 TTLL12Q14166 644 aaPredicted RBP13.71□□□□□ -0.21
SRRT-215ENST00000614484 AKNAD1Q5T1N1 836 aa13.71□□□□□ -0.21
SRRT-215ENST00000614484 AMOTL1Q8IY63 956 aa13.71□□□□□ -0.21
SRRT-215ENST00000614484 C10orf67Q8IYJ2 551 aa13.71□□□□□ -0.21
SRRT-215ENST00000614484 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
SRRT-215ENST00000614484 STX8Q9UNK0 236 aa13.71□□□□□ -0.21
SRRT-215ENST00000614484 CNTNAP1P78357 1384 aa13.71□□□□□ -0.22
SRRT-215ENST00000614484 PAX3P23760 479 aa13.71□□□□□ -0.22
SRRT-215ENST00000614484 JAG1P78504 1218 aa13.71□□□□□ -0.22
SRRT-215ENST00000614484 TFAP4Q01664 338 aa13.71□□□□□ -0.22
SRRT-215ENST00000614484 DGKZQ13574 1117 aa13.71□□□□□ -0.22
SRRT-215ENST00000614484 RRP1BQ14684 758 aaKnown RBP13.71□□□□□ -0.22
SRRT-215ENST00000614484 SYCP1Q15431 976 aa13.71□□□□□ -0.22
SRRT-215ENST00000614484 NECAB1Q8N987 351 aa13.71□□□□□ -0.22
SRRT-215ENST00000614484 ANKRD20A12PQ8NF67 263 aa13.71□□□□□ -0.22
SRRT-215ENST00000614484 BRF1Q92994 677 aa13.71□□□□□ -0.22
SRRT-215ENST00000614484 MORC2Q9Y6X9 1032 aaPredicted RBP13.71□□□□□ -0.22
SRRT-215ENST00000614484 CDK8P49336 464 aa13.7□□□□□ -0.22
SRRT-215ENST00000614484 MKRN3Q13064 507 aaKnown RBP13.7□□□□□ -0.22
SRRT-215ENST00000614484 GRM1Q13255 1194 aa13.7□□□□□ -0.22
SRRT-215ENST00000614484 TSGA10IPQ3SY00 556 aa13.7□□□□□ -0.22
SRRT-215ENST00000614484 Q6ZUG5 572 aa13.7□□□□□ -0.22
SRRT-215ENST00000614484 CMTR1Q8N1G2 835 aaKnown RBP13.7□□□□□ -0.22
SRRT-215ENST00000614484 DCPSQ96C86 337 aaKnown RBP13.7□□□□□ -0.22
SRRT-215ENST00000614484 SERPINB13Q9UIV8 391 aa13.7□□□□□ -0.22
SRRT-215ENST00000614484 MYO1CO00159 1063 aa13.7□□□□□ -0.22
SRRT-215ENST00000614484 APOBRQ0VD83 1088 aa13.7□□□□□ -0.22
SRRT-215ENST00000614484 SULF1Q8IWU6 871 aa13.7□□□□□ -0.22
SRRT-215ENST00000614484 KRT222Q8N1A0 295 aa13.7□□□□□ -0.22
SRRT-215ENST00000614484 ZKSCAN4Q969J2 545 aaPredicted RBP13.7□□□□□ -0.22
SRRT-215ENST00000614484 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
SRRT-215ENST00000614484 PDRG1Q9NUG6 133 aa13.7□□□□□ -0.22
SRRT-215ENST00000614484 TIAM2Q8IVF5 1701 aa13.69□□□□□ -0.22
SRRT-215ENST00000614484 SMTNL1A8MU46 457 aa13.69□□□□□ -0.22
SRRT-215ENST00000614484 PRC1O43663 620 aa13.69□□□□□ -0.22
SRRT-215ENST00000614484 AKR1B1P15121 316 aa13.69□□□□□ -0.22
SRRT-215ENST00000614484 MCM2P49736 904 aa13.69□□□□□ -0.22
SRRT-215ENST00000614484 AK2P54819 239 aa13.69□□□□□ -0.22
SRRT-215ENST00000614484 HDLBPQ00341 1268 aaKnown RBP13.69□□□□□ -0.22
SRRT-215ENST00000614484 ARPP21Q9UBL0 812 aaPredicted RBP13.69□□□□□ -0.22
SRRT-215ENST00000614484 HLA-DOAP06340 250 aa13.69□□□□□ -0.22
SRRT-215ENST00000614484 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
SRRT-215ENST00000614484 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
SRRT-215ENST00000614484 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
SRRT-215ENST00000614484 GPBP1L1Q9HC44 474 aaPredicted RBP13.69□□□□□ -0.22
SRRT-215ENST00000614484 CYP46A1Q9Y6A2 500 aa13.69□□□□□ -0.22
SRRT-215ENST00000614484 LARGE1O95461 756 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 SKILP12757 684 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 CYP2C19P33261 490 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 FOSBP53539 338 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 NAP1L1P55209 391 aaKnown RBP13.68□□□□□ -0.22
SRRT-215ENST00000614484 ANTXR2P58335 489 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 FOXD4Q12950 439 aaPredicted RBP13.68□□□□□ -0.22
SRRT-215ENST00000614484 NAA30Q147X3 362 aaPredicted RBP13.68□□□□□ -0.22
SRRT-215ENST00000614484 APBB1IPQ7Z5R6 666 aaPredicted RBP13.68□□□□□ -0.22
SRRT-215ENST00000614484 KIF18AQ8NI77 898 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 C16orf45Q96MC5 204 aaPredicted RBP13.68□□□□□ -0.22
SRRT-215ENST00000614484 RANBP17Q9H2T7 1088 aaKnown RBP13.68□□□□□ -0.22
SRRT-215ENST00000614484 VEGFAP15692 232 aaPredicted RBP13.68□□□□□ -0.22
SRRT-215ENST00000614484 NFXL1Q6ZNB6 911 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 NCOA7Q8NI08 942 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 NCOA5Q9HCD5 579 aaKnown RBP13.68□□□□□ -0.22
SRRT-215ENST00000614484 TCHHQ07283 1943 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 POLR2AP24928 1970 aaKnown RBP13.68□□□□□ -0.22
SRRT-215ENST00000614484 IFIT3O14879 490 aaKnown RBP13.68□□□□□ -0.22
SRRT-215ENST00000614484 INPP5BP32019 993 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 MUM1L1Q5H9M0 696 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 RUFY3Q7L099 469 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 TTC6Q86TZ1 520 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 CCDC112Q8NEF3 446 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 NUP133Q8WUM0 1156 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 IDI2Q9BXS1 227 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 ETAA1Q9NY74 926 aa13.68□□□□□ -0.22
SRRT-215ENST00000614484 CCP110O43303 1012 aa13.67□□□□□ -0.22
SRRT-215ENST00000614484 FAM163BP0C2L3 166 aa13.67□□□□□ -0.22
SRRT-215ENST00000614484 PDE4BQ07343 736 aa13.67□□□□□ -0.22
SRRT-215ENST00000614484 ZBED3Q96IU2 234 aaPredicted RBP13.67□□□□□ -0.22
SRRT-215ENST00000614484 PI4KBQ9UBF8 816 aa13.67□□□□□ -0.22
SRRT-215ENST00000614484 ZNF232Q9UNY5 417 aa13.67□□□□□ -0.22
SRRT-215ENST00000614484 WDR33Q9C0J8 1336 aaKnown RBP13.67□□□□□ -0.22
SRRT-215ENST00000614484 PES1O00541 588 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms