RNA–Protein interactions for RNA: ENST00000613942.2

CRNDE-212, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 2,601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-212ENST00000613942 TSPY3P0CV98 308 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 TSPY8P0CW00 308 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 HDLBPQ00341 1268 aaKnown RBP6.93□□□□□ -1.3
CRNDE-212ENST00000613942 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.93□□□□□ -1.3
CRNDE-212ENST00000613942 SYNE3Q6ZMZ3 975 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 SH3BP5LQ7L8J4 393 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 ZNF444Q8N0Y2 327 aaPredicted RBP6.93□□□□□ -1.3
CRNDE-212ENST00000613942 C8orf76Q96K31 380 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 ZSCAN16Q9H4T2 348 aaPredicted RBP6.93□□□□□ -1.3
CRNDE-212ENST00000613942 MTMR7Q9Y216 660 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 DDX60LQ5H9U9 1706 aaKnown RBP6.93□□□□□ -1.3
CRNDE-212ENST00000613942 UQCRHLA0A096LP55 91 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 EGFRP00533 1210 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 UQCRHP07919 91 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 NDUFA8P51970 172 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 HMGN5P82970 282 aaKnown RBP6.93□□□□□ -1.3
CRNDE-212ENST00000613942 GABPAQ06546 454 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 SLC20A2Q08357 652 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 TROAPQ12815 778 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 RTN1Q16799 776 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 SHROOM1Q2M3G4 852 aaPredicted RBP6.93□□□□□ -1.3
CRNDE-212ENST00000613942 SASS6Q6UVJ0 657 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 RASGRP2Q7LDG7 609 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 CLEC10AQ8IUN9 316 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 DRC7Q8IY82 874 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 TMTC2Q8N394 836 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 FANCBQ8NB91 859 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 TRIM5Q9C035 493 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 VPS33BQ9H267 617 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 FAM13BQ9NYF5 915 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 RCOR1Q9UKL0 485 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 CFAP45Q9UL16 551 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 FER1L6Q2WGJ9 1857 aa6.93□□□□□ -1.3
CRNDE-212ENST00000613942 hCG_1642624A0A1W2PR95 340 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 TCP10L2B9ZVM9 353 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 DHX16O60231 1041 aaKnown RBP6.92□□□□□ -1.3
CRNDE-212ENST00000613942 PLEKHA8P1O95397 391 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 GUCY1A2P33402 732 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 TERF1P54274 439 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 NOLC1Q14978 699 aaKnown RBP eCLIP6.92□□□□□ -1.37e-8■■■■□ 24.9
CRNDE-212ENST00000613942 PTPN21Q16825 1174 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 SPECC1Q5M775 1068 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 CIAPIN1Q6FI81 312 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 CCDC186Q7Z3E2 898 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 IFNLR1Q8IU57 520 aaPredicted RBP6.92□□□□□ -1.3
CRNDE-212ENST00000613942 ZSCAN29Q8IWY8 852 aaPredicted RBP6.92□□□□□ -1.3
CRNDE-212ENST00000613942 OGFOD1Q8N543 542 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 FBXO18Q8NFZ0 1043 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 MTA3Q9BTC8 594 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 IDI2Q9BXS1 227 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 SLC26A6Q9BXS9 759 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 DNAJC18Q9H819 358 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 DDX19AQ9NUU7 478 aaKnown RBP6.92□□□□□ -1.3
CRNDE-212ENST00000613942 SERPINB13Q9UIV8 391 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 STX8Q9UNK0 236 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 MYH1P12882 1939 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 MYO3BQ8WXR4 1341 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 AKR1B1P15121 316 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 EIF6P56537 245 aaKnown RBP6.92□□□□□ -1.3
CRNDE-212ENST00000613942 DLGAP5Q15398 846 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 CCDC144BQ3MJ40 725 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 RBM26Q5T8P6 1007 aaKnown RBP6.92□□□□□ -1.3
CRNDE-212ENST00000613942 DPY19L2Q6NUT2 758 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 ARHGAP27Q6ZUM4 889 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 CATIPQ7Z7H3 387 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.92□□□□□ -1.3
CRNDE-212ENST00000613942 GJA3Q9Y6H8 435 aa6.92□□□□□ -1.3
CRNDE-212ENST00000613942 FOCADQ5VW36 1801 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 SHMT1P34896 483 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 DMTNQ08495 405 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 STK38Q15208 465 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 NBPF9Q3BBW0 867 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 RBM43Q6ZSC3 357 aaKnown RBP6.91□□□□□ -1.3
CRNDE-212ENST00000613942 NBPF11Q86T75 865 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 ENGASEQ8NFI3 743 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 CEP95Q96GE4 821 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 ALG1Q9BT22 464 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 GTPBP4Q9BZE4 634 aaKnown RBP6.91□□□□□ -1.3
CRNDE-212ENST00000613942 VEZTQ9HBM0 779 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 PRDM10Q9NQV6 1147 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 ECM29Q5VYK3 1845 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 ZNF541Q9H0D2 1346 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 KINO60870 393 aaKnown RBP6.91□□□□□ -1.3
CRNDE-212ENST00000613942 IFNAR1P17181 557 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 SF3A1Q15459 793 aaKnown RBP6.91□□□□□ -1.3
CRNDE-212ENST00000613942 PPP4R3BQ5MIZ7 849 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 MYSM1Q5VVJ2 828 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 CCDC73Q6ZRK6 1079 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 STAG2Q8N3U4 1231 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 CRACR2BQ8N4Y2 399 aaPredicted RBP6.91□□□□□ -1.3
CRNDE-212ENST00000613942 LINC00301Q8NCQ3 95 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 PNMA1Q8ND90 353 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 AGBL3Q8NEM8 1001 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 NEDD1Q8NHV4 660 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 PIBF1Q8WXW3 757 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 CLIC6Q96NY7 704 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 TMEM47Q9BQJ4 181 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 SDF4Q9BRK5 362 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 SYT17Q9BSW7 474 aa6.91□□□□□ -1.3
CRNDE-212ENST00000613942 KAT14Q9H8E8 782 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms