RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SLC25A27O95847 323 aa20.84■□□□□ 0.93
CSNK1E-215ENST00000612795 EVX2Q03828 476 aa20.84■□□□□ 0.93
CSNK1E-215ENST00000612795 KIAA1755Q5JYT7 1200 aa20.84■□□□□ 0.93
CSNK1E-215ENST00000612795 TINF2Q9BSI4 451 aa20.84■□□□□ 0.93
CSNK1E-215ENST00000612795 ZNF576Q9H609 170 aa20.84■□□□□ 0.93
CSNK1E-215ENST00000612795 NOP58Q9Y2X3 529 aaKnown RBP20.84■□□□□ 0.93
CSNK1E-215ENST00000612795 GBF1Q92538 1859 aa20.84■□□□□ 0.93
CSNK1E-215ENST00000612795 PGK2P07205 417 aa20.83■□□□□ 0.93
CSNK1E-215ENST00000612795 AKR1A1P14550 325 aa20.83■□□□□ 0.93
CSNK1E-215ENST00000612795 COL9A1P20849 921 aa20.83■□□□□ 0.93
CSNK1E-215ENST00000612795 ICA1Q05084 483 aa20.83■□□□□ 0.93
CSNK1E-215ENST00000612795 KCTD2Q14681 263 aa20.83■□□□□ 0.93
CSNK1E-215ENST00000612795 CLEC10AQ8IUN9 316 aa20.83■□□□□ 0.93
CSNK1E-215ENST00000612795 SLC44A5Q8NCS7 719 aa20.83■□□□□ 0.93
CSNK1E-215ENST00000612795 TIFAQ96CG3 184 aa20.83■□□□□ 0.93
CSNK1E-215ENST00000612795 VCPKMTQ9H867 229 aa20.83■□□□□ 0.93
CSNK1E-215ENST00000612795 STARD7Q9NQZ5 370 aa20.83■□□□□ 0.93
CSNK1E-215ENST00000612795 SWAP70Q9UH65 585 aa20.83■□□□□ 0.93
CSNK1E-215ENST00000612795 MUC3AQ02505 3323 aa20.82■□□□□ 0.92
CSNK1E-215ENST00000612795 DCDC2CA8MYV0 355 aa20.82■□□□□ 0.92
CSNK1E-215ENST00000612795 WDR46O15213 610 aaKnown RBP20.82■□□□□ 0.92
CSNK1E-215ENST00000612795 TMEM132BQ14DG7 1078 aa20.82■□□□□ 0.92
CSNK1E-215ENST00000612795 ZKSCAN2Q63HK3 967 aa20.82■□□□□ 0.92
CSNK1E-215ENST00000612795 SDR42E1Q8WUS8 393 aa20.82■□□□□ 0.92
CSNK1E-215ENST00000612795 LENG1Q96BZ8 264 aaPredicted RBP20.82■□□□□ 0.92
CSNK1E-215ENST00000612795 GAS2L1Q99501 681 aaPredicted RBP20.82■□□□□ 0.92
CSNK1E-215ENST00000612795 CNPY2Q9Y2B0 182 aa20.82■□□□□ 0.92
CSNK1E-215ENST00000612795 MYH7P12883 1935 aa20.82■□□□□ 0.92
CSNK1E-215ENST00000612795 MCM3APO60318 1980 aa20.81■□□□□ 0.92
CSNK1E-215ENST00000612795 TTF1Q15361 905 aaPredicted RBP20.81■□□□□ 0.92
CSNK1E-215ENST00000612795 SLC9C2Q5TAH2 1124 aa20.81■□□□□ 0.92
CSNK1E-215ENST00000612795 AACSQ86V21 672 aa20.81■□□□□ 0.92
CSNK1E-215ENST00000612795 NUP133Q8WUM0 1156 aa20.81■□□□□ 0.92
CSNK1E-215ENST00000612795 TMX2Q9Y320 296 aa20.81■□□□□ 0.92
CSNK1E-215ENST00000612795 CYP2D6P10635 497 aa20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 AKR1B1P15121 316 aa20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 PDE6AP16499 860 aa20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 TAL1P17542 331 aaPredicted RBP20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 FAAP100Q0VG06 881 aa20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 CCDC129Q6ZRS4 1044 aa20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 ANKRD33Q7Z3H0 272 aa20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 RIOX2Q8IUF8 465 aa20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 PPM1EQ8WY54 764 aa20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 TOX2Q96NM4 488 aa20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 DCP1AQ9NPI6 582 aaPredicted RBP20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 DIS3Q9Y2L1 958 aaKnown RBP20.8■□□□□ 0.92
CSNK1E-215ENST00000612795 ADAMTS4O75173 837 aa20.79■□□□□ 0.92
CSNK1E-215ENST00000612795 ZNF865P0CJ78 1059 aaPredicted RBP20.79■□□□□ 0.92
CSNK1E-215ENST00000612795 ACLYP53396 1101 aa20.79■□□□□ 0.92
CSNK1E-215ENST00000612795 ZNF792Q3KQV3 632 aa20.79■□□□□ 0.92
CSNK1E-215ENST00000612795 CCDC174Q6PII3 467 aa20.79■□□□□ 0.92
CSNK1E-215ENST00000612795 ERC1Q8IUD2 1116 aa20.79■□□□□ 0.92
CSNK1E-215ENST00000612795 DYNLL2Q96FJ2 89 aa20.79■□□□□ 0.92
CSNK1E-215ENST00000612795 TSEN34Q9BSV6 310 aaKnown RBP20.79■□□□□ 0.92
CSNK1E-215ENST00000612795 ZNF532Q9HCE3 1301 aa20.78■□□□□ 0.92
CSNK1E-215ENST00000612795 SYNRGQ9UMZ2 1314 aa20.78■□□□□ 0.92
CSNK1E-215ENST00000612795 TIMP1P01033 207 aa20.78■□□□□ 0.92
CSNK1E-215ENST00000612795 COPB2P35606 906 aa20.78■□□□□ 0.92
CSNK1E-215ENST00000612795 FTSJ3Q8IY81 847 aaKnown RBP20.78■□□□□ 0.92
CSNK1E-215ENST00000612795 LCORLQ8N3X6 602 aa20.78■□□□□ 0.92
CSNK1E-215ENST00000612795 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.78■□□□□ 0.921e-6■■■□□ 18.9
CSNK1E-215ENST00000612795 FBXO28Q9NVF7 368 aa20.78■□□□□ 0.92
CSNK1E-215ENST00000612795 MROH7Q68CQ1 1323 aa20.78■□□□□ 0.92
CSNK1E-215ENST00000612795 MOXD2PA6NHM9 499 aa20.77■□□□□ 0.92
CSNK1E-215ENST00000612795 RAD21O60216 631 aa20.77■□□□□ 0.92
CSNK1E-215ENST00000612795 STAT3P40763 770 aa20.77■□□□□ 0.92
CSNK1E-215ENST00000612795 PPIGQ13427 754 aaKnown RBP eCLIP20.77■□□□□ 0.924e-7■■□□□ 12.5
CSNK1E-215ENST00000612795 ITPRIPQ8IWB1 547 aa20.77■□□□□ 0.92
CSNK1E-215ENST00000612795 THEGQ9P2T0 379 aa20.77■□□□□ 0.92
CSNK1E-215ENST00000612795 EXOC6BQ9Y2D4 811 aa20.77■□□□□ 0.92
CSNK1E-215ENST00000612795 SIAH1Q8IUQ4 282 aa20.76■□□□□ 0.91
CSNK1E-215ENST00000612795 AMOTL1Q8IY63 956 aa20.76■□□□□ 0.91
CSNK1E-215ENST00000612795 ATXN2LQ8WWM7 1075 aaKnown RBP20.76■□□□□ 0.91
CSNK1E-215ENST00000612795 CCDC17Q96LX7 622 aa20.76■□□□□ 0.91
CSNK1E-215ENST00000612795 GLT1D1Q96MS3 346 aa20.76■□□□□ 0.91
CSNK1E-215ENST00000612795 DNAJC2Q99543 621 aaKnown RBP20.76■□□□□ 0.91
CSNK1E-215ENST00000612795 GOPCQ9HD26 462 aa20.76■□□□□ 0.91
CSNK1E-215ENST00000612795 ZHX1Q9UKY1 873 aaPredicted RBP20.76■□□□□ 0.91
CSNK1E-215ENST00000612795 TBX21Q9UL17 535 aa20.76■□□□□ 0.91
CSNK1E-215ENST00000612795 ADAMTS5Q9UNA0 930 aa20.76■□□□□ 0.91
CSNK1E-215ENST00000612795 MYH4Q9Y623 1939 aa20.75■□□□□ 0.91
CSNK1E-215ENST00000612795 APBB1O00213 710 aa20.75■□□□□ 0.91
CSNK1E-215ENST00000612795 MFSD5Q6N075 450 aa20.75■□□□□ 0.91
CSNK1E-215ENST00000612795 IL27Q8NEV9 243 aa20.75■□□□□ 0.91
CSNK1E-215ENST00000612795 PBX4Q9BYU1 374 aa20.75■□□□□ 0.91
CSNK1E-215ENST00000612795 PRDM12Q9H4Q4 367 aa20.75■□□□□ 0.91
CSNK1E-215ENST00000612795 ARMT1Q9H993 441 aa20.75■□□□□ 0.91
CSNK1E-215ENST00000612795 ZNF214Q9UL59 606 aaPredicted RBP20.75■□□□□ 0.91
CSNK1E-215ENST00000612795 FAM184BQ9ULE4 1060 aa20.75■□□□□ 0.91
CSNK1E-215ENST00000612795 PPP1R9AQ9ULJ8 1098 aa20.75■□□□□ 0.91
CSNK1E-215ENST00000612795 GOLIM4O00461 696 aa20.74■□□□□ 0.91
CSNK1E-215ENST00000612795 VWA5AO00534 786 aa20.74■□□□□ 0.91
CSNK1E-215ENST00000612795 EEF2P13639 858 aaKnown RBP20.74■□□□□ 0.91
CSNK1E-215ENST00000612795 PBX2P40425 430 aa20.74■□□□□ 0.91
CSNK1E-215ENST00000612795 KCNA10Q16322 511 aa20.74■□□□□ 0.91
CSNK1E-215ENST00000612795 MSL3Q8N5Y2 521 aaKnown RBP20.74■□□□□ 0.91
CSNK1E-215ENST00000612795 IL1RAPL2Q9NP60 686 aa20.74■□□□□ 0.91
CSNK1E-215ENST00000612795 GREB1LQ9C091 1923 aaPredicted RBP20.74■□□□□ 0.91
CSNK1E-215ENST00000612795 SYNGAP1Q96PV0 1343 aa20.74■□□□□ 0.91
CSNK1E-215ENST00000612795 TCRBV5S4A2TA0A5A2 114 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms