RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 MAPK4P31152 587 aa21.36■■□□□ 1.01
SEMA3B-211ENST00000612509 CCNA1P78396 465 aa21.36■■□□□ 1.01
SEMA3B-211ENST00000612509 SAMD1Q6SPF0 538 aaPredicted RBP21.36■■□□□ 1.01
SEMA3B-211ENST00000612509 MB21D1Q8N884 522 aa21.36■■□□□ 1.01
SEMA3B-211ENST00000612509 SH3TC2Q8TF17 1288 aa21.36■■□□□ 1.01
SEMA3B-211ENST00000612509 PPP1R9AQ9ULJ8 1098 aa21.36■■□□□ 1.01
SEMA3B-211ENST00000612509 NOVP48745 357 aa21.35■■□□□ 1.01
SEMA3B-211ENST00000612509 PTH1RQ03431 593 aa21.35■■□□□ 1.01
SEMA3B-211ENST00000612509 IRF5Q13568 498 aa21.35■■□□□ 1.01
SEMA3B-211ENST00000612509 ERICH6BQ5W0A0 696 aa21.35■■□□□ 1.01
SEMA3B-211ENST00000612509 SLFN13Q68D06 897 aa21.35■■□□□ 1.01
SEMA3B-211ENST00000612509 CCAR1Q8IX12 1150 aaKnown RBP21.35■■□□□ 1.01
SEMA3B-211ENST00000612509 SLAIN1Q8ND83 568 aa21.35■■□□□ 1.01
SEMA3B-211ENST00000612509 NKX2-3Q8TAU0 364 aa21.35■■□□□ 1.01
SEMA3B-211ENST00000612509 ZNF236Q9UL36 1845 aa21.34■■□□□ 1.01
SEMA3B-211ENST00000612509 GRK4P32298 578 aa21.34■■□□□ 1.01
SEMA3B-211ENST00000612509 NT5C2P49902 561 aa21.34■■□□□ 1.01
SEMA3B-211ENST00000612509 GPR142Q7Z601 462 aa21.34■■□□□ 1.01
SEMA3B-211ENST00000612509 NBPF11Q86T75 865 aa21.34■■□□□ 1.01
SEMA3B-211ENST00000612509 SOCS4Q8WXH5 440 aa21.34■■□□□ 1.01
SEMA3B-211ENST00000612509 ESR2Q92731 530 aa21.34■■□□□ 1.01
SEMA3B-211ENST00000612509 TCP11L1Q9NUJ3 509 aa21.34■■□□□ 1.01
SEMA3B-211ENST00000612509 PLEKHH3Q7Z736 793 aa21.33■■□□□ 1.01
SEMA3B-211ENST00000612509 SLF1Q9BQI6 1058 aa21.33■■□□□ 1.01
SEMA3B-211ENST00000612509 SPATC1LQ9H0A9 340 aa21.33■■□□□ 1.01
SEMA3B-211ENST00000612509 CWC22Q9HCG8 908 aaKnown RBP21.33■■□□□ 1.01
SEMA3B-211ENST00000612509 PPP4R2Q9NY27 417 aa21.33■■□□□ 1.01
SEMA3B-211ENST00000612509 GJD2Q9UKL4 321 aa21.33■■□□□ 1.01
SEMA3B-211ENST00000612509 ADAMTS5Q9UNA0 930 aa21.33■■□□□ 1.01
SEMA3B-211ENST00000612509 U3KPZ7 1027 aaPredicted RBP21.33■■□□□ 1.01
SEMA3B-211ENST00000612509 ADCY3O60266 1144 aa21.32■■□□□ 1
SEMA3B-211ENST00000612509 WDR78Q5VTH9 848 aa21.32■■□□□ 1
SEMA3B-211ENST00000612509 GMCL1Q96IK5 515 aa21.32■■□□□ 1
SEMA3B-211ENST00000612509 ESYT1Q9BSJ8 1104 aa21.32■■□□□ 1
SEMA3B-211ENST00000612509 MOV10L1Q9BXT6 1211 aaKnown RBP21.32■■□□□ 1
SEMA3B-211ENST00000612509 CENPFP49454 3210 aa21.31■■□□□ 1
SEMA3B-211ENST00000612509 B4E1Z4 1266 aa21.31■■□□□ 1
SEMA3B-211ENST00000612509 VWA5AO00534 786 aa21.31■■□□□ 1
SEMA3B-211ENST00000612509 KDM4AO75164 1064 aa21.31■■□□□ 1
SEMA3B-211ENST00000612509 BMP3P12645 472 aa21.31■■□□□ 1
SEMA3B-211ENST00000612509 ELNP15502 786 aa21.31■■□□□ 1
SEMA3B-211ENST00000612509 TMEM132BQ14DG7 1078 aa21.31■■□□□ 1
SEMA3B-211ENST00000612509 RASGRP2Q7LDG7 609 aa21.31■■□□□ 1
SEMA3B-211ENST00000612509 REPS2Q8NFH8 660 aa21.31■■□□□ 1
SEMA3B-211ENST00000612509 PXYLP1Q8TE99 480 aa21.31■■□□□ 1
SEMA3B-211ENST00000612509 NUDT12Q9BQG2 462 aa21.31■■□□□ 1
SEMA3B-211ENST00000612509 CYP21A2P08686 494 aa21.3■■□□□ 1
SEMA3B-211ENST00000612509 TOP1P11387 765 aaKnown RBP21.3■■□□□ 1
SEMA3B-211ENST00000612509 SLC1A4P43007 532 aa21.3■■□□□ 1
SEMA3B-211ENST00000612509 PLS1Q14651 629 aa21.3■■□□□ 1
SEMA3B-211ENST00000612509 MORN1Q5T089 497 aa21.3■■□□□ 1
SEMA3B-211ENST00000612509 SHCBP1Q8NEM2 672 aa21.3■■□□□ 1
SEMA3B-211ENST00000612509 TMEM47Q9BQJ4 181 aa21.3■■□□□ 1
SEMA3B-211ENST00000612509 KRT23Q9C075 422 aa21.3■■□□□ 1
SEMA3B-211ENST00000612509 CNNM2Q9H8M5 875 aa21.3■■□□□ 1
SEMA3B-211ENST00000612509 FEM1BQ9UK73 627 aa21.3■■□□□ 1
SEMA3B-211ENST00000612509 ISY1Q9ULR0 285 aaKnown RBP21.3■■□□□ 1
SEMA3B-211ENST00000612509 CDC45O75419 566 aa21.29■■□□□ 1
SEMA3B-211ENST00000612509 MYCP01106 439 aaPredicted RBP21.29■■□□□ 1
SEMA3B-211ENST00000612509 ERCC3P19447 782 aa21.29■■□□□ 1
SEMA3B-211ENST00000612509 CYP2B6P20813 491 aa21.29■■□□□ 1
SEMA3B-211ENST00000612509 MCCP23508 829 aa21.29■■□□□ 1
SEMA3B-211ENST00000612509 RCSD1Q6JBY9 416 aa21.29■■□□□ 1
SEMA3B-211ENST00000612509 IQCA1Q86XH1 822 aa21.29■■□□□ 1
SEMA3B-211ENST00000612509 USP6NLQ92738 828 aa21.29■■□□□ 1
SEMA3B-211ENST00000612509 MAP4K1Q92918 833 aa21.29■■□□□ 1
SEMA3B-211ENST00000612509 ZKSCAN3Q9BRR0 538 aa21.29■■□□□ 1
SEMA3B-211ENST00000612509 IVNS1ABPQ9Y6Y0 642 aa21.29■■□□□ 1
SEMA3B-211ENST00000612509 INHAP05111 366 aa21.28■■□□□ 1
SEMA3B-211ENST00000612509 RGS2P41220 211 aa21.28■■□□□ 1
SEMA3B-211ENST00000612509 STAT2P52630 851 aa21.28■■□□□ 1
SEMA3B-211ENST00000612509 UBXN2AP68543 259 aa21.28■■□□□ 1
SEMA3B-211ENST00000612509 GRB14Q14449 540 aa21.28■■□□□ 1
SEMA3B-211ENST00000612509 KIAA1211Q6ZU35 1233 aa21.28■■□□□ 1
SEMA3B-211ENST00000612509 PRPF38AQ8NAV1 312 aaKnown RBP21.28■■□□□ 1
SEMA3B-211ENST00000612509 DCAF4Q8WV16 495 aa21.28■■□□□ 1
SEMA3B-211ENST00000612509 KIFC2Q96AC6 838 aa21.28■■□□□ 1
SEMA3B-211ENST00000612509 CHMP4CQ96CF2 233 aa21.28■■□□□ 1
SEMA3B-211ENST00000612509 APBA2Q99767 749 aa21.28■■□□□ 1
SEMA3B-211ENST00000612509 LSG1Q9H089 658 aaKnown RBP21.28■■□□□ 1
SEMA3B-211ENST00000612509 BIN2Q9UBW5 565 aaPredicted RBP21.28■■□□□ 1
SEMA3B-211ENST00000612509 ZNF214Q9UL59 606 aaPredicted RBP21.28■■□□□ 1
SEMA3B-211ENST00000612509 MTMR7Q9Y216 660 aa21.28■■□□□ 1
SEMA3B-211ENST00000612509 RBM8AQ9Y5S9 174 aaKnown RBP21.28■■□□□ 1
SEMA3B-211ENST00000612509 KIAA0100Q14667 2235 aaKnown RBP21.27■■□□□ 1
SEMA3B-211ENST00000612509 POTEFA5A3E0 1075 aa21.27■■□□□ 1
SEMA3B-211ENST00000612509 SLC15A5A6NIM6 579 aa21.27■■□□□ 1
SEMA3B-211ENST00000612509 TMEM232C9JQI7 657 aa21.27■■□□□ 1
SEMA3B-211ENST00000612509 HMGCRP04035 888 aa21.27■■□□□ 1
SEMA3B-211ENST00000612509 PTPREP23469 700 aa21.27■■□□□ 1
SEMA3B-211ENST00000612509 MAP2K5Q13163 448 aa21.27■■□□□ 1
SEMA3B-211ENST00000612509 MTFR1Q15390 333 aa21.27■■□□□ 1
SEMA3B-211ENST00000612509 CCDC96Q2M329 555 aa21.27■■□□□ 1
SEMA3B-211ENST00000612509 KCTD1Q719H9 257 aa21.27■■□□□ 1
SEMA3B-211ENST00000612509 NCAPG2Q86XI2 1143 aa21.27■■□□□ 1
SEMA3B-211ENST00000612509 TTC14Q96N46 770 aa21.27■■□□□ 1
SEMA3B-211ENST00000612509 SLC25A27O95847 323 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 XRCC5P13010 732 aaKnown RBP21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 RGS19P49795 217 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 CCDC178Q5BJE1 867 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms