RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-233	ENST00000612121	NOP58	Q9Y2X3	529 aa	Known RBP	18.82	■□□□□ 0.6
LTBP4-233	ENST00000612121	NAV1	Q8NEY1	1877 aa		18.82	■□□□□ 0.6
LTBP4-233	ENST00000612121	ADAMTS4	O75173	837 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	BCAR3	O75815	825 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	SLC25A27	O95847	323 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	TIMP1	P01033	207 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	PGK2	P07205	417 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	ZNF792	Q3KQV3	632 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	TMEM179	Q6ZVK1	233 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	SPICE1	Q8N0Z3	855 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	SLC44A5	Q8NCS7	719 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	CLUAP1	Q96AJ1	413 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	LENG1	Q96BZ8	264 aa	Predicted RBP	18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	MMP19	Q99542	508 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	TSEN34	Q9BSV6	310 aa	Known RBP	18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	ADAMTS5	Q9UNA0	930 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	DIS3	Q9Y2L1	958 aa	Known RBP	18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	PLXNA1	Q9UIW2	1896 aa		18.81	■□□□□ 0.6
LTBP4-233	ENST00000612121	COL11A1	P12107	1806 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	MAGEB6P1	A0A0J9YX57	407 aa		18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	ZNF316	A6NFI3	1004 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	DCDC2C	A8MYV0	355 aa		18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	AKR1A1	P14550	325 aa		18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	AKNAD1	Q5T1N1	836 aa		18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	C16orf59	Q7L2K0	433 aa		18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	ASB2	Q96Q27	587 aa		18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	PBX4	Q9BYU1	374 aa		18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	VCPKMT	Q9H867	229 aa		18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	MCM9	Q9NXL9	1143 aa		18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	TBX21	Q9UL17	535 aa		18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	TMX2	Q9Y320	296 aa		18.8	■□□□□ 0.6
LTBP4-233	ENST00000612121	CHD7	Q9P2D1	2997 aa		18.79	■□□□□ 0.6
LTBP4-233	ENST00000612121	PBX2	P40425	430 aa		18.79	■□□□□ 0.6
LTBP4-233	ENST00000612121	ACLY	P53396	1101 aa		18.79	■□□□□ 0.6
LTBP4-233	ENST00000612121	RASIP1	Q5U651	963 aa		18.79	■□□□□ 0.6
LTBP4-233	ENST00000612121	MFSD5	Q6N075	450 aa		18.79	■□□□□ 0.6
LTBP4-233	ENST00000612121	RIOX2	Q8IUF8	465 aa		18.79	■□□□□ 0.6
LTBP4-233	ENST00000612121	CLEC10A	Q8IUN9	316 aa		18.79	■□□□□ 0.6
LTBP4-233	ENST00000612121	PPM1E	Q8WY54	764 aa		18.79	■□□□□ 0.6
LTBP4-233	ENST00000612121	GAS2L1	Q99501	681 aa	Predicted RBP	18.79	■□□□□ 0.6
LTBP4-233	ENST00000612121	STARD7	Q9NQZ5	370 aa		18.79	■□□□□ 0.6
LTBP4-233	ENST00000612121	GRXCR1	A8MXD5	290 aa		18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	TMEM240	Q5SV17	173 aa		18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	SAMD1	Q6SPF0	538 aa	Predicted RBP	18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	TMEM57	Q8N5G2	664 aa		18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	KLHDC9	Q8NEP7	349 aa		18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	NUP133	Q8WUM0	1156 aa		18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	FRAT1	Q92837	279 aa	Predicted RBP	18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	PRDM12	Q9H4Q4	367 aa		18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	ARHGEF10L	Q9HCE6	1279 aa		18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	THEG	Q9P2T0	379 aa		18.78	■□□□□ 0.6
LTBP4-233	ENST00000612121	WDR46	O15213	610 aa	Known RBP	18.77	■□□□□ 0.6
LTBP4-233	ENST00000612121	CYP2D6	P10635	497 aa		18.77	■□□□□ 0.6
LTBP4-233	ENST00000612121	ICA1	Q05084	483 aa		18.77	■□□□□ 0.6
LTBP4-233	ENST00000612121	KCTD2	Q14681	263 aa		18.77	■□□□□ 0.6
LTBP4-233	ENST00000612121	ADAMTS19	Q8TE59	1207 aa		18.77	■□□□□ 0.6
LTBP4-233	ENST00000612121	DYNLL2	Q96FJ2	89 aa		18.77	■□□□□ 0.6
LTBP4-233	ENST00000612121	DCP1A	Q9NPI6	582 aa	Predicted RBP	18.77	■□□□□ 0.6
LTBP4-233	ENST00000612121	SWAP70	Q9UH65	585 aa		18.77	■□□□□ 0.6
LTBP4-233	ENST00000612121	SYNRG	Q9UMZ2	1314 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	MOXD2P	A6NHM9	499 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	AKR1B1	P15121	316 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	STAT3	P40763	770 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	PPIG	Q13427	754 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	ADGRE1	Q14246	886 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	KCNA10	Q16322	511 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	SDR42E1	Q8WUS8	393 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	SH2D4A	Q9H788	454 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	C1orf115	Q9H7X2	142 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	FBXO28	Q9NVF7	368 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	CNPY2	Q9Y2B0	182 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	REV3L	O60673	3130 aa		18.76	■□□□□ 0.59
LTBP4-233	ENST00000612121	MYH8	P13535	1937 aa		18.75	■□□□□ 0.59
LTBP4-233	ENST00000612121	VWA5A	O00534	786 aa		18.75	■□□□□ 0.59
LTBP4-233	ENST00000612121	PDE6A	P16499	860 aa		18.75	■□□□□ 0.59
LTBP4-233	ENST00000612121	PLA2G5	P39877	138 aa		18.75	■□□□□ 0.59
LTBP4-233	ENST00000612121	CDK7	P50613	346 aa		18.75	■□□□□ 0.59
LTBP4-233	ENST00000612121	MRPS5	P82675	430 aa	Known RBP	18.75	■□□□□ 0.59
LTBP4-233	ENST00000612121	SLC9C2	Q5TAH2	1124 aa		18.75	■□□□□ 0.59
LTBP4-233	ENST00000612121	CCDC129	Q6ZRS4	1044 aa		18.75	■□□□□ 0.59
LTBP4-233	ENST00000612121	REPS2	Q8NFH8	660 aa		18.75	■□□□□ 0.59
LTBP4-233	ENST00000612121	ZNF214	Q9UL59	606 aa	Predicted RBP	18.75	■□□□□ 0.59
LTBP4-233	ENST00000612121	ELP1	O95163	1332 aa		18.74	■□□□□ 0.59
LTBP4-233	ENST00000612121	MYADML2	A6NDP7	307 aa		18.74	■□□□□ 0.59
LTBP4-233	ENST00000612121	SNAI1	O95863	264 aa	Predicted RBP	18.74	■□□□□ 0.59
LTBP4-233	ENST00000612121	CSF2RA	P15509	400 aa		18.74	■□□□□ 0.59
LTBP4-233	ENST00000612121	CCDC174	Q6PII3	467 aa		18.74	■□□□□ 0.59
LTBP4-233	ENST00000612121	MSL3	Q8N5Y2	521 aa	Known RBP	18.74	■□□□□ 0.59
LTBP4-233	ENST00000612121	UHRF1	Q96T88	793 aa	Predicted RBP	18.74	■□□□□ 0.59
LTBP4-233	ENST00000612121	FAM184B	Q9ULE4	1060 aa		18.74	■□□□□ 0.59
LTBP4-233	ENST00000612121	PPP1R9A	Q9ULJ8	1098 aa		18.74	■□□□□ 0.59
LTBP4-233	ENST00000612121	MROH7	Q68CQ1	1323 aa		18.74	■□□□□ 0.59
LTBP4-233	ENST00000612121	XIRP2	A4UGR9	3374 aa		18.73	■□□□□ 0.59
LTBP4-233	ENST00000612121	DUSP11	O75319	330 aa	Known RBP	18.73	■□□□□ 0.59
LTBP4-233	ENST00000612121	CST5	P28325	142 aa	Predicted RBP	18.73	■□□□□ 0.59
LTBP4-233	ENST00000612121	COPB2	P35606	906 aa		18.73	■□□□□ 0.59
LTBP4-233	ENST00000612121	TTF1	Q15361	905 aa	Predicted RBP	18.73	■□□□□ 0.59
LTBP4-233	ENST00000612121	CCDC85B	Q15834	202 aa	Predicted RBP	18.73	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms